mRNA_M-pyrifera_M_contig84843.19771.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84843.19771.1 vs. uniprot
Match: A0A7S2RUW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUW1_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.470e-16 Identity = 66/212 (31.13%), Postives = 93/212 (43.87%), Query Frame = 1 Query: 46 AHRSAVTSLRFEDGGLRLASADAAGHVVVWRWRWRDSKDAFTSPSAPESYVPVDITHPSVQDTPIVDIAWRPG----------------RPQLVVCGHRNLLRLFDVGPKSLQPVRAFPSLSNAASHLTIAFSPDGRLLAAGGDSGTLTIWDVDSGVVLLGSARATHAGARIAFPSPLGSVHWSPTEHLVAATSFGDPNPVLLCEPKKRQPV 633 AH + V +L + R+ S DA G VVW WRW S + S PE I P +Q I +A RP R QL++ L L+D+ ++ V + S L FSPDGRL+ AGG+ G++ IWD SG L H + + F P+ + W+P +H VA + G PVL+ +K V Sbjct: 42 AHHTHVNALAIDTDHHRVYSGDAEG--VVWSWRWESSGEDGASDFRPERA----IQPPKLQGRAITSLAMRPKLRVTGASNKGSEVTRRRNQLLIYSQGGFLILYDMSTRT--EVVQYRGAVCKNSRLPATFSPDGRLVLAGGEDGSVGIWDAWSGDSL------HHVFSEVRFTGPIMDISWNPRQHCVALAACGGNFPVLVGYARKNTAV 239
BLAST of mRNA_M-pyrifera_M_contig84843.19771.1 vs. uniprot
Match: A0A3P3YLQ6_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YLQ6_PLABS) HSP 1 Score: 75.9 bits (185), Expect = 2.830e-12 Identity = 51/187 (27.27%), Postives = 89/187 (47.59%), Query Frame = 1 Query: 49 HRSAVTSLRFEDGGLRLASADAAGHVVVWRWRWRDSKDAFTSPSAPESYVPVD-ITHPSVQDTPIVDIAWRPGRPQLVVCGHRNLLRLFDVGPKSLQPVRAFPSLSNAASHLTIAFSPDGRLLAAGGDSGTLTIWDVDSGVVLLGSARATHAGARIAFPSPLGSVHWSPTEHLVAATSFGDPNPVLL 606 H + + S+ + GLR+ + DA+G V W +D P + + PV + HP ++D I + P R +VV +LL +F V L+ V + ++A + FSPDG + +G + G + +W V SG ++ + + + V W P++HL+AA SFG P+++ Sbjct: 576 HDAPINSIAVDQQGLRMWTGDASGSVKSW------DRDL---PQSASRFRPVHRLQHPELKDVAITSVRHDPVRDSIVVMARNHLLYVFGVRRYDLRRVLSGVQCDHSA--IRAQFSPDGAFVVSGSEDGKVHVWRVASGELV--------SQIETGYTAACYGVAWHPSQHLIAACSFGGDYPIMV 743
BLAST of mRNA_M-pyrifera_M_contig84843.19771.1 vs. uniprot
Match: D8LM44_ECTSI (Similar to jouberin isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM44_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 1.760e-11 Identity = 55/188 (29.26%), Postives = 82/188 (43.62%), Query Frame = 1 Query: 49 HRSAVTSLRFEDGGLRLASADAAGHVVVWRWRWRDSKDAFTSPSAPESYVPVDITHPSVQDTPIVDIAWRPG--RPQLVVCGHRNLLRLFDVGPKSLQPVRAFPSLSNAASHLTIAFSPDGRLLAAGGDSGTLTIWDVDSGVVLLGSARATHAGARIAFPSPLGSVHWSPTEHLVAATSFGDPNPVLL 606 H S V ++ ++ RL S D AG +VVWR + + + + H + I +A P R QL+V H N LRL D+G L F + A S + +FSPDGR + +G ++G + +W+ G R + L V W P +H+VA +G PVLL Sbjct: 521 HESHVNAIVYDSRNSRLYSGDGAGVIVVWR------RGGGGQGGVEDYGILRKVQHADLIGKAITSLALAPRLRRGQLLVQAHGNTLRLLDLGTYRLVNP-GFAGGATAKSLIRASFSPDGRFVVSGSETGRVRVWESQEG------KRVKTPLQTLGTACCLRGVGWHPNQHVVALAGYGQDAPVLL 695
BLAST of mRNA_M-pyrifera_M_contig84843.19771.1 vs. uniprot
Match: A2G3I2_TRIVA (Uncharacterized protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2G3I2_TRIVA) HSP 1 Score: 58.5 bits (140), Expect = 2.040e-6 Identity = 45/197 (22.84%), Postives = 85/197 (43.15%), Query Frame = 1 Query: 49 HRSAVTSLRFEDGGLRLASADAAGHVVVWRWRWRDSKDAFTSPSAPESYVPVDITHPSVQDTPIVDIAWRPGRPQLVVCGHRNLLRLFDVGPKSLQPVRAFPSLSNAASHLTIAFSPDGRLLAAGGDSGTLTIWDVDSGVVLLGSARATHAGARIAFPSPLGSVHWSPTEHLVAATSFGDPNPVLLCEPKKRQPVPD 639 ++ V S+ F G L S D++G + V+ R S + + ++D PI ++ L+V N++R+F+ K + P + + ++ FSPD + + AG + GT +W ++ F P+ +V W+P E++VA +SFG P+++ K P+P+ Sbjct: 397 NKGTVNSITFSPDGKTLYSGDSSGQICVFNTDIRGG-------SRHDIVRKLIAKDEEIKDVPITHLSMELSPYSLLVHTRDNVIRIFET--KVMVPSQRYTGTICTKFNIPSVFSPDCQFVLAGSEDGTAKVWAARKADII------ETPEWNFKFDYPVTAVAWNPVENMVAFSSFGPKQPIIIF--KDPTPLPE 576
BLAST of mRNA_M-pyrifera_M_contig84843.19771.1 vs. uniprot
Match: A0A1J4K373_9EUKA (Uncharacterized protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4K373_9EUKA) HSP 1 Score: 57.0 bits (136), Expect = 6.710e-6 Identity = 42/187 (22.46%), Postives = 78/187 (41.71%), Query Frame = 1 Query: 49 HRSAVTSLRFEDGGLRLASADAAGHVVVWRWRWR-DSKDAFTSPSAPESYVPVDITHPSVQDTPIVDIAWRPGRPQLVVCGHRNLLRLFDVGPKSLQPVRAFPSLSNAASHLTIAFSPDGRLLAAGGDSGTLTIWDVDSGVVLLGSARATHAGARIAFPSPLGSVHWSPTEHLVAATSFGDPNPVLL 606 H+ + SL F G L + DA G + W D D F + ++ I + L+V N++R+F+ K + P + + + + FSPDG+ + +G + G++ +W V + + F P+ +V W+ E++VA +SFG+ P+L+ Sbjct: 393 HQVRINSLTFSPDGKALYAGDADGIISSWNTNLEPDGIDGFRRIKL--------VKEGEIEKVSITHVEMGKSNFSLLVHTQDNMIRIFET--KVMVPSQRYSGILCKKFRMISTFSPDGQYILSGSEDGSVMLWTVRKAEPVAVNEWTCK------FDQPVTAVAWNRVENMVAFSSFGESQPILV 563
BLAST of mRNA_M-pyrifera_M_contig84843.19771.1 vs. uniprot
Match: A0A5N4AHG3_PHOPY (Uncharacterized protein n=3 Tax=Photinus pyralis TaxID=7054 RepID=A0A5N4AHG3_PHOPY) HSP 1 Score: 56.6 bits (135), Expect = 9.230e-6 Identity = 53/189 (28.04%), Postives = 89/189 (47.09%), Query Frame = 1 Query: 49 HRSAVTSLRFEDGGLRLASADAAGHVVVWRWRWRDSKDAFTSPSAPESYVPVDITHPSVQDTPIVDIAWRPGRPQLVVCGHRNLLRLFDVGPKSLQPVRAFPSLSNAASHLTIAFSPDGRLLAAGGDSGTLTIWDVDSGVVLLGSARATHAGARIAFPSPLGSVH---WSPTEHLVAATSFGDPNPVLL 606 H+ VTSL F L SAD+ G V+ WR R DS + S Y +D+ +DT I I +L++ + LRL D+ K+ ++ +N +FSP G + AGG++GT+++W+ D LG AT+ F ++H + P ++++A + +G P+L+ Sbjct: 386 HKGYVTSLCFASNHHSLYSADSVGIVIEWR-RGEDSHHLW---SFSREYKWIDL-----KDTIINQIVLHKRERRLLIHARDSTLRLVDL--KTGCTLQWLQGETNNRFRTICSFSPCGTYIFAGGENGTVSVWNAD-----LGDLIATYEP----FNKQRVTIHCVQFHPHDNILAISHYGHNVPILI 554 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84843.19771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84843.19771.1 >prot_M-pyrifera_M_contig84843.19771.1 ID=prot_M-pyrifera_M_contig84843.19771.1|Name=mRNA_M-pyrifera_M_contig84843.19771.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=225bp GFASALGASGGGMGRAHRSAVTSLRFEDGGLRLASADAAGHVVVWRWRWRback to top mRNA from alignment at M-pyrifera_M_contig84843:195..869+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84843.19771.1 ID=mRNA_M-pyrifera_M_contig84843.19771.1|Name=mRNA_M-pyrifera_M_contig84843.19771.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=675bp|location=Sequence derived from alignment at M-pyrifera_M_contig84843:195..869+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84843:195..869+ >mRNA_M-pyrifera_M_contig84843.19771.1 ID=mRNA_M-pyrifera_M_contig84843.19771.1|Name=mRNA_M-pyrifera_M_contig84843.19771.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1350bp|location=Sequence derived from alignment at M-pyrifera_M_contig84843:195..869+ (Macrocystis pyrifera P11B4 male)back to top |