mRNA_M-pyrifera_M_contig85494.19929.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85494.19929.1
Unique NamemRNA_M-pyrifera_M_contig85494.19929.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A6I6ABK6_9PLAN (AI-2E family transporter n=6 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ABK6_9PLAN)

HSP 1 Score: 433 bits (1114), Expect = 2.200e-149
Identity = 272/287 (94.77%), Postives = 277/287 (96.52%), Query Frame = 1
Query:    1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861
            LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVL+WKMPHIVAISATLLLVLSVGFLLI+VLIYSTQQVIAKAETQYSEKLGIFI STFDTAKELGEPKPEE++ESSED+AAEAEPAVA XXXXXXXXXXXXXXXXXX      APVEAQKPPAGWFE MGVDLNKLQKMTTDYM QFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL
Sbjct:    6 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLKWKMPHIVAISATLLLVLSVGFLLIMVLIYSTQQVIAKAETQYSEKLGIFIGSTFDTAKELGEPKPEESKESSEDTAAEAEPAVAXXXXXXXXXXXXXXXXXXXGSAVREAPVEAQKPPAGWFEKMGVDLNKLQKMTTDYMKQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 292          
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A518AFU6_9PLAN (AI-2 transport protein TqsA n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AFU6_9PLAN)

HSP 1 Score: 344 bits (883), Expect = 1.100e-114
Identity = 213/287 (74.22%), Postives = 239/287 (83.28%), Query Frame = 1
Query:    1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861
            LQPSDEQAKVITG LMLL++IALAFVFYITKAVLIPFVIAIFIVTIVTP+VDLLVL+WKMPHIVAISATLLLVLS+G LL ++LIYSTQQVIAKAET+YSEKLGIFINSTF T +E+ EPK +E  ES                         XXXXXXXXX     PVEAQKPP GWF+ +GVDLN+++++TT YM   LK +AFSTMQTAL+FTTTSFFVAIFVIFLLAGR+PQAVVKN +YFEIE+KIRSYI+TKLIISL+TG+LVGVTLSLFGLELALVF IL
Sbjct:    5 LQPSDEQAKVITGSLMLLAIIALAFVFYITKAVLIPFVIAIFIVTIVTPLVDLLVLKWKMPHIVAISATLLLVLSIGLLLCLILIYSTQQVIAKAETEYSEKLGIFINSTFSTVQEVTEPKQKEQAESKS-----------------------XXXXXXXXXETPQTPVEAQKPPVGWFQKIGVDLNEMKQLTTRYMKDALKSIAFSTMQTALNFTTTSFFVAIFVIFLLAGRNPQAVVKNVIYFEIEKKIRSYISTKLIISLITGVLVGVTLSLFGLELALVFGIL 268          
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A518IL04_9PLAN (AI-2 transport protein TqsA n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IL04_9PLAN)

HSP 1 Score: 328 bits (840), Expect = 4.340e-108
Identity = 196/287 (68.29%), Postives = 224/287 (78.05%), Query Frame = 1
Query:    1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861
            LQPSDEQAKVITGCLMLLS+IALAFVFYITKAVLIPF+IAIFIVTI TP+VDLLVL+WK+PHI+AISATLLLVLS+GFL+ + LIYSTQQVIAKAETQYSEKLGIFI S F+T KE+  P+ +   E+ E +A E      +                         PVEAQKP  GWF  MG++LN LQ   TDYM   L+ +A  TMQTAL+FTTTSFFVAIFVIFLLAGR+P+AVV+N +Y EIEQKIRSYI+TKLIISL+T +LVGVTLSLFGLELALVFAIL
Sbjct:    5 LQPSDEQAKVITGCLMLLSIIALAFVFYITKAVLIPFIIAIFIVTIFTPLVDLLVLKWKLPHIIAISATLLLVLSIGFLICLTLIYSTQQVIAKAETQYSEKLGIFIQSMFETVKEVESPQQKTDTEAIESAAPEISTPQTQTAPAP-----------------DTQPVEAQKPETGWFGKMGINLNVLQDQITDYMKNALRIIAIGTMQTALNFTTTSFFVAIFVIFLLAGRNPEAVVQNVIYREIEQKIRSYISTKLIISLITSVLVGVTLSLFGLELALVFAIL 274          
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A517VPI8_9PLAN (AI-2 transport protein TqsA n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VPI8_9PLAN)

HSP 1 Score: 322 bits (824), Expect = 1.070e-105
Identity = 194/290 (66.90%), Postives = 224/290 (77.24%), Query Frame = 1
Query:    1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELG---EPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861
            L+PSDEQ  VITGCLMLL++ A+AFVFYITKAVLIPFVIAIFI TIVTP+VDLLVL+WK+PHIVAISATLLLVLS GFLL + LIYSTQQVI KAE+QYS+ LGIFI+S F+TAKE+    EP    +++S E+ ++EA P+  E                      +  P  A+KP   WF+ MG+DLNKLQ  TT YM   LK +AFSTMQTALSFTTTSFFVAIFVIFLLAGR+P AV+KN LY EIEQKIRSYI+TKLIISL+TG LVG+TLSLFGLELA VF IL
Sbjct:    5 LKPSDEQTSVITGCLMLLTIFAIAFVFYITKAVLIPFVIAIFIATIVTPLVDLLVLKWKLPHIVAISATLLLVLSSGFLLCLALIYSTQQVIQKAESQYSKNLGIFISSAFNTAKEVSDSDEPSKINSQDSREEESSEAAPSSIE----------------------NPPPTVAEKPETSWFDKMGIDLNKLQMETTAYMKDALKSIAFSTMQTALSFTTTSFFVAIFVIFLLAGRNPHAVIKNVLYREIEQKIRSYISTKLIISLITGTLVGITLSLFGLELAFVFGIL 272          
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A517XK18_9PLAN (AI-2 transport protein TqsA n=7 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XK18_9PLAN)

HSP 1 Score: 312 bits (799), Expect = 8.330e-102
Identity = 190/299 (63.55%), Postives = 222/299 (74.25%), Query Frame = 1
Query:    1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELG------------EPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861
            LQPSDEQAKVITGCL+LLS+IALA VFY+T+AVL+PFVIAIFI TIVTP+VDLLVL+WKMP I+AIS TLLLVL+ GFL+ + LIYSTQQVI KAE QYSEK GIFINS F+ AKE              EP+PE  ++  +++  EA P V                            V A+KP  GWF+ MG+DL+ L+K T DYM   LK +A STMQ+AL+FTTTSFFVAIFVIFLLAGRDP AVVKN++YFEIEQKIRSYI+TKL++SL+TG LVGVTL LFGLELALVFAIL
Sbjct:    5 LQPSDEQAKVITGCLLLLSIIALAGVFYVTQAVLVPFVIAIFIATIVTPLVDLLVLKWKMPQIIAISLTLLLVLTFGFLICMTLIYSTQQVIYKAENQYSEKFGIFINSVFEAAKEADDLPVRKLEEDTKEPQPETPDQ--KEATPEAPPTVT---------------------VDDGEAVAAEKPEIGWFQKMGIDLDTLKKATMDYMRNSLKSIAVSTMQSALNFTTTSFFVAIFVIFLLAGRDPNAVVKNEIYFEIEQKIRSYISTKLVLSLITGTLVGVTLKLFGLELALVFAIL 280          
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A517VMJ8_9PLAN (AI-2 transport protein TqsA n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VMJ8_9PLAN)

HSP 1 Score: 309 bits (791), Expect = 1.350e-100
Identity = 188/288 (65.28%), Postives = 221/288 (76.74%), Query Frame = 1
Query:    1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGE-PKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861
            LQPSDEQAKVITGCL+LLS+IALA VFYIT+AVLIPFVIAIFI TIVTP+VDLLVL+WK+P I+AIS TLLLVLS GFL+ + LIYSTQQVI KAETQYSEK GIFINS F+ AKE  + P+ +  EE       +AEP   +                      ++ P+ A+KP  GWF+ MG+DL+ L+K T DYM   LK +A STMQ+AL+FTTTSFFVAIFVIFLLAGR+P AVVKN +YFEIEQKIRSYI+TKL++S++T ILVG TL LFGLELALVFAIL
Sbjct:    5 LQPSDEQAKVITGCLLLLSIIALAGVFYITQAVLIPFVIAIFIATIVTPMVDLLVLKWKLPQIIAISLTLLLVLSFGFLICMTLIYSTQQVIYKAETQYSEKFGIFINSAFEAAKEADDLPETQPVEE-------KAEPQFQDIDQKEPSPEVPPVIKAD-----ASEPLVAEKPETGWFQKMGIDLDTLKKATIDYMRDSLKSIAVSTMQSALNFTTTSFFVAIFVIFLLAGRNPNAVVKNVIYFEIEQKIRSYISTKLVLSMITAILVGFTLKLFGLELALVFAIL 280          
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A517ZW43_9PLAN (AI-2 transport protein TqsA n=2 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZW43_9PLAN)

HSP 1 Score: 94.0 bits (232), Expect = 2.170e-18
Identity = 93/288 (32.29%), Postives = 144/288 (50.00%), Query Frame = 1
Query:   10 SDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVL-IYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEV---AFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861
            +DEQ +++T CLM+L+ +A+A V   T++V++PFVIAIFIV+IV+PIVD  V+R K P  +A++  LLLVL+  F+ I  L ++   Q +  A + YS            T + LG+               E    +AE                                        G++  ++ ++         K +   A  T  TA+   ++ FFV IFVIFLLAGR+P  V++  +Y EI+QKIR+YI+TK+ +S  TGI+V   L  + L+ A +F +L
Sbjct:    8 TDEQKRIVTSCLMVLAAVAIAGVLIFTRSVMVPFVIAIFIVSIVSPIVDYQVIRLKFPRSIAVTVALLLVLA--FVSIFSLFVFGAVQRVGTAASNYSS-----------TVEGLGQ---------------EFGNNIAEM--------------------------------------FGIEERRVTQIINGLAADVAKSIPNMAQRTAGTAVDVLSSGFFVLIFVIFLLAGRNPH-VIRKGIYAEIDQKIRAYISTKVALSAFTGIVVWGILEYYELKFAGIFGLL 228          
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A7X7YYF8_9BACT (AI-2E family transporter n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X7YYF8_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 4.930e-17
Identity = 90/298 (30.20%), Postives = 144/298 (48.32%), Query Frame = 1
Query:   16 EQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKP----PAGWFENMGVDLNKLQ--------KMTTDYMTQFLKEVAFSTMQTA----LSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861
            EQ  + T  L +++ +ALA     T+ V++PFV+A+FIV +V+P+ D  V R ++P  +AI  TLL+V++V   L+  LI      I     +YS       N   +T + +  PK E    ++ +      PA  +                       AA ++ + P    P    E  G+    +Q        ++ T  + + LK   F+ +  A    L   ++  FV IFV+FLL GR+P     +++Y ++  KIR Y+  K+++S  TGILV VTL+L GL+LA VF IL
Sbjct:    7 EQNWLTTASLGIIAAVALAMALGYTRPVMVPFVVALFIVALVSPVEDFQVKRLRLPRFIAIPVTLLVVMAV-IALVFFLIAQAITTIVSTAGEYSNSFEYMANKLIETVEYIY-PKAEPEPAAAPNDTGPLPPATPKDVRKAPPKPGPLVLYPMLDEAERAAVLDVKPPSTAPPGEVHEPNGISAEVIQEGLPKKTPRIDTQQIVKDLKNYVFNIVTNAFGTILGLISSMLFVVIFVLFLLLGRNPYTT-HSQVYSDVVGKIRKYVGIKIVVSASTGILVWVTLTLIGLKLAAVFGIL 301          
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A1G2Z9M7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium RBG_13_60_9 TaxID=1801963 RepID=A0A1G2Z9M7_9BACT)

HSP 1 Score: 84.7 bits (208), Expect = 6.650e-15
Identity = 92/304 (30.26%), Postives = 146/304 (48.03%), Query Frame = 1
Query:   16 EQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKE-------LGEPKPEEAEESSEDSA-----AEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTT---DYMTQFLKE-------VAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861
            EQ  +IT  L +L+V+ALA V   T+AV++PFV+A+FIV +V PI D  V R ++P I+A+  TLL       L+ +++  +T  +++ A   YS   G          +E       L +P P   E  S+  A      ++EP + E                             +   +      G++ N L K      D + Q +K+       +  +   T     ++ F V IFVIFLLAGR+P     +++Y ++ QKIR Y+ TK++IS  TG+LV  +L++ GL+LA VF +L
Sbjct:    7 EQTWLITVSLAILAVVALAVVLIYTRAVMMPFVVALFIVGLVAPIEDFQVKRLRLPRIIAVIVTLLXXXXXXXLVSMLIAQATTTIVSTAG-DYSRSFGDMAKKILQPIEEYFYKEDLLPKPLPAPNEPGSQAPAKVVGPVQSEPVLLELFSRVDDSNKPAVMDVKPQLDRPGVEDSNKVRDSNEAAVPGLEPNALAKKERPIGDIIGQIIKDLRNYIFNIVTNAFGTIFGLISSVFLVCIFVIFLLAGRNPYTE-HSQVYKDVMQKIRRYVGTKVVISAATGVLVWASLTIIGLKLAGVFGVL 308          
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A1U9NQT4_9BACT (Transport of quorum-sensing signal protein n=1 Tax=Anaerohalosphaera lusitana TaxID=1936003 RepID=A0A1U9NQT4_9BACT)

HSP 1 Score: 83.2 bits (204), Expect = 1.530e-14
Identity = 80/282 (28.37%), Postives = 139/282 (49.29%), Query Frame = 1
Query:   16 EQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861
            E   ++T CL++L+++A+A V + T+ ++IPFV++IFIV++V+P++D  V++ K    +A+  TLL+VL+V     + +  + Q V++  +  Y + +  F +  F                                                         V+        FE  G+DL+  Q    + + + +  +   T  T + F ++   V+IFVIFLL+GR+P  V++  +Y +I+  IR YI TK+IIS +TG+LV + L + GLELA VF +L
Sbjct:   19 EHFWLMTICLLILAMVAIAMVLHYTQTIMIPFVLSIFIVSLVSPLLDYQVIKLKFNRTMAVCITLLVVLTVIVATCLAVSEAVQTVVSTVKP-YMDSVETFTDKVF---------------------------------------------------------VQ--------FEEWGLDLS--QDSVMEELRKKIPNLVTDTFDTVMGFVSSFVLVSIFVIFLLSGRNPH-VIRKGVYADIDNGIRRYIGTKVIISSITGVLVYIILRVLGLELAAVFGML 231          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6ABK6_9PLAN2.200e-14994.77AI-2E family transporter n=6 Tax=Gimesia TaxID=164... [more]
A0A518AFU6_9PLAN1.100e-11474.22AI-2 transport protein TqsA n=3 Tax=Gimesia panare... [more]
A0A518IL04_9PLAN4.340e-10868.29AI-2 transport protein TqsA n=2 Tax=Gimesia TaxID=... [more]
A0A517VPI8_9PLAN1.070e-10566.90AI-2 transport protein TqsA n=2 Tax=Gimesia aquari... [more]
A0A517XK18_9PLAN8.330e-10263.55AI-2 transport protein TqsA n=7 Tax=Planctomycetac... [more]
A0A517VMJ8_9PLAN1.350e-10065.28AI-2 transport protein TqsA n=1 Tax=Gimesia algae ... [more]
A0A517ZW43_9PLAN2.170e-1832.29AI-2 transport protein TqsA n=2 Tax=Symmachiella T... [more]
A0A7X7YYF8_9BACT4.930e-1730.20AI-2E family transporter n=1 Tax=Planctomycetes ba... [more]
A0A1G2Z9M7_9BACT6.650e-1530.26Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A1U9NQT4_9BACT1.530e-1428.37Transport of quorum-sensing signal protein n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85494contigM-pyrifera_M_contig85494:1..861 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score310.5
Seed ortholog evalue8.4e-82
Seed eggNOG ortholog344747.PM8797T_11199
KEGG koko:K11744
Hectar predicted targeting categoryother localisation
EggNOG free text desc.membrane protein-putative a permease
EggNOG OGs2J103@203682,COG0628@1,COG0628@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size861
Cds size861
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816764.1553848-CDS-M-pyrifera_M_contig85494:0..8611622816764.1553848-CDS-M-pyrifera_M_contig85494:0..861Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85494 1..861 -
1692278164.4734635-CDS-M-pyrifera_M_contig85494:0..8611692278164.4734635-CDS-M-pyrifera_M_contig85494:0..861Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85494 1..861 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85494.19929.1prot_M-pyrifera_M_contig85494.19929.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85494 1..861 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85494.19929.1

>prot_M-pyrifera_M_contig85494.19929.1 ID=prot_M-pyrifera_M_contig85494.19929.1|Name=mRNA_M-pyrifera_M_contig85494.19929.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=287bp
LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPI
VDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYS
EKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAERPTTAEAP
TAPVTPTVPDGPEISAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQF
LKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQK
IRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL
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mRNA from alignment at M-pyrifera_M_contig85494:1..861-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85494.19929.1 ID=mRNA_M-pyrifera_M_contig85494.19929.1|Name=mRNA_M-pyrifera_M_contig85494.19929.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=861bp|location=Sequence derived from alignment at M-pyrifera_M_contig85494:1..861- (Macrocystis pyrifera P11B4 male)
CTGCAACCTTCGGATGAGCAGGCCAAAGTGATCACGGGCTGTCTGATGTT GCTGTCAGTCATTGCCCTGGCTTTTGTGTTTTATATTACCAAGGCCGTGT TGATCCCGTTTGTGATTGCCATTTTCATCGTGACGATTGTGACGCCGATC GTCGACCTGCTGGTTCTGAGATGGAAAATGCCACATATTGTCGCGATCTC CGCCACGCTGTTGCTGGTACTGTCGGTTGGTTTTCTGCTGATTATAGTAC TGATCTACTCGACGCAGCAGGTGATTGCGAAAGCGGAGACGCAGTACAGC GAGAAGCTGGGGATCTTTATCAATTCCACATTCGATACGGCGAAGGAACT CGGTGAGCCCAAGCCGGAAGAGGCTGAGGAGTCCAGCGAGGATTCGGCAG CTGAAGCGGAACCGGCTGTTGCAGAACGTCCGACTACTGCCGAAGCGCCG ACAGCTCCTGTGACACCCACGGTTCCTGACGGACCTGAGATCAGCGCAGC ACCGGTCGAAGCTCAGAAGCCTCCTGCCGGCTGGTTTGAGAATATGGGAG TGGACCTGAATAAGTTACAGAAAATGACCACTGACTACATGACACAGTTC CTGAAGGAGGTTGCCTTCAGTACAATGCAGACTGCGCTCAGTTTTACGAC GACCTCTTTCTTTGTGGCGATCTTTGTGATCTTCCTGCTGGCGGGTCGTG ATCCACAGGCTGTCGTCAAGAATAAGCTCTATTTCGAGATCGAACAGAAA ATCCGCAGCTATATTACAACCAAGCTGATCATCTCGCTGGTGACGGGGAT CCTGGTGGGAGTGACGCTCTCGCTGTTCGGACTGGAACTGGCGCTGGTGT TCGCGATTCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85494:1..861-

>mRNA_M-pyrifera_M_contig85494.19929.1 ID=mRNA_M-pyrifera_M_contig85494.19929.1|Name=mRNA_M-pyrifera_M_contig85494.19929.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1722bp|location=Sequence derived from alignment at M-pyrifera_M_contig85494:1..861- (Macrocystis pyrifera P11B4 male)
CTGCAACCTTCGGATGAGCAGGCCAAAGTGATCACGGGCTGTCTGATGTT
GCTGTCAGTCATTGCCCTGGCTTTTGTGTTTTATATTACCAAGGCCGTGT
TGATCCCGTTTGTGATTGCCATTTTCATCGTGACGATTGTGACGCCGATC
GTCGACCTGCTGGTTCTGAGATGGAAAATGCCACATATTGTCGCGATCTC
CGCCACGCTGTTGCTGGTACTGTCGGTTGGTTTTCTGCTGATTATAGTAC
TGATCTACTCGACGCAGCAGGTGATTGCGAAAGCGGAGACGCAGTACAGC
GAGAAGCTGGGGATCTTTATCAATTCCACATTCGATACGGCGAAGGAACT
CGGTGAGCCCAAGCCGGAAGAGGCTGAGGAGTCCAGCGAGGATTCGGCAG
CTGAAGCGGAACCGGCTGTTGCAGAACGTCCGACTACTGCCGAAGCGCCG
ACAGCTCCTGTGACACCCACGGTTCCTGACGGACCTGAGATCAGCGCAGC
ACCGGTCGAAGCTCAGAAGCCTCCTGCCGGCTGGTTTGAGAATATGGGAG
TGGACCTGAATAAGTTACAGAAAATGACCACTGACTACATGACACAGTTC
CTGAAGGAGGTTGCCTTCAGTACAATGCAGACTGCGCTCAGTTTTACGAC
GACCTCTTTCTTTGTGGCGATCTTTGTGATCTTCCTGCTGGCGGGTCGTG
ATCCACAGGCTGTCGTCAAGAATAAGCTCTATTTCGAGATCGAACAGAAA
ATCCGCAGCTATATTACAACCAAGCTGATCATCTCGCTGGTGACGGGGAT
CCTGGTGGGAGTGACGCTCTCGCTGTTCGGACTGGAACTGGCGCTGGTGT
TCGCGATTCTGCTGCAACCTTCGGATGAGCAGGCCAAAGTGATCACGGGC
TGTCTGATGTTGCTGTCAGTCATTGCCCTGGCTTTTGTGTTTTATATTAC
CAAGGCCGTGTTGATCCCGTTTGTGATTGCCATTTTCATCGTGACGATTG
TGACGCCGATCGTCGACCTGCTGGTTCTGAGATGGAAAATGCCACATATT
GTCGCGATCTCCGCCACGCTGTTGCTGGTACTGTCGGTTGGTTTTCTGCT
GATTATAGTACTGATCTACTCGACGCAGCAGGTGATTGCGAAAGCGGAGA
CGCAGTACAGCGAGAAGCTGGGGATCTTTATCAATTCCACATTCGATACG
GCGAAGGAACTCGGTGAGCCCAAGCCGGAAGAGGCTGAGGAGTCCAGCGA
GGATTCGGCAGCTGAAGCGGAACCGGCTGTTGCAGAACGTCCGACTACTG
CCGAAGCGCCGACAGCTCCTGTGACACCCACGGTTCCTGACGGACCTGAG
ATCAGCGCAGCACCGGTCGAAGCTCAGAAGCCTCCTGCCGGCTGGTTTGA
GAATATGGGAGTGGACCTGAATAAGTTACAGAAAATGACCACTGACTACA
TGACACAGTTCCTGAAGGAGGTTGCCTTCAGTACAATGCAGACTGCGCTC
AGTTTTACGACGACCTCTTTCTTTGTGGCGATCTTTGTGATCTTCCTGCT
GGCGGGTCGTGATCCACAGGCTGTCGTCAAGAATAAGCTCTATTTCGAGA
TCGAACAGAAAATCCGCAGCTATATTACAACCAAGCTGATCATCTCGCTG
GTGACGGGGATCCTGGTGGGAGTGACGCTCTCGCTGTTCGGACTGGAACT
GGCGCTGGTGTTCGCGATTCTG
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