mRNA_M-pyrifera_M_contig85677.19974.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85677.19974.1 vs. uniprot
Match: R4Z229_9ACTN (Uncharacterized protein n=2 Tax=Candidatus Microthrix parvicella TaxID=41950 RepID=R4Z229_9ACTN) HSP 1 Score: 206 bits (524), Expect = 7.670e-60 Identity = 95/139 (68.35%), Postives = 110/139 (79.14%), Query Frame = 1 Query: 1 AMRDTDDAQVREGSNVFNSVGCQSCHVREIQTGPAAVDTLADQTIQPFTDLLLHDMGDGLADGRPDFEASGSEWRTPPLWGLGLIEEVNGERFLLHDGRARTLEEAILWHGGEAQTSTDRFVALEADKRAALLAFLEAL 417 AMRD + VR G+ F +VGC CH TGPA V L++QTI PFTDLLLHDMG GLADGRPDF ASG+EWRTPPLWGLGL+ VNGERF++HDGRART EEAI+WHGGEAQ + D F AL+AD+RA L+A+LEAL Sbjct: 327 AMRDFESPHVRSGAEQFGTVGCAGCHTTSQTTGPADVPMLSEQTISPFTDLLLHDMGPGLADGRPDFAASGTEWRTPPLWGLGLVPVVNGERFMMHDGRARTFEEAIMWHGGEAQAAADAFAALDADERADLIAYLEAL 465
BLAST of mRNA_M-pyrifera_M_contig85677.19974.1 vs. uniprot
Match: UPI00058DCC70 (thiol oxidoreductase n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00058DCC70) HSP 1 Score: 203 bits (517), Expect = 7.440e-59 Identity = 95/142 (66.90%), Postives = 114/142 (80.28%), Query Frame = 1 Query: 1 AMRDTDDAQVREGSNVFNSVGCQSCHVREIQTGPAA---VDTLADQTIQPFTDLLLHDMGDGLADGRPDFEASGSEWRTPPLWGLGLIEEVNGERFLLHDGRARTLEEAILWHGGEAQTSTDRFVALEADKRAALLAFLEAL 417 AMRD D +VR+G +F+ GC +CH +TGP A V+ L+DQT P+TDLLLHDMG+GLADGRPDF+ASGSEWRTPPLWG+GLI +VNGERFLLHDGRART+EEAILWHGGEA+ + +RF + D R AL+AFLEAL Sbjct: 319 AMRDADTDEVRDGVALFDDFGCATCHTPTQETGPIADVGVEALSDQTFSPYTDLLLHDMGEGLADGRPDFDASGSEWRTPPLWGIGLILDVNGERFLLHDGRARTIEEAILWHGGEAEDAAERFRTADLDDRTALIAFLEAL 460
BLAST of mRNA_M-pyrifera_M_contig85677.19974.1 vs. uniprot
Match: A0A1H4KNM1_9FLAO (CxxC motif-containing protein, DUF1111 family n=8 Tax=Maribacter TaxID=252356 RepID=A0A1H4KNM1_9FLAO) HSP 1 Score: 187 bits (476), Expect = 9.220e-53 Identity = 84/137 (61.31%), Postives = 105/137 (76.64%), Query Frame = 1 Query: 7 RDTDDAQVREGSNVFNSVGCQSCHVREIQTGPAAVDTLADQTIQPFTDLLLHDMGDGLADGRPDFEASGSEWRTPPLWGLGLIEEVNGERFLLHDGRARTLEEAILWHGGEAQTSTDRFVALEADKRAALLAFLEAL 417 RD DD V EG +F S+ C CH+ +++TG +D LA+QTI+P+TD+LLHDMGDGLADG PDFEA+G+EWRTPPLWG+GLIE VNG LLHDGRAR +EEAILWHGGEA S ++F L A++R ++ FL L Sbjct: 328 RDVDDQNVLEGKELFVSIDCAKCHIPKLETGAYEIDALANQTIRPYTDMLLHDMGDGLADGLPDFEANGNEWRTPPLWGIGLIETVNGHTNLLHDGRARNIEEAILWHGGEALASKEKFKELSAEERDKIIQFLNTL 464
BLAST of mRNA_M-pyrifera_M_contig85677.19974.1 vs. uniprot
Match: A0A5R9ATV0_9FLAO (C-type cytochrome n=2 Tax=Maribacter TaxID=252356 RepID=A0A5R9ATV0_9FLAO) HSP 1 Score: 186 bits (471), Expect = 5.240e-52 Identity = 84/139 (60.43%), Postives = 106/139 (76.26%), Query Frame = 1 Query: 1 AMRDTDDAQVREGSNVFNSVGCQSCHVREIQTGPAAVDTLADQTIQPFTDLLLHDMGDGLADGRPDFEASGSEWRTPPLWGLGLIEEVNGERFLLHDGRARTLEEAILWHGGEAQTSTDRFVALEADKRAALLAFLEAL 417 A RD DD V EG +FNS+ C +CH+ +I+TG + +LA+QTI+P+TDLLLHDMG+GLAD PDF+A+G+EWRTPPLWG+GLIE VN LLHDGRAR +EEAILWHGGEA + +F AL D+R+ L+ FL L Sbjct: 328 ARRDVDDENVLEGKEIFNSINCIACHIPKIETGSYDITSLANQTIRPYTDLLLHDMGEGLADNLPDFDAAGNEWRTPPLWGIGLIETVNSHTNLLHDGRARNIEEAILWHGGEALNAQTKFKALPQDERSKLIQFLNTL 466
BLAST of mRNA_M-pyrifera_M_contig85677.19974.1 vs. uniprot
Match: UPI001D05ACB9 (c-type cytochrome n=2 Tax=Zobellia nedashkovskayae TaxID=2779510 RepID=UPI001D05ACB9) HSP 1 Score: 185 bits (469), Expect = 1.270e-51 Identity = 81/139 (58.27%), Postives = 106/139 (76.26%), Query Frame = 1 Query: 1 AMRDTDDAQVREGSNVFNSVGCQSCHVREIQTGPAAVDTLADQTIQPFTDLLLHDMGDGLADGRPDFEASGSEWRTPPLWGLGLIEEVNGERFLLHDGRARTLEEAILWHGGEAQTSTDRFVALEADKRAALLAFLEAL 417 A RD D+ +V +G +FNS+ C CH+ +TG A+D LA+QTI+P+TDLLLHDMGD L+DG P+F A+G+EWRTPPLWG+GLIE VN LLHDGRAR +EEAILWHGGEA+ + F+AL ++R ++AF+E L Sbjct: 338 ARRDFDNEEVLQGKELFNSINCSGCHIATFETGAYAIDALANQTIRPYTDLLLHDMGDALSDGAPEFRATGNEWRTPPLWGVGLIETVNDHTNLLHDGRARNIEEAILWHGGEAEAIKNSFMALNKEERTKIIAFIETL 476
BLAST of mRNA_M-pyrifera_M_contig85677.19974.1 vs. uniprot
Match: UPI00188B9548 (c-type cytochrome n=1 Tax=Zobellia roscoffensis TaxID=2779508 RepID=UPI00188B9548) HSP 1 Score: 182 bits (462), Expect = 8.380e-51 Identity = 81/139 (58.27%), Postives = 105/139 (75.54%), Query Frame = 1 Query: 1 AMRDTDDAQVREGSNVFNSVGCQSCHVREIQTGPAAVDTLADQTIQPFTDLLLHDMGDGLADGRPDFEASGSEWRTPPLWGLGLIEEVNGERFLLHDGRARTLEEAILWHGGEAQTSTDRFVALEADKRAALLAFLEAL 417 A RD DD V +G +FN++ C CH+ +TG +D LA+QTI+P+TDLLLHDMG+GLAD P++ ASG EWRTPPLWG+GLIE VN LLHDGRART+EEAILWHGGEA+ +RF+AL+ ++R ++ F+E L Sbjct: 315 ARRDVDDEDVLKGKELFNTIHCSGCHIAVHETGAYEIDALANQTIRPYTDLLLHDMGEGLADNAPEYRASGVEWRTPPLWGVGLIETVNDHTNLLHDGRARTIEEAILWHGGEAEEIKNRFMALDKEERGQIIRFIETL 453
BLAST of mRNA_M-pyrifera_M_contig85677.19974.1 vs. uniprot
Match: A0A0F6W5J2_9DELT (Putative thiol oxidoreductase with 2 cytochrome c heme-binding site n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6W5J2_9DELT) HSP 1 Score: 182 bits (462), Expect = 9.120e-51 Identity = 83/139 (59.71%), Postives = 101/139 (72.66%), Query Frame = 1 Query: 1 AMRDTDDAQVREGSNVFNSVGCQSCHVREIQTGPAAVDTLADQTIQPFTDLLLHDMGDGLADGRPDFEASGSEWRTPPLWGLGLIEEVNGERFLLHDGRARTLEEAILWHGGEAQTSTDRFVALEADKRAALLAFLEAL 417 A RD DD V G +F GC SCHV ++TG + LADQ I P+TD+LLHD+G+GLAD RPDFEA G EWRTPPLWG+GL++ VN + L+HDGRAR L EAILWHGGEA+ S + F A+ D+R ALL FLE+L Sbjct: 319 ARRDADDPDVLHGKRLFRDAGCASCHVPRLETGEHEITALADQIIYPYTDMLLHDVGEGLADHRPDFEADGREWRTPPLWGIGLLQTVNRHQLLMHDGRARGLAEAILWHGGEAEASREAFRAMSRDEREALLRFLESL 457
BLAST of mRNA_M-pyrifera_M_contig85677.19974.1 vs. uniprot
Match: A0A5J4ITV1_9FLAO (Thiol oxidoreductase n=1 Tax=Patiriisocius marinus TaxID=1397112 RepID=A0A5J4ITV1_9FLAO) HSP 1 Score: 182 bits (462), Expect = 1.170e-50 Identity = 87/139 (62.59%), Postives = 106/139 (76.26%), Query Frame = 1 Query: 1 AMRDTDDAQVREGSNVFNSVGCQSCHVREIQTGPAAVDTLADQTIQPFTDLLLHDMGDGLADGRPDFEASGSEWRTPPLWGLGLIEEVNGERFLLHDGRARTLEEAILWHGGEAQTSTDRFVALEADKRAALLAFLEAL 417 A R+ +D V EG +FN++ C SCH +I TG A+ LA+QTI+P+TDLLLHDMG GLAD DF+A+G+EWRTPPLWG+GLIE VNG LLHDGRART+EEAILWHGGEA+TS F AL +RA +L FLE+L Sbjct: 331 ARRNVNDQDVLEGKTLFNNMQCISCHKPKIVTGSHAISALANQTIRPYTDLLLHDMGQGLADNVTDFKATGTEWRTPPLWGIGLIETVNGHSNLLHDGRARTIEEAILWHGGEAETSKQEFTALTNVERAQVLKFLESL 469
BLAST of mRNA_M-pyrifera_M_contig85677.19974.1 vs. uniprot
Match: A0A6I6LMZ6_PSEST (C-type cytochrome n=1 Tax=Pseudomonas stutzeri TaxID=316 RepID=A0A6I6LMZ6_PSEST) HSP 1 Score: 182 bits (462), Expect = 1.220e-50 Identity = 86/139 (61.87%), Postives = 103/139 (74.10%), Query Frame = 1 Query: 1 AMRDTDDAQVREGSNVFNSVGCQSCHVREIQTGPAAVDTLADQTIQPFTDLLLHDMGDGLADGRPDFEASGSEWRTPPLWGLGLIEEVNGERFLLHDGRARTLEEAILWHGGEAQTSTDRFVALEADKRAALLAFLEAL 417 A R DD QV G +F+ GCQ+CHV TG AA LA+Q I P+TDLLLHDMGDGLAD RP+FEASGSEWRTPPLWG+GL E V+G LHDGRAR L EAILWHGGEA+ + + ++D+R+ALLAFL++L Sbjct: 333 ARRKVDDPQVLAGKTLFHRAGCQNCHVPTFTTGDAAEPELANQVIHPYTDLLLHDMGDGLADHRPEFEASGSEWRTPPLWGIGLTETVSGHTQFLHDGRARNLLEAILWHGGEAERAKQAVLGFDSDERSALLAFLDSL 471
BLAST of mRNA_M-pyrifera_M_contig85677.19974.1 vs. uniprot
Match: A0A424I7M7_9BACT (Thiol oxidoreductase n=2 Tax=Verrucomicrobia TaxID=74201 RepID=A0A424I7M7_9BACT) HSP 1 Score: 181 bits (460), Expect = 1.870e-50 Identity = 87/140 (62.14%), Postives = 106/140 (75.71%), Query Frame = 1 Query: 1 AMRDTDDAQVREGSNVFNSVGCQSCHVREIQTG-PAAVDTLADQTIQPFTDLLLHDMGDGLADGRPDFEASGSEWRTPPLWGLGLIEEVNGERFLLHDGRARTLEEAILWHGGEAQTSTDRFVALEADKRAALLAFLEAL 417 A RD DD VR+G +F + C SCH E++TG + L +QTI+P+TDLLLHDMG GLADGR DFEASG EWRTPPLWG+GL E VNG LLHDGRAR L EAILWHGGEA++S +RF+ ++R+ALL+FLE+L Sbjct: 320 ARRDVDDPVVRQGQQIFAKMNCASCHTPELRTGNDYPLVELRNQTIRPYTDLLLHDMGKGLADGREDFEASGQEWRTPPLWGIGLQERVNGHTTLLHDGRARNLTEAILWHGGEAESSRERFLNSTREERSALLSFLESL 459 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85677.19974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85677.19974.1 >prot_M-pyrifera_M_contig85677.19974.1 ID=prot_M-pyrifera_M_contig85677.19974.1|Name=mRNA_M-pyrifera_M_contig85677.19974.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp MRSTTPRRFVRVVLAGSLALAACGSDTPDRGDVLLDLADASIIPAYDTLDback to top mRNA from alignment at M-pyrifera_M_contig85677:3..859+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85677.19974.1 ID=mRNA_M-pyrifera_M_contig85677.19974.1|Name=mRNA_M-pyrifera_M_contig85677.19974.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=857bp|location=Sequence derived from alignment at M-pyrifera_M_contig85677:3..859+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85677:3..859+ >mRNA_M-pyrifera_M_contig85677.19974.1 ID=mRNA_M-pyrifera_M_contig85677.19974.1|Name=mRNA_M-pyrifera_M_contig85677.19974.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig85677:3..859+ (Macrocystis pyrifera P11B4 male)back to top |