mRNA_M-pyrifera_M_contig84963.19805.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84963.19805.1 vs. uniprot
Match: A0A812L9C5_9DINO (RPL6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812L9C5_9DINO) HSP 1 Score: 84.0 bits (206), Expect = 1.030e-18 Identity = 49/71 (69.01%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 1 MPK---VDARQRFYGADHEGRPSARP-APRKTKLRSSITPGTVLIVLAGRFRGKRVVFLQQLPSGLLLVTG 201 MP+ V+ R RFY AD P R P+ TKLR+SITPGTVLIVLAGRFRGKRVVFL+QL SGLLLVTG Sbjct: 1 MPRSAAVEKRSRFYPADDVRTPLNRNFTPKPTKLRASITPGTVLIVLAGRFRGKRVVFLKQLESGLLLVTG 71
BLAST of mRNA_M-pyrifera_M_contig84963.19805.1 vs. uniprot
Match: A0A383W8J8_TETOB (Uncharacterized protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383W8J8_TETOB) HSP 1 Score: 84.3 bits (207), Expect = 1.720e-18 Identity = 47/60 (78.33%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 25 RFYGADHEGRPSARPAPRK-TKLRSSITPGTVLIVLAGRFRGKRVVFLQQLPSGLLLVTG 201 RFY AD +P A A RK TKLRSSITPGTVLI+LAGRF+GKRVVFL QLPSGLLLVTG Sbjct: 56 RFYPADDVAKPLAHNAVRKPTKLRSSITPGTVLILLAGRFKGKRVVFLGQLPSGLLLVTG 115
BLAST of mRNA_M-pyrifera_M_contig84963.19805.1 vs. uniprot
Match: A0A2K3JN89_TRIPR (60S ribosomal protein l6-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JN89_TRIPR) HSP 1 Score: 80.9 bits (198), Expect = 5.280e-18 Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 1 Query: 10 VDARQRFYGADHEGRPSA-RPAPRKTKLRSSITPGTVLIVLAGRFRGKRVVFLQQLPSGLLLVTG 201 V+ +FY AD +P + P+ TKLR+SITPGTVLI+LAGRF+GKRVVFL+QLPSGLLLVTG Sbjct: 58 VEKPPKFYPADDVKKPLRNKHKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 122
BLAST of mRNA_M-pyrifera_M_contig84963.19805.1 vs. uniprot
Match: A0A699ZFE9_HAELA (Component of cytosolic 80S ribosome and 60S large subunit (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZFE9_HAELA) HSP 1 Score: 82.0 bits (201), Expect = 6.290e-18 Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 25 RFYGADHEGRPSARPAPRK-TKLRSSITPGTVLIVLAGRFRGKRVVFLQQLPSGLLLVTG 201 RFY AD +P + A K TKLRSSITPGTVLI+LAGRF+GKRVVFL+QLPSGLLLVTG Sbjct: 56 RFYPADDVPKPLSHKAVHKPTKLRSSITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTG 115
BLAST of mRNA_M-pyrifera_M_contig84963.19805.1 vs. uniprot
Match: UPI00125D482B (60S ribosomal protein L6-like n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125D482B) HSP 1 Score: 82.8 bits (203), Expect = 7.370e-18 Identity = 44/67 (65.67%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 4 PKVDARQRFYGADHEGRPSA-RPAPRKTKLRSSITPGTVLIVLAGRFRGKRVVFLQQLPSGLLLVTG 201 P + +FY AD +P + P+ TKLRSSITPGTVLI+LAGRF+GKRVVFL+QLPSGLLLVTG Sbjct: 52 PAAEKPPKFYPADDVKKPLVNKHKPKLTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 118
BLAST of mRNA_M-pyrifera_M_contig84963.19805.1 vs. uniprot
Match: A0A1M2V930_TRAPU (60S ribosomal protein L6 n=2 Tax=Trametes TaxID=5324 RepID=A0A1M2V930_TRAPU) HSP 1 Score: 82.8 bits (203), Expect = 8.630e-18 Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = 1 Query: 25 RFYGADHEGRPS-ARPAPRKTKLRSSITPGTVLIVLAGRFRGKRVVFLQQLPSGLLLVTG 201 RFY A+ +P +R AP+ TKLRSSITPGTVLI+LAGRFRGKRVVFL+QL SGLLLVTG Sbjct: 66 RFYPAEDVRQPKKSRKAPKPTKLRSSITPGTVLILLAGRFRGKRVVFLKQLDSGLLLVTG 125
BLAST of mRNA_M-pyrifera_M_contig84963.19805.1 vs. uniprot
Match: UPI00125E8FB3 (60S ribosomal protein L6-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E8FB3) HSP 1 Score: 82.4 bits (202), Expect = 1.000e-17 Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 1 Query: 4 PKVDARQRFYGADHEGRPSA-RPAPRKTKLRSSITPGTVLIVLAGRFRGKRVVFLQQLPSGLLLVTG 201 P + +FY AD +P + P++TKLRSSITPGTVLI+L+GRF+GKRVVFL+QLPSGLLLVTG Sbjct: 50 PAAEKPPKFYPADDVKKPLMNKHKPKQTKLRSSITPGTVLIILSGRFKGKRVVFLKQLPSGLLLVTG 116
BLAST of mRNA_M-pyrifera_M_contig84963.19805.1 vs. uniprot
Match: A0A2Z7BZ57_9LAMI (Ribosomal_L6e_N domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BZ57_9LAMI) HSP 1 Score: 82.4 bits (202), Expect = 1.110e-17 Identity = 44/67 (65.67%), Postives = 53/67 (79.10%), Query Frame = 1 Query: 4 PKVDARQRFYGADHEGRP-SARPAPRKTKLRSSITPGTVLIVLAGRFRGKRVVFLQQLPSGLLLVTG 201 P + Q+FY AD +P S + P+ TKLR+SITPGTVLI+LAGRF+GKRVVFL+QL SGLLLVTG Sbjct: 56 PVAEKPQKFYPADDVKKPLSNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLLVTG 122
BLAST of mRNA_M-pyrifera_M_contig84963.19805.1 vs. uniprot
Match: A0A1J3EMR0_NOCCA (60S ribosomal protein L6-3 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3EMR0_NOCCA) HSP 1 Score: 79.3 bits (194), Expect = 1.280e-17 Identity = 45/67 (67.16%), Postives = 50/67 (74.63%), Query Frame = 1 Query: 7 KVDARQRFYGADHEGRP--SARPAPRKTKLRSSITPGTVLIVLAGRFRGKRVVFLQQLPSGLLLVTG 201 K R+Y AD RP S + + T+LRSSITPGTVLIVLAGRFRGKRVVFL+QL SGLLLVTG Sbjct: 29 KKQGEPRWYAADDVKRPIPSRKSHAKPTRLRSSITPGTVLIVLAGRFRGKRVVFLKQLASGLLLVTG 95
BLAST of mRNA_M-pyrifera_M_contig84963.19805.1 vs. uniprot
Match: A0A068UR64_COFCA (60S ribosomal protein L6 n=2 Tax=Coffea TaxID=13442 RepID=A0A068UR64_COFCA) HSP 1 Score: 82.0 bits (201), Expect = 1.560e-17 Identity = 44/67 (65.67%), Postives = 53/67 (79.10%), Query Frame = 1 Query: 4 PKVDARQRFYGADHEGRPSA-RPAPRKTKLRSSITPGTVLIVLAGRFRGKRVVFLQQLPSGLLLVTG 201 P V+ +FY AD +P A + P+ TKLR+SITPGTVLI+LAGRF+GKRVVFL+QL SGLLLVTG Sbjct: 56 PAVEKPAKFYPADDVKKPLANKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLLVTG 122 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84963.19805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84963.19805.1 >prot_M-pyrifera_M_contig84963.19805.1 ID=prot_M-pyrifera_M_contig84963.19805.1|Name=mRNA_M-pyrifera_M_contig84963.19805.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp MPKVDARQRFYGADHEGRPSARPAPRKTKLRSSITPGTVLIVLAGRFRGKback to top mRNA from alignment at M-pyrifera_M_contig84963:555..755+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84963.19805.1 ID=mRNA_M-pyrifera_M_contig84963.19805.1|Name=mRNA_M-pyrifera_M_contig84963.19805.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=201bp|location=Sequence derived from alignment at M-pyrifera_M_contig84963:555..755+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84963:555..755+ >mRNA_M-pyrifera_M_contig84963.19805.1 ID=mRNA_M-pyrifera_M_contig84963.19805.1|Name=mRNA_M-pyrifera_M_contig84963.19805.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=402bp|location=Sequence derived from alignment at M-pyrifera_M_contig84963:555..755+ (Macrocystis pyrifera P11B4 male)back to top |