mRNA_M-pyrifera_M_contig85690.19979.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85690.19979.1 vs. uniprot
Match: A0A7C2P2F4_9PLAN (DUF4392 domain-containing protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2P2F4_9PLAN) HSP 1 Score: 217 bits (552), Expect = 6.530e-66 Identity = 123/280 (43.93%), Postives = 160/280 (57.14%), Query Frame = 1 Query: 1 VPDAPMPAAETDGPLGATLLADVLSQNGIESRIITDESCASAIRTAMTACGVDLELF-ACPIGPILSRGWREDLWRSDFGRSITHLISVERVGP--------CLHESPSDA-------------RCRNMRGQPIDEWSADLYRLFEE---SPPHVRTIGIGDGGNEIGMGTF-WADITQNRQPPRHA---CRTRTDWTILAGVSDWGAMALATAVTLKRSDVSPLVSWTADRIQHALEQMVHRGPSIDGCTQLAEPTVDGLPFATYVQPWELIRRELGLD 753 +P PAAETDGP GA LLA L G++ R++TDE C +A+ A G+ + CP+ P + GW ++L S++H+I VERVGP L + S A RC NMRG+ I+ W+A L+RL E P V+TIGIGDGGNE+G+G W ++ P CR TDWTILAGVS+WGAMALA + R L W D + L Q+V RGP++DG T+L EPTVDGLPF TY+QPWE +R+ LGL+ Sbjct: 64 IPAGQPPAAETDGPPGAALLAATLRACGMDVRLVTDEPCRTAVTVAAELYGLPSAVVECCPVLPAEADGWLQNL---AIDPSLSHVICVERVGPSHTPASWGALRVAVSAAGRFANAVPDEHWDRCHNMRGEIIEGWTAPLHRLVERIAGERPGVKTIGIGDGGNELGLGAVPWRELRDRLSGPAAPLVPCRIATDWTILAGVSNWGAMALAAGIAHGRGCTEALRPWNRDAEEQRLRQLVARGPAVDGVTRLREPTVDGLPFLTYIQPWEGMRQRLGLE 340
BLAST of mRNA_M-pyrifera_M_contig85690.19979.1 vs. uniprot
Match: A0A257WQB1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium 12-60-4 TaxID=1970541 RepID=A0A257WQB1_9BACT) HSP 1 Score: 215 bits (547), Expect = 4.370e-65 Identity = 126/276 (45.65%), Postives = 164/276 (59.42%), Query Frame = 1 Query: 1 VPDAPMPAAETDGPLGATLLADVLSQNGIESRIITDESCASAIRTAMTACGVDLE-LFACPIGPILSRGWREDLWRSDFGRSITHLISVERVGPCLH-ESPSDA----------------RCRNMRGQPIDEWSADLYRLFE---ESPPHVRTIGIGDGGNEIGMGTF-WADITQNRQPPRHA---CRTRTDWTILAGVSDWGAMALATAVTLKRSDVSPLVSWTADRIQHALEQMVHRGPSIDGCTQLAEPTVDGLPFATYVQPWELIRRELGLD 753 VP PAAETDGP+GA LA L G++ ++TD C A++TA A + + + ACP R W E L+ G +TH+ISVERVGP ++ SDA RC NMRG+ IDE+S LY E + P VRT+GIGDGGNEIGMGT ++++ + P+ + CR TDWTILAGVS+WGAMALA AV +R + L + + L+ +V +GP++DG T+L EPTVDGLPF TY+QPWE IR L LD Sbjct: 71 VPRGTPPAAETDGPIGAAFLAASLLDCGMKPLLLTDRWCWKAVQTAAAAYRLPPDAVVACPDSESEVRNWSERLFNEQGGPPLTHVISVERVGPAHRPDTWSDAALAGSFRNRVPEGNWNRCHNMRGEIIDEFSPPLYAAIEWVSKHHPGVRTVGIGDGGNEIGMGTIPYSELRKRLVEPQASQIPCRIATDWTILAGVSNWGAMALAAAVCWQRGCLDSLRAADRRTEELRLKSLVEQGPAVDGVTRLQEPTVDGLPFVTYLQPWETIRTRLQLD 346
BLAST of mRNA_M-pyrifera_M_contig85690.19979.1 vs. uniprot
Match: A0A517ZDK6_9PLAN (Uncharacterized protein n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZDK6_9PLAN) HSP 1 Score: 213 bits (541), Expect = 2.630e-64 Identity = 118/276 (42.75%), Postives = 162/276 (58.70%), Query Frame = 1 Query: 19 PAAETDGPLGATLLADVLSQNGIESRIITDESCASAIRTAMTACGVD-LELFACPIGPILSRGWREDLWRSDFGRSITHLISVERVGPC----------------LHES----PSDARCRN--MRGQPIDEWSADLYRLFEESPPH--VRTIGIGDGGNEIGMGTF-WADITQNRQP----PRHACRTRTDWTILAGVSDWGAMALATAVTLKRSDVSPLVSWTADRIQHALEQMVHRGPSIDGCTQLAEPTVDGLPFATYVQPWELIRRELGLDT 756 P AETDGP GA LLAD+L+Q G +ITD+ C+ A+ T CG+D + + +CP+ P + + + LW + ++HLI++ER+GP L E P + R R+ MRG+ +D +A L+RLFEE+ +RT+GI DGGNE+GMGT W D+T +R P PR CRTRTDWTI+ G S+WG ALA A ++ V L WT R+ LE +V GP++DGCT+ E TVDGLPF T++Q W I G +T Sbjct: 62 PVAETDGPPGAVLLADILTQLGARVWLITDDPCSGALEAGRTFCGLDDVPVVSCPVAPEAAEPFLQRLWTDQWQDGLSHLIAIERIGPSHTPTSLTAQPRSGPPPLEEFERLVPPENRDRHHTMRGEIMDASTAPLHRLFEEADRRSDMRTVGICDGGNELGMGTLLWEDVT-SRLPEPIGPRIVCRTRTDWTIIGGTSNWGGFALAAATAMQAGRVDLLRDWTVARMSDLLEDLVAHGPAVDGCTRRHEATVDGLPFETFIQLWIEILHRAGGET 336
BLAST of mRNA_M-pyrifera_M_contig85690.19979.1 vs. uniprot
Match: UPI001983392E (DUF4392 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI001983392E) HSP 1 Score: 210 bits (535), Expect = 6.500e-63 Identity = 123/286 (43.01%), Postives = 157/286 (54.90%), Query Frame = 1 Query: 1 VPDAPMPAAETDGPLGATLLADVLSQNGIESRIITDESCASAIRTAMTACGVDLELFACPIGPILSRGWREDLWRSDFGRSITHLISVERVGPC-------------------------------LHESPSDA--RCRNMRGQPIDEWSADLYRLFEESP---PHVRTIGIGDGGNEIGMGTF-WADITQN---RQPPRHACRTRTDWTILAGVSDWGAMALATAVTLKRSDVSPLVSWTADRIQHALEQMVHRGPSIDGCTQLAEPTVDGLPFATYVQPWELIRR 738 +P A PAAETDGP G+ LLA L GIE+ +ITD CA A+R A A G+ + + P+ + W ++ W S+F +THL+++ERVGP L + S+ RC NMRG ID +A L+ LFE P P RTIGIGDGGNEIGMG WA++ + Q R CR D+ I+AG S+WGAMALA V L R + L WT +R + LE +V GP++DG T L E TVDGLPF TY+QPWE I R Sbjct: 88 IPHAQPPAAETDGPPGSLLLAHCLQALGIEAAVITDAPCAPAVRAA--ADGIGFPVNRVLVSPLHAESWCDEFWNSEFAGGLTHLVAIERVGPSHTPASIGRQGTGDESQGISNLKSEISTLDSFLADVASEHHDRCHNMRGVCIDGHTAPLHLLFERLPSRHPAARTIGIGDGGNEIGMGAIPWAELRRRLSGEQAGRVPCRIACDFNIVAGTSNWGAMALAAGVCLLRDRLDVLQPWTRERHREWLEHLVANGPAVDGVTGLREATVDGLPFLTYIQPWEGILR 371
BLAST of mRNA_M-pyrifera_M_contig85690.19979.1 vs. uniprot
Match: UPI00199AE596 (DUF4392 domain-containing protein n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI00199AE596) HSP 1 Score: 208 bits (530), Expect = 1.560e-62 Identity = 128/289 (44.29%), Postives = 161/289 (55.71%), Query Frame = 1 Query: 1 VPDAPMPAAETDGPLGATLLADVLSQNGIESRIITDESCASAIRTAMTACGVDLELFACPIGPILSRGWREDLWRSDF--GRS----ITHLISVERVGPCLHESPSDAR---------------------------CRNMRGQPIDEWSADLYRLFE--ESPPHVRTIGIGDGGNEIGMGTF-WADITQNRQPP---RHACRTRTDWTILAGVSDWGAMALATAVTLKRSDVSPLVSWTADRIQHALEQMVHRGPSIDGCTQLAEPTVDGLPFATYVQPWELIRRELGL 750 +P A P+AETDGP GA LLA L+ G+ +I+TDE C SA+ A G+ C I SRG ++ W D G S +THLIS+ERVGP H S S C NMRG+ ID +A L+RLFE + +RTIGIGDGGNEIGMG+ W ++ + P R CR TDWTI+AGVS+WG ALA A L + V WT + ALE++V GP++DG T+L EPTVDGLPF TY+QPWE +RR +GL Sbjct: 60 IPGATPPSAETDGPPGAALLAAALTHAGLSVQIVTDEPCRSAVEVAARELGLAQAEIVCTIPT--SRG-EQEAWCIDMLNGTSRQQPLTHLISLERVGPS-HTSESIREQSRTEGIDEADRLAEFEQLVPEADRNHCHNMRGECIDAHTAPLHRLFELTANRADIRTIGIGDGGNEIGMGSLPWHELHRRLSGPGAARVPCRIATDWTIVAGVSNWGGQALAAATLLLVNKVDAARDWTTHQQHRALERLVAEGPAVDGITRLREPTVDGLPFLTYIQPWEGLRRLMGL 344
BLAST of mRNA_M-pyrifera_M_contig85690.19979.1 vs. uniprot
Match: A0A7C2JYK9_9PLAN (DUF4392 domain-containing protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2JYK9_9PLAN) HSP 1 Score: 206 bits (525), Expect = 7.040e-62 Identity = 122/279 (43.73%), Postives = 156/279 (55.91%), Query Frame = 1 Query: 1 VPDAPMPAAETDGPLGATLLADVLSQNGIESRIITDESCASAIRTAMTACGVDLELFACPIGPILSRGWREDLWRSDFGRSITHLISVERVGPC----------------------LHESPSDARCRNMRGQPIDEWSADLYRLFE---ESPPHVRTIGIGDGGNEIGMGTF-WADITQNRQPPRHA---CRTRTDWTILAGVSDWGAMALATAVTLKRSDVSPLVSWTADRIQHALEQMVHRGPSIDGCTQLAEPTVDGLPFATYVQPWELIRRELGL 750 +P A PAAETDGP GA LLA LS+ G++ R++TD CA A+ +A G+ + G + + D R ++HLI+VERVGP P + RC NMRG+ ID +A L+R+FE + P VRTIGIGDGGNEIGMG+ W ++ Q P CR TDWTI+AGVS+WGA ALA AV R + L + +H MV GP++DG T+L EPTVDGLPF TY+QPWE +RR LGL Sbjct: 66 IPGAEPPAAETDGPPGAALLAIALSKCGMDVRLMTDVQCAPAVASAAREYGLPSDCVVSATGDETAVFFPPDAAR------LSHLIAVERVGPAHSLRSYAGRRPETDPDVQAFRRTMPFPHEDRCHNMRGEIIDAHTAPLHRVFETVSQLDPGVRTIGIGDGGNEIGMGSVPWDELRQRLNGPSAPLVPCRVPTDWTIVAGVSNWGAQALAVAVCHLRGETHHLAEFDLASEEHRWRAMVESGPAVDGVTRLREPTVDGLPFLTYIQPWEGMRRVLGL 338
BLAST of mRNA_M-pyrifera_M_contig85690.19979.1 vs. uniprot
Match: A0A7C4LKV7_9PLAN (DUF4392 domain-containing protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4LKV7_9PLAN) HSP 1 Score: 205 bits (522), Expect = 3.450e-61 Identity = 121/279 (43.37%), Postives = 151/279 (54.12%), Query Frame = 1 Query: 1 VPDAPMPAAETDGPLGATLLADVLSQNGIESRIITDESCASAIRTAMTACGVDLELFA-CPIGPILSRGWREDLWRSDFGRSITHLISVERVGPC-----------LHESPSDARCR-----------NMRGQPIDEWSADLYRLF---EESPPHVRTIGIGDGGNEIGMGTFWADITQNR----QPPRHACRTRTDWTILAGVSDWGAMALATAVTLKRSDVSPLVSWTADRIQHALEQMVHRGPSIDGCTQLAEPTVDGLPFATYVQPWELIRRELG 747 +P PAAETDGP GA LLA VLS G+ ++TD CASA+ A + + CP+ P + W + R +THLI+VERVGP LH+ A CR NMRG+ ID+ + L+ LF PHVRTIGIGDGGNEIGMG+ D ++R P CR DWTILAGVS+WGA ALA V R + D Q + +V RGP++DG T+L +PTVDGLPF TY+QPWE +RR L Sbjct: 75 IPAGQPPAAETDGPPGAALLAKVLSDCGLRVALLTDRPCASAVAVAAEQYALPRDCVGVCPLRPPDANEWLDRRVRMAAAEGLTHLIAVERVGPSHSLSTFAGSRSLHDPAVQAFCREVPAEHWDHCHNMRGEIIDDHTGPLHGLFLRIAAELPHVRTIGIGDGGNEIGMGSIPWDELRSRLAGPAAPLIPCRIPADWTILAGVSNWGAQALAAGVCRLRGTADCCTPYDTDAEQRRMLAVVQRGPAVDGVTRLQQPTVDGLPFLTYIQPWEAMRRWLA 353
BLAST of mRNA_M-pyrifera_M_contig85690.19979.1 vs. uniprot
Match: A0A5C9CBJ2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9CBJ2_9BACT) HSP 1 Score: 205 bits (521), Expect = 6.730e-61 Identity = 122/280 (43.57%), Postives = 154/280 (55.00%), Query Frame = 1 Query: 1 VPDAPMPAAETDGPLGATLLADVLSQNGIESRIITDESCASAIRTAMTACGVDLE-LFACPIGPILSRGWREDLWRSDFGRSITHLISVERVGPC------------------------LHESPSDAR--CRNMRGQPIDEWSADLYRLFEESP---PHVRTIGIGDGGNEIGMGTF-WADITQN---RQPPRHACRTRTDWTILAGVSDWGAMALATAVTLKRSDVSPLVSWTADRIQHALEQMVHRGPSIDGCTQLAEPTVDGLPFATYVQPWELIRR 738 +P A P AETDGP G+ LA L GI++ +ITDE CA A+R A G + LF + P+ + W +D +S+F R +THL+SVERVGP L E S+ C NMRG ID +A L+ LFE P P RTIG+GDGGNEIGMG W ++ + Q R CR D+ I+AG S+WGAMALA V L R + L WT +R + LE +V GP++DG T E TVDGLPF TY+QPWE I R Sbjct: 88 IPHAQPPCAETDGPPGSLFLAHCLRSLGIDAAVITDEPCAPAVRAAADGIGFPTDRLF---VAPLKAEMWCDDFLQSEFARGLTHLVSVERVGPSHTPESVGSGEWGVGSGADSPLSSFLAEVASEHHNHCHNMRGVCIDAHTAPLHLLFERLPQFHPTARTIGVGDGGNEIGMGAIPWFELRRRLSGEQAGRVPCRIACDFNIVAGTSNWGAMALAAGVCLLRDRLDVLQPWTQERHREWLEYLVANGPAVDGVTGRREATVDGLPFLTYIQPWEGILR 364
BLAST of mRNA_M-pyrifera_M_contig85690.19979.1 vs. uniprot
Match: A0A517ZMJ2_9PLAN (Uncharacterized protein n=3 Tax=Symmachiella dynata TaxID=2527995 RepID=A0A517ZMJ2_9PLAN) HSP 1 Score: 198 bits (504), Expect = 1.110e-58 Identity = 116/280 (41.43%), Postives = 154/280 (55.00%), Query Frame = 1 Query: 1 VPDAPMPAAETDGPLGATLLADVLSQNGIESRIITDESCASAIRTAMTACGVDLELFACPIGPILSRGWREDLWRSDFGRSITHLISVERVGPC-------------------LHE---SPSDARCRNMRGQPIDEWSADLYRLFE---ESPPHVRTIGIGDGGNEIGMGTFWADITQNRQPPRHA----CRTRTDWTILAGVSDWGAMALATAVTLKRSDVSPLVSWTADRIQHALEQMVHRGPSIDGCTQLAEPTVDGLPFATYVQPWELIRRELGLD 753 +P PAAETDGPLG LA VL + G+ES +ITD C A++ A A + + I G E ++S G+ +THLI++ERVGPC H+ + RC NMRG+ +D +S +L+RLFE +S P ++TIGIGDG NEIGMG+ + R HA CR TDWTI+ G S+WG ALA A+ + L + A + LE V GP++DG T+ EPTVDGLPF TY+QP E IR+ LG+D Sbjct: 65 IPGGQPPAAETDGPLGTLFLAAVLEKLGVESHVITDNHCHPALQAAAEAMEFPNDRVHQTVVNINETG--ETFFQSAPGKQLTHLIALERVGPCHTTTSLTGQRRSGTVPLEEFHQLVLPTAHDRCHNMRGEAMDAYSGNLHRLFEFATQSRPSIKTIGIGDGANEIGMGSIPWENLHRRLEGDHAGRVPCRIATDWTIVTGTSNWGGYALAAAIAHLKDAPQHLAPYDAAQQFGVLEHFVQHGPAVDGVTRRQEPTVDGLPFLTYIQPLEGIRQLLGID 342
BLAST of mRNA_M-pyrifera_M_contig85690.19979.1 vs. uniprot
Match: A0A518I7E9_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I7E9_9PLAN) HSP 1 Score: 197 bits (500), Expect = 3.650e-58 Identity = 119/280 (42.50%), Postives = 155/280 (55.36%), Query Frame = 1 Query: 1 VPDAPMPAAETDGPLGATLLADVLSQNGIESRIITDESCASAIRTAMTACGVDLELFACPIGPILSRGWREDLW-RSDFGR-SITHLISVERVGPC--------LHESPSDAR--------------CRNMRGQPIDEWSADLYRLFEESP---PHVRTIGIGDGGNEIGMGTFWADITQNRQPPRHA----CRTRTDWTILAGVSDWGAMALATAVTLKRSDVSPLVSWTADRIQHALEQMVHRGPSIDGCTQLAEPTVDGLPFATYVQPWELIRRELG 747 VP A +PAAETDGP GA LLA VL GI + ++TDE CA + A+ A ++ P + E+ W FGR +++HLISVERVGP ++P + C NMRG+ ID ++A L++LFE P P +TIG+GDGGNEIGMG + R H+ CR TDW I+AG S+WGA ALA AV L++ + L W D Q LE MV + ++DG T+ EPTVDGLPF TY+QPWE I + L Sbjct: 62 VPSADIPAAETDGPPGAVLLALVLEACGINTSVVTDELCAPVVSAAVDA-------YSYPKSQLNVLQTDEENWVELFFGRQNVSHLISVERVGPSHTPDTWAGQQKAPGTEQGDFHTKVPQDHFDCCHNMRGEIIDAFTAPLHQLFERLPDFFPEAQTIGVGDGGNEIGMGAISWEELDRRIASDHSGLIPCRIATDWNIVAGTSNWGASALAAAVALQKKETGILFEWQRDEQQTVLEAMVSQANAVDGVTKQREPTVDGLPFLTYMQPWEGILQILA 334 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85690.19979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85690.19979.1 >prot_M-pyrifera_M_contig85690.19979.1 ID=prot_M-pyrifera_M_contig85690.19979.1|Name=mRNA_M-pyrifera_M_contig85690.19979.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp MPAAETDGPLGATLLADVLSQNGIESRIITDESCASAIRTAMTACGVDLEback to top mRNA from alignment at M-pyrifera_M_contig85690:102..860- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85690.19979.1 ID=mRNA_M-pyrifera_M_contig85690.19979.1|Name=mRNA_M-pyrifera_M_contig85690.19979.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=759bp|location=Sequence derived from alignment at M-pyrifera_M_contig85690:102..860- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85690:102..860- >mRNA_M-pyrifera_M_contig85690.19979.1 ID=mRNA_M-pyrifera_M_contig85690.19979.1|Name=mRNA_M-pyrifera_M_contig85690.19979.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig85690:102..860- (Macrocystis pyrifera P11B4 male)back to top |