mRNA_M-pyrifera_M_contig85494.19929.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A6I6ABK6_9PLAN (AI-2E family transporter n=6 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ABK6_9PLAN) HSP 1 Score: 433 bits (1114), Expect = 2.200e-149 Identity = 272/287 (94.77%), Postives = 277/287 (96.52%), Query Frame = 1 Query: 1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVL+WKMPHIVAISATLLLVLSVGFLLI+VLIYSTQQVIAKAETQYSEKLGIFI STFDTAKELGEPKPEE++ESSED+AAEAEPAVA XXXXXXXXXXXXXXXXXX APVEAQKPPAGWFE MGVDLNKLQKMTTDYM QFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL Sbjct: 6 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLKWKMPHIVAISATLLLVLSVGFLLIMVLIYSTQQVIAKAETQYSEKLGIFIGSTFDTAKELGEPKPEESKESSEDTAAEAEPAVAXXXXXXXXXXXXXXXXXXXGSAVREAPVEAQKPPAGWFEKMGVDLNKLQKMTTDYMKQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 292
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A518AFU6_9PLAN (AI-2 transport protein TqsA n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AFU6_9PLAN) HSP 1 Score: 344 bits (883), Expect = 1.100e-114 Identity = 213/287 (74.22%), Postives = 239/287 (83.28%), Query Frame = 1 Query: 1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861 LQPSDEQAKVITG LMLL++IALAFVFYITKAVLIPFVIAIFIVTIVTP+VDLLVL+WKMPHIVAISATLLLVLS+G LL ++LIYSTQQVIAKAET+YSEKLGIFINSTF T +E+ EPK +E ES XXXXXXXXX PVEAQKPP GWF+ +GVDLN+++++TT YM LK +AFSTMQTAL+FTTTSFFVAIFVIFLLAGR+PQAVVKN +YFEIE+KIRSYI+TKLIISL+TG+LVGVTLSLFGLELALVF IL Sbjct: 5 LQPSDEQAKVITGSLMLLAIIALAFVFYITKAVLIPFVIAIFIVTIVTPLVDLLVLKWKMPHIVAISATLLLVLSIGLLLCLILIYSTQQVIAKAETEYSEKLGIFINSTFSTVQEVTEPKQKEQAESKS-----------------------XXXXXXXXXETPQTPVEAQKPPVGWFQKIGVDLNEMKQLTTRYMKDALKSIAFSTMQTALNFTTTSFFVAIFVIFLLAGRNPQAVVKNVIYFEIEKKIRSYISTKLIISLITGVLVGVTLSLFGLELALVFGIL 268
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A518IL04_9PLAN (AI-2 transport protein TqsA n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IL04_9PLAN) HSP 1 Score: 328 bits (840), Expect = 4.340e-108 Identity = 196/287 (68.29%), Postives = 224/287 (78.05%), Query Frame = 1 Query: 1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861 LQPSDEQAKVITGCLMLLS+IALAFVFYITKAVLIPF+IAIFIVTI TP+VDLLVL+WK+PHI+AISATLLLVLS+GFL+ + LIYSTQQVIAKAETQYSEKLGIFI S F+T KE+ P+ + E+ E +A E + PVEAQKP GWF MG++LN LQ TDYM L+ +A TMQTAL+FTTTSFFVAIFVIFLLAGR+P+AVV+N +Y EIEQKIRSYI+TKLIISL+T +LVGVTLSLFGLELALVFAIL Sbjct: 5 LQPSDEQAKVITGCLMLLSIIALAFVFYITKAVLIPFIIAIFIVTIFTPLVDLLVLKWKLPHIIAISATLLLVLSIGFLICLTLIYSTQQVIAKAETQYSEKLGIFIQSMFETVKEVESPQQKTDTEAIESAAPEISTPQTQTAPAP-----------------DTQPVEAQKPETGWFGKMGINLNVLQDQITDYMKNALRIIAIGTMQTALNFTTTSFFVAIFVIFLLAGRNPEAVVQNVIYREIEQKIRSYISTKLIISLITSVLVGVTLSLFGLELALVFAIL 274
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A517VPI8_9PLAN (AI-2 transport protein TqsA n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VPI8_9PLAN) HSP 1 Score: 322 bits (824), Expect = 1.070e-105 Identity = 194/290 (66.90%), Postives = 224/290 (77.24%), Query Frame = 1 Query: 1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELG---EPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861 L+PSDEQ VITGCLMLL++ A+AFVFYITKAVLIPFVIAIFI TIVTP+VDLLVL+WK+PHIVAISATLLLVLS GFLL + LIYSTQQVI KAE+QYS+ LGIFI+S F+TAKE+ EP +++S E+ ++EA P+ E + P A+KP WF+ MG+DLNKLQ TT YM LK +AFSTMQTALSFTTTSFFVAIFVIFLLAGR+P AV+KN LY EIEQKIRSYI+TKLIISL+TG LVG+TLSLFGLELA VF IL Sbjct: 5 LKPSDEQTSVITGCLMLLTIFAIAFVFYITKAVLIPFVIAIFIATIVTPLVDLLVLKWKLPHIVAISATLLLVLSSGFLLCLALIYSTQQVIQKAESQYSKNLGIFISSAFNTAKEVSDSDEPSKINSQDSREEESSEAAPSSIE----------------------NPPPTVAEKPETSWFDKMGIDLNKLQMETTAYMKDALKSIAFSTMQTALSFTTTSFFVAIFVIFLLAGRNPHAVIKNVLYREIEQKIRSYISTKLIISLITGTLVGITLSLFGLELAFVFGIL 272
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A517XK18_9PLAN (AI-2 transport protein TqsA n=7 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XK18_9PLAN) HSP 1 Score: 312 bits (799), Expect = 8.330e-102 Identity = 190/299 (63.55%), Postives = 222/299 (74.25%), Query Frame = 1 Query: 1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELG------------EPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861 LQPSDEQAKVITGCL+LLS+IALA VFY+T+AVL+PFVIAIFI TIVTP+VDLLVL+WKMP I+AIS TLLLVL+ GFL+ + LIYSTQQVI KAE QYSEK GIFINS F+ AKE EP+PE ++ +++ EA P V V A+KP GWF+ MG+DL+ L+K T DYM LK +A STMQ+AL+FTTTSFFVAIFVIFLLAGRDP AVVKN++YFEIEQKIRSYI+TKL++SL+TG LVGVTL LFGLELALVFAIL Sbjct: 5 LQPSDEQAKVITGCLLLLSIIALAGVFYVTQAVLVPFVIAIFIATIVTPLVDLLVLKWKMPQIIAISLTLLLVLTFGFLICMTLIYSTQQVIYKAENQYSEKFGIFINSVFEAAKEADDLPVRKLEEDTKEPQPETPDQ--KEATPEAPPTVT---------------------VDDGEAVAAEKPEIGWFQKMGIDLDTLKKATMDYMRNSLKSIAVSTMQSALNFTTTSFFVAIFVIFLLAGRDPNAVVKNEIYFEIEQKIRSYISTKLVLSLITGTLVGVTLKLFGLELALVFAIL 280
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A517VMJ8_9PLAN (AI-2 transport protein TqsA n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VMJ8_9PLAN) HSP 1 Score: 309 bits (791), Expect = 1.350e-100 Identity = 188/288 (65.28%), Postives = 221/288 (76.74%), Query Frame = 1 Query: 1 LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGE-PKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861 LQPSDEQAKVITGCL+LLS+IALA VFYIT+AVLIPFVIAIFI TIVTP+VDLLVL+WK+P I+AIS TLLLVLS GFL+ + LIYSTQQVI KAETQYSEK GIFINS F+ AKE + P+ + EE +AEP + ++ P+ A+KP GWF+ MG+DL+ L+K T DYM LK +A STMQ+AL+FTTTSFFVAIFVIFLLAGR+P AVVKN +YFEIEQKIRSYI+TKL++S++T ILVG TL LFGLELALVFAIL Sbjct: 5 LQPSDEQAKVITGCLLLLSIIALAGVFYITQAVLIPFVIAIFIATIVTPMVDLLVLKWKLPQIIAISLTLLLVLSFGFLICMTLIYSTQQVIYKAETQYSEKFGIFINSAFEAAKEADDLPETQPVEE-------KAEPQFQDIDQKEPSPEVPPVIKAD-----ASEPLVAEKPETGWFQKMGIDLDTLKKATIDYMRDSLKSIAVSTMQSALNFTTTSFFVAIFVIFLLAGRNPNAVVKNVIYFEIEQKIRSYISTKLVLSMITAILVGFTLKLFGLELALVFAIL 280
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A517ZW43_9PLAN (AI-2 transport protein TqsA n=2 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZW43_9PLAN) HSP 1 Score: 94.0 bits (232), Expect = 2.170e-18 Identity = 93/288 (32.29%), Postives = 144/288 (50.00%), Query Frame = 1 Query: 10 SDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVL-IYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEV---AFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861 +DEQ +++T CLM+L+ +A+A V T++V++PFVIAIFIV+IV+PIVD V+R K P +A++ LLLVL+ F+ I L ++ Q + A + YS T + LG+ E +AE G++ ++ ++ K + A T TA+ ++ FFV IFVIFLLAGR+P V++ +Y EI+QKIR+YI+TK+ +S TGI+V L + L+ A +F +L Sbjct: 8 TDEQKRIVTSCLMVLAAVAIAGVLIFTRSVMVPFVIAIFIVSIVSPIVDYQVIRLKFPRSIAVTVALLLVLA--FVSIFSLFVFGAVQRVGTAASNYSS-----------TVEGLGQ---------------EFGNNIAEM--------------------------------------FGIEERRVTQIINGLAADVAKSIPNMAQRTAGTAVDVLSSGFFVLIFVIFLLAGRNPH-VIRKGIYAEIDQKIRAYISTKVALSAFTGIVVWGILEYYELKFAGIFGLL 228
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A7X7YYF8_9BACT (AI-2E family transporter n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X7YYF8_9BACT) HSP 1 Score: 90.9 bits (224), Expect = 4.930e-17 Identity = 90/298 (30.20%), Postives = 144/298 (48.32%), Query Frame = 1 Query: 16 EQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKP----PAGWFENMGVDLNKLQ--------KMTTDYMTQFLKEVAFSTMQTA----LSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861 EQ + T L +++ +ALA T+ V++PFV+A+FIV +V+P+ D V R ++P +AI TLL+V++V L+ LI I +YS N +T + + PK E ++ + PA + AA ++ + P P E G+ +Q ++ T + + LK F+ + A L ++ FV IFV+FLL GR+P +++Y ++ KIR Y+ K+++S TGILV VTL+L GL+LA VF IL Sbjct: 7 EQNWLTTASLGIIAAVALAMALGYTRPVMVPFVVALFIVALVSPVEDFQVKRLRLPRFIAIPVTLLVVMAV-IALVFFLIAQAITTIVSTAGEYSNSFEYMANKLIETVEYIY-PKAEPEPAAAPNDTGPLPPATPKDVRKAPPKPGPLVLYPMLDEAERAAVLDVKPPSTAPPGEVHEPNGISAEVIQEGLPKKTPRIDTQQIVKDLKNYVFNIVTNAFGTILGLISSMLFVVIFVLFLLLGRNPYTT-HSQVYSDVVGKIRKYVGIKIVVSASTGILVWVTLTLIGLKLAAVFGIL 301
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A1G2Z9M7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium RBG_13_60_9 TaxID=1801963 RepID=A0A1G2Z9M7_9BACT) HSP 1 Score: 84.7 bits (208), Expect = 6.650e-15 Identity = 92/304 (30.26%), Postives = 146/304 (48.03%), Query Frame = 1 Query: 16 EQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKE-------LGEPKPEEAEESSEDSA-----AEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTT---DYMTQFLKE-------VAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861 EQ +IT L +L+V+ALA V T+AV++PFV+A+FIV +V PI D V R ++P I+A+ TLL L+ +++ +T +++ A YS G +E L +P P E S+ A ++EP + E + + G++ N L K D + Q +K+ + + T ++ F V IFVIFLLAGR+P +++Y ++ QKIR Y+ TK++IS TG+LV +L++ GL+LA VF +L Sbjct: 7 EQTWLITVSLAILAVVALAVVLIYTRAVMMPFVVALFIVGLVAPIEDFQVKRLRLPRIIAVIVTLLXXXXXXXLVSMLIAQATTTIVSTAG-DYSRSFGDMAKKILQPIEEYFYKEDLLPKPLPAPNEPGSQAPAKVVGPVQSEPVLLELFSRVDDSNKPAVMDVKPQLDRPGVEDSNKVRDSNEAAVPGLEPNALAKKERPIGDIIGQIIKDLRNYIFNIVTNAFGTIFGLISSVFLVCIFVIFLLAGRNPYTE-HSQVYKDVMQKIRRYVGTKVVISAATGVLVWASLTIIGLKLAGVFGVL 308
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Match: A0A1U9NQT4_9BACT (Transport of quorum-sensing signal protein n=1 Tax=Anaerohalosphaera lusitana TaxID=1936003 RepID=A0A1U9NQT4_9BACT) HSP 1 Score: 83.2 bits (204), Expect = 1.530e-14 Identity = 80/282 (28.37%), Postives = 139/282 (49.29%), Query Frame = 1 Query: 16 EQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIVDLLVLRWKMPHIVAISATLLLVLSVGFLLIIVLIYSTQQVIAKAETQYSEKLGIFINSTFDTAKELGEPKPEEAEESSEDSAAEAEPAVAEXXXXXXXXXXXXXXXXXXXXXXSAAPVEAQKPPAGWFENMGVDLNKLQKMTTDYMTQFLKEVAFSTMQTALSFTTTSFFVAIFVIFLLAGRDPQAVVKNKLYFEIEQKIRSYITTKLIISLVTGILVGVTLSLFGLELALVFAIL 861 E ++T CL++L+++A+A V + T+ ++IPFV++IFIV++V+P++D V++ K +A+ TLL+VL+V + + + Q V++ + Y + + F + F V+ FE G+DL+ Q + + + + + T T + F ++ V+IFVIFLL+GR+P V++ +Y +I+ IR YI TK+IIS +TG+LV + L + GLELA VF +L Sbjct: 19 EHFWLMTICLLILAMVAIAMVLHYTQTIMIPFVLSIFIVSLVSPLLDYQVIKLKFNRTMAVCITLLVVLTVIVATCLAVSEAVQTVVSTVKP-YMDSVETFTDKVF---------------------------------------------------------VQ--------FEEWGLDLS--QDSVMEELRKKIPNLVTDTFDTVMGFVSSFVLVSIFVIFLLSGRNPH-VIRKGVYADIDNGIRRYIGTKVIISSITGVLVYIILRVLGLELAAVFGML 231 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85494.19929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85494.19929.1 >prot_M-pyrifera_M_contig85494.19929.1 ID=prot_M-pyrifera_M_contig85494.19929.1|Name=mRNA_M-pyrifera_M_contig85494.19929.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=287bp LQPSDEQAKVITGCLMLLSVIALAFVFYITKAVLIPFVIAIFIVTIVTPIback to top mRNA from alignment at M-pyrifera_M_contig85494:1..861- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85494.19929.1 ID=mRNA_M-pyrifera_M_contig85494.19929.1|Name=mRNA_M-pyrifera_M_contig85494.19929.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=861bp|location=Sequence derived from alignment at M-pyrifera_M_contig85494:1..861- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85494:1..861- >mRNA_M-pyrifera_M_contig85494.19929.1 ID=mRNA_M-pyrifera_M_contig85494.19929.1|Name=mRNA_M-pyrifera_M_contig85494.19929.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1722bp|location=Sequence derived from alignment at M-pyrifera_M_contig85494:1..861- (Macrocystis pyrifera P11B4 male)back to top |