prot_M-pyrifera_M_contig84506.19706.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig84506.19706.1
Unique Nameprot_M-pyrifera_M_contig84506.19706.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length121
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84506.19706.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..41
e-value: 0.41
score: 19.5
coord: 47..87
e-value: 1.1
score: 16.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 55..86
e-value: 0.014
score: 16.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..121
e-value: 1.2E-16
score: 62.8
IPR040132TREX component Tex1/THOC3PANTHERPTHR22839THO COMPLEX SUBUNIT 3 THO3coord: 8..48
coord: 49..119
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 10..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84506contigM-pyrifera_M_contig84506:9..371 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84506.19706.1mRNA_M-pyrifera_M_contig84506.19706.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig84506 9..383 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig84506.19706.1 ID=prot_M-pyrifera_M_contig84506.19706.1|Name=mRNA_M-pyrifera_M_contig84506.19706.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
MERDVLHIPTTAQSILDLHWHPHHPSLLAIAGEDKHVHLLDTTTKSDIRL
HDVNHGHHFAVSTVAWSSDGHYLASTDRIRPTILLWSYPNPTSTPPIVLH
APHVRIFSSLCWHPTQPRLAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040132Tex1/THOC3
IPR036322WD40_repeat_dom_sf