mRNA_M-pyrifera_M_contig84970.19807.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84970.19807.1 vs. uniprot
Match: A0A482RAG7_9EURY (Uncharacterized protein (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A482RAG7_9EURY) HSP 1 Score: 71.2 bits (173), Expect = 6.540e-12 Identity = 58/160 (36.25%), Postives = 72/160 (45.00%), Query Frame = 1 Query: 4 YRDGRWVRLPPQLLVEGDVIALQQGETSPAHV-------------------------------RSLDGPSAAGREL-------AAGEFVEVE--------GERRPVGKGGDAWRRS--SVVLSLCNDLRRFLVLETPAKARARALLRAPQRPQPSLVREL 339 YRDG+WVRLPP LLV+GD+IAL E +P V RS D +A R+L AA V E E +G A +RS S VL+LC D+RRF++LETP + LRAP RPQP +L Sbjct: 216 YRDGQWVRLPPLLLVKGDLIALMANENAPGRVKPVEQRAGSGGPALPRAPVTQPAVDALAGAVRSGDDVAARVRQLSVTSVATAASHSVPPETSKAGALPSEAEAEARGVAALQRSIDSNVLTLCGDMRRFVLLETPLVNTLQKRLRAPHRPQPLFFHQL 375
BLAST of mRNA_M-pyrifera_M_contig84970.19807.1 vs. uniprot
Match: A0A2D4BWP2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWP2_PYTIN) HSP 1 Score: 65.9 bits (159), Expect = 5.220e-10 Identity = 40/102 (39.22%), Postives = 53/102 (51.96%), Query Frame = 1 Query: 4 YRDGRWVRLPPQLLVEGDVIALQQGETSPAHVRSLDGPSAAGRELAAG--EFVEVEGERRPVGKGG-----------DAWRRSSVVLSLCNDLRRFLVLETP 270 YRD +W RLP LLVEGDV+AL G+ +P VR LD A + G E V G + P + +A + ++LSLC D+R F +LETP Sbjct: 228 YRDQQWQRLPMNLLVEGDVVALMSGDVAPGDVRPLDVHREASSSASGGATELVFARGTKLPASQSQHEPSLQHAARCNATFNAPLLLSLCGDMRVFEMLETP 329
BLAST of mRNA_M-pyrifera_M_contig84970.19807.1 vs. uniprot
Match: A0A8K1CDX3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDX3_PYTOL) HSP 1 Score: 62.8 bits (151), Expect = 6.260e-9 Identity = 39/93 (41.94%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 4 YRDGRWVRLPPQLLVEGDVIALQQGETSPAHVRSLDGPSAAGRELAAGEF---VEVEGERRPVGKGG-DAWRRSSVVLSLCNDLRRFLVLETP 270 YRD +W RL LLV+GDVIAL G+ +P VR+L P A E A F + P+ +A S++LSLC D+R F++LETP Sbjct: 192 YRDSQWQRLTMNLLVDGDVIALMSGDVAPGDVRALTDPPAT--ESMAAVFPRGATIPSSSEPLETTRCNATFNPSLLLSLCGDMRVFVMLETP 282
BLAST of mRNA_M-pyrifera_M_contig84970.19807.1 vs. uniprot
Match: A0A448Z4X5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4X5_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 8.310e-9 Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 10 DGRWVRLPPQLLVEGDVIALQQGETSPAHVRSLDGPSA-----AGREL----AAGEFVEVEGERRPVGKGGDAWRRSSVVLSLCNDLRRFLVLETPAKARARALLRAPQR 312 +G W R+P LLV+GD IALQ G++ PA R L+G + G+E+ ++GE V E G+ S +L LCND+R F VLETP ++ LR PQR Sbjct: 204 EGSWSRIPTLLLVKGDRIALQVGDSVPAECRVLEGKKSXTFFQVGQEITLESSSGESVSSLVEELSRGRTTLPSHDSDGLLRLCNDVRLFEVLETPLES----FLREPQR 309
BLAST of mRNA_M-pyrifera_M_contig84970.19807.1 vs. uniprot
Match: A0A024GIN4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GIN4_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 5.460e-8 Identity = 34/92 (36.96%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 4 YRDGRWVRLPPQLLVEGDVIALQQGETSPAHVRSLDGPSAA---GRELAAGEFVEVEGERRPVGKGGDAWRRSSVVLSLCNDLRRFLVLETP 270 YRD +W R+P LL +GDVIAL G+T+P V+ LD + R + ++ +R + +A R+ ++LSLC D+R F++ ETP Sbjct: 131 YRDAQWQRIPTNLLAKGDVIALTNGDTAPGDVQMLDHDTNTKQNARIFKRDSQILIQEKRNDTVRC-NATFRTELLLSLCGDMRIFIMKETP 221
BLAST of mRNA_M-pyrifera_M_contig84970.19807.1 vs. uniprot
Match: F0W418_9STRA (Uncharacterized protein AlNc14C15G1707 n=8 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W418_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 4.800e-7 Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 1 Query: 4 YRDGRWVRLPPQLLVEGDVIALQQGETSPAHVRSLDGPSAAGRELAA--GEFVEVEGERRPVGKGGDAWRRSSVVLSLCNDLRRFLVLETP 270 YRD +W R+P LL +GDVIAL G+T+P V+ LD R + E + E+R +A + ++LSLC D+R F++ ETP Sbjct: 196 YRDLQWQRIPTNLLAKGDVIALTNGDTAPGDVQMLDHDINTKRNARSFKRECQILVQEKRNDTVRCNATFKPELLLSLCGDMRIFIMEETP 286
BLAST of mRNA_M-pyrifera_M_contig84970.19807.1 vs. uniprot
Match: A0A0P1AG98_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AG98_PLAHL) HSP 1 Score: 53.9 bits (128), Expect = 7.830e-6 Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = 1 Query: 4 YRDGRWVRLPPQLLVEGDVIALQQGETSPAHVRSLD-GPSAAGRELAAGEFVEVEGERRPVGKGGDAWRRSS-----VVLSLCNDLRRFLVLETP 270 YRD +WVRLP LLVEGDV+ L G+ +P V+S++ + A G + R G D R ++ ++L LC ++R F +LETP Sbjct: 201 YRDNQWVRLPMNLLVEGDVVGLMSGDIAPGDVQSVETNQNEQCHVYARGCKLPSWNSRH----GKDTTRCTATFDPPLLLKLCGEMRIFEMLETP 291 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84970.19807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84970.19807.1 >prot_M-pyrifera_M_contig84970.19807.1 ID=prot_M-pyrifera_M_contig84970.19807.1|Name=mRNA_M-pyrifera_M_contig84970.19807.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp VYRDGRWVRLPPQLLVEGDVIALQQGETSPAHVRSLDGPSAAGRELAAGEback to top mRNA from alignment at M-pyrifera_M_contig84970:353..727- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84970.19807.1 ID=mRNA_M-pyrifera_M_contig84970.19807.1|Name=mRNA_M-pyrifera_M_contig84970.19807.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=375bp|location=Sequence derived from alignment at M-pyrifera_M_contig84970:353..727- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84970:353..727- >mRNA_M-pyrifera_M_contig84970.19807.1 ID=mRNA_M-pyrifera_M_contig84970.19807.1|Name=mRNA_M-pyrifera_M_contig84970.19807.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig84970:353..727- (Macrocystis pyrifera P11B4 male)back to top |