mRNA_M-pyrifera_M_contig85440.19918.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85440.19918.1 vs. uniprot
Match: A0A8J7CZG2_DESMC (Cupin-like domain-containing protein n=1 Tax=Desmonostoc muscorum LEGE 12446 TaxID=1828758 RepID=A0A8J7CZG2_DESMC) HSP 1 Score: 56.6 bits (135), Expect = 3.040e-8 Identity = 22/61 (36.07%), Postives = 39/61 (63.93%), Query Frame = 1 Query: 4 LAGTKSWIVCPPSDSPFLYDGSRFDAFRPDMDRFPLLKKASCMRGTVHPGELLIYGKLWWH 186 ++G+K +++ P F+YDG + DAF+PD+++FPL A + ++ GE+L +WWH Sbjct: 65 ISGSKRFVLLSPDQQKFVYDG-QVDAFKPDLEKFPLYANAKPVEFLLNSGEILYIPSMWWH 124
BLAST of mRNA_M-pyrifera_M_contig85440.19918.1 vs. uniprot
Match: A0A1D8TM94_9CYAN (Uncharacterized protein n=9 Tax=Moorena TaxID=1155738 RepID=A0A1D8TM94_9CYAN) HSP 1 Score: 57.8 bits (138), Expect = 3.260e-8 Identity = 27/63 (42.86%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 1 QLAGTKSWIVCPPSDSPFLYDGSRFDAFRPDMDRFPLLKKASCMRGTV-HPGELLIYGKLWWH 186 Q++G K WI+ PP D ++YDG + D PD+ ++PL AS V PGE+LI WWH Sbjct: 442 QISGRKRWIIHPPEDEKWMYDG-QVDLTNPDLVKYPLYMNASAPYDFVLEPGEVLILPNAWWH 503
BLAST of mRNA_M-pyrifera_M_contig85440.19918.1 vs. uniprot
Match: A0A8E0L3U0_BURTH (JmjC domain protein n=4 Tax=Burkholderia TaxID=32008 RepID=A0A8E0L3U0_BURTH) HSP 1 Score: 57.4 bits (137), Expect = 3.300e-8 Identity = 25/61 (40.98%), Postives = 33/61 (54.10%), Query Frame = 1 Query: 4 LAGTKSWIVCPPSDSPFLYDGSRFDAFRPDMDRFPLLKKASCMRGTVHPGELLIYGKLWWH 186 G+K W+V P + +Y G+ DAFRPD+DRFPL A PGE++ WWH Sbjct: 160 FVGSKRWLVYSPDQAQCMYRGA-VDAFRPDLDRFPLFANARAHMHVQQPGEIVYMPATWWH 219
BLAST of mRNA_M-pyrifera_M_contig85440.19918.1 vs. uniprot
Match: G4M3V4_9BURK (JmjC domain protein n=2 Tax=Candidatus Paraburkholderia kirkii TaxID=198822 RepID=G4M3V4_9BURK) HSP 1 Score: 56.2 bits (134), Expect = 8.730e-8 Identity = 24/61 (39.34%), Postives = 32/61 (52.46%), Query Frame = 1 Query: 4 LAGTKSWIVCPPSDSPFLYDGSRFDAFRPDMDRFPLLKKASCMRGTVHPGELLIYGKLWWH 186 G+K W P + ++Y G+ DAFRPD+DRFPL A PGE++ WWH Sbjct: 160 FVGSKRWFAYSPDQAQYMYRGA-VDAFRPDLDRFPLFAHARAHIHVQQPGEIMYIPATWWH 219
BLAST of mRNA_M-pyrifera_M_contig85440.19918.1 vs. uniprot
Match: UPI00112D7B35 (HSPB1-associated protein 1 isoform X2 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112D7B35) HSP 1 Score: 56.2 bits (134), Expect = 1.130e-7 Identity = 25/72 (34.72%), Postives = 38/72 (52.78%), Query Frame = 1 Query: 1 QLAGTKSWIVCPPSDSPFLYDG----------SRFDAFRPDMDRFPLLKKASCMRGTVHPGELLIYGKLWWH 186 Q+ G K W + PP D+ FLY S+ + PD++RFP + A T+HPG++L+ + WWH Sbjct: 175 QVQGRKRWHLFPPEDTAFLYPTRIPYEESSVFSKVNVVNPDLNRFPQFRNAQAHVVTLHPGQVLVVPRHWWH 246
BLAST of mRNA_M-pyrifera_M_contig85440.19918.1 vs. uniprot
Match: UPI00112B1665 (HSPB1-associated protein 1 isoform X1 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112B1665) HSP 1 Score: 56.2 bits (134), Expect = 1.130e-7 Identity = 25/72 (34.72%), Postives = 38/72 (52.78%), Query Frame = 1 Query: 1 QLAGTKSWIVCPPSDSPFLYDG----------SRFDAFRPDMDRFPLLKKASCMRGTVHPGELLIYGKLWWH 186 Q+ G K W + PP D+ FLY S+ + PD++RFP + A T+HPG++L+ + WWH Sbjct: 195 QVQGRKRWHLFPPEDTAFLYPTRIPYEESSVFSKVNVVNPDLNRFPQFRNAQAHVVTLHPGQVLVVPRHWWH 266
BLAST of mRNA_M-pyrifera_M_contig85440.19918.1 vs. uniprot
Match: A0A1B8Y1H7_XENTR (JmjC domain-containing protein n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A1B8Y1H7_XENTR) HSP 1 Score: 55.8 bits (133), Expect = 1.540e-7 Identity = 25/72 (34.72%), Postives = 38/72 (52.78%), Query Frame = 1 Query: 1 QLAGTKSWIVCPPSDSPFLYDG----------SRFDAFRPDMDRFPLLKKASCMRGTVHPGELLIYGKLWWH 186 Q+ G K+W + PP D+P +Y S+ + PD RFPL + S T+HPG++L+ + WWH Sbjct: 149 QVQGRKTWHLYPPGDTPHMYPTRIPYEESSIFSKVNVVNPDRSRFPLFSRTSPHVVTLHPGQVLLVPRHWWH 220
BLAST of mRNA_M-pyrifera_M_contig85440.19918.1 vs. uniprot
Match: A0A803JBG1_XENTR (HSPB (heat shock 27kDa)-associated protein 1 n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A803JBG1_XENTR) HSP 1 Score: 55.8 bits (133), Expect = 1.540e-7 Identity = 25/72 (34.72%), Postives = 38/72 (52.78%), Query Frame = 1 Query: 1 QLAGTKSWIVCPPSDSPFLYDG----------SRFDAFRPDMDRFPLLKKASCMRGTVHPGELLIYGKLWWH 186 Q+ G K+W + PP D+P +Y S+ + PD RFPL + S T+HPG++L+ + WWH Sbjct: 175 QVQGRKTWHLYPPGDTPHMYPTRIPYEESSIFSKVNVVNPDRSRFPLFSRTSPHVVTLHPGQVLLVPRHWWH 246
BLAST of mRNA_M-pyrifera_M_contig85440.19918.1 vs. uniprot
Match: UPI00064AF70C (HSPB1-associated protein 1 n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI00064AF70C) HSP 1 Score: 54.3 bits (129), Expect = 5.420e-7 Identity = 26/72 (36.11%), Postives = 37/72 (51.39%), Query Frame = 1 Query: 1 QLAGTKSWIVCPPSDSPFLYDG----------SRFDAFRPDMDRFPLLKKASCMRGTVHPGELLIYGKLWWH 186 Q+ G K W + PP D+PFLY S+ + PD+ RFP KA +HPG++L+ + WWH Sbjct: 179 QVQGRKRWHLFPPEDTPFLYPTRIPYEESSVFSKINVTNPDLKRFPQFWKARRHVVILHPGQVLLVPRHWWH 250
BLAST of mRNA_M-pyrifera_M_contig85440.19918.1 vs. uniprot
Match: A0A0Q6X4A2_9BURK (Transcription factor jumonji n=1 Tax=Rhizobacter sp. Root1221 TaxID=1736433 RepID=A0A0Q6X4A2_9BURK) HSP 1 Score: 53.5 bits (127), Expect = 9.850e-7 Identity = 23/69 (33.33%), Postives = 36/69 (52.17%), Query Frame = 1 Query: 1 QLAGTKSWIVCPPSDSPFLYDGSRF-------DAFRPDMDRFPLLKKASCMRGTVHPGELLIYGKLWWH 186 ++ G K +++ PP D P LY + + PD+ RFPLL KA+ R + PG+++ WWH Sbjct: 174 EVYGDKEFVMFPPEDGPLLYANPKLPNRSLIDNLNEPDLQRFPLLAKATRYRAVLRPGDMVFVPSRWWH 242 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85440.19918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85440.19918.1 >prot_M-pyrifera_M_contig85440.19918.1 ID=prot_M-pyrifera_M_contig85440.19918.1|Name=mRNA_M-pyrifera_M_contig85440.19918.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=62bp QLAGTKSWIVCPPSDSPFLYDGSRFDAFRPDMDRFPLLKKASCMRGTVHPback to top mRNA from alignment at M-pyrifera_M_contig85440:24..209+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85440.19918.1 ID=mRNA_M-pyrifera_M_contig85440.19918.1|Name=mRNA_M-pyrifera_M_contig85440.19918.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=186bp|location=Sequence derived from alignment at M-pyrifera_M_contig85440:24..209+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85440:24..209+ >mRNA_M-pyrifera_M_contig85440.19918.1 ID=mRNA_M-pyrifera_M_contig85440.19918.1|Name=mRNA_M-pyrifera_M_contig85440.19918.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=372bp|location=Sequence derived from alignment at M-pyrifera_M_contig85440:24..209+ (Macrocystis pyrifera P11B4 male)back to top |