mRNA_M-pyrifera_M_contig85150.19844.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85150.19844.1 vs. uniprot
Match: UPI001BD635FA (glycosyltransferase n=1 Tax=Nocardioides aquaticus TaxID=160826 RepID=UPI001BD635FA) HSP 1 Score: 103 bits (258), Expect = 1.160e-24 Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 4 IAVVHEWVSARAGSEQVFERLARNFPTADLFALTTDPDVALDTGDREIRTSYLQRSARLRSNRALTLPLMPHAWNRISRGAKYDLIV 264 +A+ HEW+SARAGSE+VFE LA +P ADL+ALT P V L+TG R +RT++L R +R R LTLPLMP AW G +YD +V Sbjct: 9 MAIAHEWISARAGSEKVFEALAATYPEADLYALTRTPGVDLETGGRPVRTTFLDRLGPIRDRRGLTLPLMPLAWRNAGGGRRYDTVV 95
BLAST of mRNA_M-pyrifera_M_contig85150.19844.1 vs. uniprot
Match: A0A4S5ADQ2_9ACTN (Glycosyltransferase family 4 protein n=2 Tax=Nocardioides sp. TaxID=35761 RepID=A0A4S5ADQ2_9ACTN) HSP 1 Score: 99.4 bits (246), Expect = 7.740e-23 Identity = 49/88 (55.68%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 1 RIAVVHEWVSARAGSEQVFERLARNFPTADLFALTTDPDVALDTGDREIRTSYLQRSARLRSNRALTLPLMPHAWNRISRGAKYDLIV 264 R+A+ HEWVSARAGSE+VFE LAR F ADL+ALT P V LDT R+IRT+ L R LR R L LP+MP AW ++ +YD ++ Sbjct: 22 RMAIAHEWVSARAGSEKVFEELARVFTEADLYALTMTPGVELDTDARDIRTTILDRLGTLRDRRDLLLPVMPLAWRVMATNERYDTVI 109
BLAST of mRNA_M-pyrifera_M_contig85150.19844.1 vs. uniprot
Match: UPI00141363F7 (glycosyltransferase n=1 Tax=Kineococcus indalonis TaxID=2696566 RepID=UPI00141363F7) HSP 1 Score: 97.1 bits (240), Expect = 5.810e-22 Identity = 50/88 (56.82%), Postives = 60/88 (68.18%), Query Frame = 1 Query: 1 RIAVVHEWVSARAGSEQVFERLARNFPTADLFALTTDPDVALDTGDREIRTSYLQRSARLRSNRALTLPLMPHAWNRISRGAKYDLIV 264 R AVVHEWV+ARAG+EQVFE LA +P ADL+AL+ P V L+ G R +RT+ L R RA TLPLMP AW + RG YDL+V Sbjct: 21 RTAVVHEWVAARAGAEQVFEALAATWPEADLYALSRAPGVPLELGGRTVRTTALDHPL-TRDRRAATLPLMPLAWRALGRGQGYDLVV 107
BLAST of mRNA_M-pyrifera_M_contig85150.19844.1 vs. uniprot
Match: A0A8F9WQM5_9MYCO (Glycosyltransferase n=1 Tax=Mycobacterium pallens TaxID=370524 RepID=A0A8F9WQM5_9MYCO) HSP 1 Score: 96.3 bits (238), Expect = 9.960e-22 Identity = 50/88 (56.82%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 1 RIAVVHEWVSARAGSEQVFERLARNFPTADLFALTTDPDVALDTGDREIRTSYLQRSARLRSNRALTLPLMPHAWNRISRGAKYDLIV 264 R+AVVHEWV A GS+QVFE LA+ P+ADL+AL+ PDV LD G R T++L SA LRS R LTLPLMP AW ++ YDL++ Sbjct: 14 RVAVVHEWVDAYTGSDQVFEALAKLIPSADLYALSLQPDVQLDFGGRTATTTFLD-SATLRSRRGLTLPLMPLAWRKLG-SHNYDLVI 99
BLAST of mRNA_M-pyrifera_M_contig85150.19844.1 vs. uniprot
Match: UPI001F57C2FD (glycosyltransferase n=1 Tax=Kineococcus sp. TRM81007 TaxID=2925831 RepID=UPI001F57C2FD) HSP 1 Score: 96.3 bits (238), Expect = 1.150e-21 Identity = 52/88 (59.09%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 1 RIAVVHEWVSARAGSEQVFERLARNFPTADLFALTTDPDVALDTGDREIRTSYLQRSARLRSNRALTLPLMPHAWNRISRGAKYDLIV 264 R AVVHEWV+ARAG+EQVFE LA +P ADL+AL+ P LD R +RT+ L R+A R RALTLPLMP AW + RG YDL+V Sbjct: 22 RTAVVHEWVAARAGAEQVFEALAGTWPDADLYALSRAPGTHLDVQGRPVRTTALDRAA-TRERRALTLPLMPLAWRALGRG-DYDLVV 107
BLAST of mRNA_M-pyrifera_M_contig85150.19844.1 vs. uniprot
Match: UPI0015CB15BC (glycosyltransferase n=2 Tax=Nocardioides marinisabuli TaxID=419476 RepID=UPI0015CB15BC) HSP 1 Score: 91.7 bits (226), Expect = 4.510e-20 Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 7 AVVHEWVSARAGSEQVFERLARNFPTADLFALTTDPDVALDTGDREIRTSYLQRSARLRSNRALTLPLMPHAWNRISRGAKYDLIV 264 A+ HEW+SARAGSE+VFE LA +P ADL++LT P V L+T R I TS++ R LR NR +LPLMP AW + + +YD ++ Sbjct: 4 AIAHEWISARAGSEKVFEALADIYPQADLYSLTHTPGVPLETQGRPIETSFIDRVDFLRDNRNFSLPLMPLAWRMLGKHNQYDRVL 89
BLAST of mRNA_M-pyrifera_M_contig85150.19844.1 vs. uniprot
Match: A0A2T0QYG0_9ACTN (Glycosyltransferase involved in cell wall biosynthesis n=2 Tax=Kineococcus rhizosphaerae TaxID=559628 RepID=A0A2T0QYG0_9ACTN) HSP 1 Score: 89.4 bits (220), Expect = 4.170e-19 Identity = 50/90 (55.56%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 1 RIAVVHEWVSARAGSEQVFERLARNFPTADLFALTTDPDVALDTGDREIRTSYLQRSARLRSNRALTLPLMPHAWNRISRGAK--YDLIV 264 R A+VHEW++ARAG+EQVFE LA +P ADL ALT +P V LD G R +RT+ L R +RALTLPLMP AW +R + YDL+V Sbjct: 12 RTALVHEWIAARAGAEQVFEVLAGLWPRADLHALTAEPGVRLDLGGRAVRTTALDP---WRHHRALTLPLMPAAWAAHARDVQRSYDLVV 98
BLAST of mRNA_M-pyrifera_M_contig85150.19844.1 vs. uniprot
Match: UPI0014134086 (glycosyltransferase n=1 Tax=Kineococcus vitellinus TaxID=2696565 RepID=UPI0014134086) HSP 1 Score: 88.6 bits (218), Expect = 7.820e-19 Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 1 RIAVVHEWVSARAGSEQVFERLARNFPTADLFALTTDPDVALDTGDREIRTSYLQRSARLRSNRALTLPLMPHAWNRISRGA--KYDLIV 264 R A+VHEW++ARAG+EQVFE LA +P ADL AL+ P V L+ G R +RT+ L +A LR RAL LPLMP AW +R +YDL+V Sbjct: 18 RTALVHEWIAARAGAEQVFEVLAGMWPQADLHALSAAPGVRLELGGRRVRTTALD-AAPLRERRALALPLMPLAWRAHAREVQGRYDLVV 106
BLAST of mRNA_M-pyrifera_M_contig85150.19844.1 vs. uniprot
Match: A6W3X2_KINRD (Glycosyl transferase group 1 n=2 Tax=Kineococcus radiotolerans TaxID=131568 RepID=A6W3X2_KINRD) HSP 1 Score: 85.1 bits (209), Expect = 1.300e-17 Identity = 48/90 (53.33%), Postives = 60/90 (66.67%), Query Frame = 1 Query: 1 RIAVVHEWVSARAGSEQVFERLARNFPTADLFALTTDPDVALDTGDREIRTSYLQRSARLRSNRALTLPLMPHAWNRISRGAK--YDLIV 264 R A+VHEW+SARAG+EQVFE LA FP ADL AL+ +P V LD R +RT+ L LR +RAL LPLM AW +R + YDL++ Sbjct: 9 RTALVHEWISARAGAEQVFEVLAGQFPHADLHALSCEPGVDLDLAGRTVRTTALDA---LRGHRALALPLMAPAWWAHARDVRGGYDLVL 95
BLAST of mRNA_M-pyrifera_M_contig85150.19844.1 vs. uniprot
Match: A0A1Y6CSE3_9GAMM (Uncharacterized protein n=2 Tax=Methylomagnum ishizawai TaxID=1760988 RepID=A0A1Y6CSE3_9GAMM) HSP 1 Score: 67.0 bits (162), Expect = 4.870e-11 Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 1 RIAVVHEWVSARAGSEQVFERLARNFPTADLFALTTDPDVALDTGDR------EIRTSYLQRSARLRSNRALTLPLMPHAWNRISRGAKYDLIV 264 R+AVVHEW+ +RAGSE+V E++ + +P ADLFAL LD G+R + RTS++QR R R+ LPLMP A + + YDL++ Sbjct: 32 RVAVVHEWLVSRAGSEKVLEQILKVYPQADLFALVD----FLDEGERAFLEGRQARTSFIQRLPRARTCYRHYLPLMPLAVEQFDV-SDYDLVI 120 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85150.19844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85150.19844.1 >prot_M-pyrifera_M_contig85150.19844.1 ID=prot_M-pyrifera_M_contig85150.19844.1|Name=mRNA_M-pyrifera_M_contig85150.19844.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp RIAVVHEWVSARAGSEQVFERLARNFPTADLFALTTDPDVALDTGDREIRback to top mRNA from alignment at M-pyrifera_M_contig85150:605..868+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85150.19844.1 ID=mRNA_M-pyrifera_M_contig85150.19844.1|Name=mRNA_M-pyrifera_M_contig85150.19844.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=264bp|location=Sequence derived from alignment at M-pyrifera_M_contig85150:605..868+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85150:605..868+ >mRNA_M-pyrifera_M_contig85150.19844.1 ID=mRNA_M-pyrifera_M_contig85150.19844.1|Name=mRNA_M-pyrifera_M_contig85150.19844.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig85150:605..868+ (Macrocystis pyrifera P11B4 male)back to top |