mRNA_M-pyrifera_M_contig109400.1969.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109400.1969.1 vs. uniprot
Match: A0A7S1CQ04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ04_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.320e-26 Identity = 52/114 (45.61%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 13 CSDTRMSLGPSGTGLPFHLHQEVCSNMVIWGRKRWFLSRKSPP-----FNPKHNVGKWVVEVLPYLERGKVGDPSATAQRDDIL-ECTLQPGEMMYVPPDWYHSTLNVGHTIAM 336
CS +++G S +GLPFH H V N V++GRKRWFLSR +P FN K +W +E LP + + A +D L ECTL+PGE+M+VP WYH+TLN+G T+A+
Sbjct: 208 CSLKHVAIGHSRSGLPFHNHDAVAGNEVVFGRKRWFLSRDAPGGPGVGFNVKATSLQWALETLPRVPPTLLASQETEANEEDRLYECTLRPGEVMFVPAGWYHATLNIGETVAV 321
BLAST of mRNA_M-pyrifera_M_contig109400.1969.1 vs. uniprot
Match: L1ITG3_GUITC (JmjC domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ITG3_GUITC) HSP 1 Score: 89.4 bits (220), Expect = 7.550e-20 Identity = 42/110 (38.18%), Postives = 64/110 (58.18%), Query Frame = 1
Query: 16 SDTRMSLGPSGTGLPFHLHQEVCSNMVIWGRKRWFLSRKS--PPFNPKHNVGKWVVEVLPYLERGKVGDPSATAQRDDILECTLQPGEMMYVPPDWYHSTLNVGHTIAMA 339
S +G SG+G+PFH+H S V+WGRKRWFL K P F+P W+ + + + G D+LECT++PGE++Y P +W+H+TLN+G ++ M+
Sbjct: 99 SSLSFGIGGSGSGVPFHVHGPGFSE-VLWGRKRWFLMPKGVQPDFDPDETTLVWLRTRYNSMLQAEGGH--------DLLECTIEPGELLYFPDNWFHATLNIGQSVFMS 199
BLAST of mRNA_M-pyrifera_M_contig109400.1969.1 vs. uniprot
Match: A0A7S4NQ06_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NQ06_GUITH) HSP 1 Score: 89.4 bits (220), Expect = 3.510e-19 Identity = 42/110 (38.18%), Postives = 64/110 (58.18%), Query Frame = 1
Query: 16 SDTRMSLGPSGTGLPFHLHQEVCSNMVIWGRKRWFLSRKS--PPFNPKHNVGKWVVEVLPYLERGKVGDPSATAQRDDILECTLQPGEMMYVPPDWYHSTLNVGHTIAMA 339
S +G SG+G+PFH+H S V+WGRKRWFL K P F+P W+ + + + G D+LECT++PGE++Y P +W+H+TLN+G ++ M+
Sbjct: 183 SSLSFGIGGSGSGVPFHVHGPGFSE-VLWGRKRWFLMPKGVQPDFDPDETTLVWLRTRYNSMLQAEGGH--------DLLECTIEPGELLYFPDNWFHATLNIGQSVFMS 283
BLAST of mRNA_M-pyrifera_M_contig109400.1969.1 vs. uniprot
Match: A0A7S0JV43_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JV43_CAFRO) HSP 1 Score: 89.0 bits (219), Expect = 2.390e-18 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 1
Query: 10 QCSDTRMSLGPSGTGLPFHLHQEVCSNMVIWGRKRWFLSRKSPP--FNPKHNVGKWVVEVLPYLER------GKVGDPSAT-------AQRDDILECTLQPGEMMYVPPDWYHSTLN 315
QC+ + GP+ +GLP+H H+ V +N+++ GRKRW L R PP FNP+ +W LP L R VGD ++ D + C +PGE +YVP WYH+TLN
Sbjct: 188 QCAPAIVGAGPTWSGLPWHFHETVEANLLLAGRKRWGLRRTPPPGGFNPRRPAWEWFERWLPGLLRDNKTALASVGDAASADAGGPEGGAADPLFVCEQRPGEAIYVPDGWYHTTLN 304
BLAST of mRNA_M-pyrifera_M_contig109400.1969.1 vs. uniprot
Match: A0A5A8C568_CAFRO (JmjC domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C568_CAFRO) HSP 1 Score: 89.0 bits (219), Expect = 2.680e-18 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 1
Query: 10 QCSDTRMSLGPSGTGLPFHLHQEVCSNMVIWGRKRWFLSRKSPP--FNPKHNVGKWVVEVLPYLER------GKVGDPSAT-------AQRDDILECTLQPGEMMYVPPDWYHSTLN 315
QC+ + GP+ +GLP+H H+ V +N+++ GRKRW L R PP FNP+ +W LP L R VGD ++ D + C +PGE +YVP WYH+TLN
Sbjct: 170 QCAPAIVGAGPTWSGLPWHFHETVEANLLLAGRKRWGLRRTPPPGGFNPRRPAWEWFERWLPGLLRDNKTALASVGDAASADAGGPEGGAADPLFVCEQRPGEAIYVPDGWYHTTLN 286
BLAST of mRNA_M-pyrifera_M_contig109400.1969.1 vs. uniprot
Match: A0A0S4JMT2_BODSA (JmjC domain-containing protein n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JMT2_BODSA) HSP 1 Score: 86.3 bits (212), Expect = 8.550e-18 Identity = 45/118 (38.14%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 10 QCSDTRMSLGPSGTGLPFHLHQEVCSNMVIWGRKRWFLSRK--------SPPFNPKHNVGKWVVEVLPYLERGKVGDPSATAQRDDILECTLQPGEMMYVPPDWYHSTLNVGHTIAMA 339
Q S LGP+G+G+PFH H V N VI+G+KRW+L P F+P + +W+ V P + A+ D + EC PGE +Y+P W+HSTLN+G T+ MA
Sbjct: 218 QYSSLSFGLGPAGSGVPFHTHGHVF-NEVIYGKKRWWLQAPVFPLVDDIGPRFDPDASSLQWLEYVRPTY---------SPAETDALHECVCAPGETLYIPSFWHHSTLNIGETVFMA 325
BLAST of mRNA_M-pyrifera_M_contig109400.1969.1 vs. uniprot
Match: UPI001F076BA0 (jmjC domain-containing protein 8 isoform X1 n=3 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F076BA0) HSP 1 Score: 84.3 bits (207), Expect = 3.370e-17 Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query: 37 GPSGTGLPFHLHQEVCSNMVIWGRKRWFL--SRKSPPFNPKHNVGKWVVEVLPYLERGKVGDPSATAQRDDILECTLQPGEMMYVPPDWYHSTLNVGHTI 330
GP GTG+PFH H S VI+GRKRWFL K+P F+P H WV +V P+L + + L+CT+QPGE++Y P W+H+TLN+ ++
Sbjct: 210 GP-GTGVPFHWHGPGYSE-VIYGRKRWFLYPPDKAPHFHPNHTTLSWVRDVSPHLP-----------EEERPLQCTIQPGEVLYFPDRWWHATLNLDTSV 296
BLAST of mRNA_M-pyrifera_M_contig109400.1969.1 vs. uniprot
Match: A0A7I8VA03_9ANNE (DgyrCDS1296 n=2 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VA03_9ANNE) HSP 1 Score: 82.4 bits (202), Expect = 1.190e-16 Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 1
Query: 28 MSLGPSG--TGLPFHLHQEVCSNMVIWGRKRWFL--SRKSPPFNPKHNVGKWVVEVLPYLERGKVGDPSATAQRDDILECTLQPGEMMYVPPDWYHSTLNVGHTI 330
+S G +G TG+PFH+H + I+GRKRWFL SP FNP W++E P LE + + LECTL+PGE++++P W+H+TLN+ + +
Sbjct: 173 LSFGVAGALTGVPFHIHGPTFAE-TIYGRKRWFLYPPSASPQFNPDSTTLLWILESYPKLE-----------EAEKPLECTLKPGEILFIPDRWWHATLNLDNAV 265
BLAST of mRNA_M-pyrifera_M_contig109400.1969.1 vs. uniprot
Match: UPI00193A78F9 (jmjC domain-containing protein 8-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A78F9) HSP 1 Score: 80.5 bits (197), Expect = 7.940e-16 Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 1
Query: 1 VKEQCSDTRMSLGPSGTGLPFHLHQEVCSNMVIWGRKRWFLS--RKSPPFNPKHNVGKWVVEVLPYLERGKVGDPSATAQRDDILECTLQPGEMMYVPPDWYHSTLNVGHTIAMA 339
+ E+ + +GTG+PFH H S VI G KRWFL K P F+P N+ +WV++ P L + + LECT++PG+++Y P W+HSTLN+ ++ M+
Sbjct: 184 LPEKTGAYSFGIAAAGTGVPFHFHGPGFSE-VIHGSKRWFLYPYEKMPKFDPDQNMLRWVLDEYPKLTKD-----------NKPLECTIKPGDVLYFPDRWWHSTLNLKTSVFMS 286
BLAST of mRNA_M-pyrifera_M_contig109400.1969.1 vs. uniprot
Match: A0A8B7RT20_HIPAR (jmjC domain-containing protein 8 isoform X1 n=1 Tax=Hipposideros armiger TaxID=186990 RepID=A0A8B7RT20_HIPAR) HSP 1 Score: 80.5 bits (197), Expect = 1.100e-15 Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 1
Query: 43 SGTGLPFHLHQEVCSNMVIWGRKRWFL--SRKSPPFNPKHNVGKWVVEVLPYLERGKVGDPSATAQRDDILECTLQPGEMMYVPPDWYHSTLNVGHTI 330
+GTG+PFH H S VI+GRKRWFL K+P F+P W+ ++ P L PSA LECT+QPGE++Y P W+H+TLN+ ++
Sbjct: 229 AGTGVPFHWHGPGFSE-VIYGRKRWFLYPPEKTPKFHPNKTTLSWLRDMYPALT------PSAQP-----LECTIQPGEVLYFPDRWWHATLNLDTSV 314 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109400.1969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109400.1969.1 >prot_M-pyrifera_M_contig109400.1969.1 ID=prot_M-pyrifera_M_contig109400.1969.1|Name=mRNA_M-pyrifera_M_contig109400.1969.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp MSLGPSGTGLPFHLHQEVCSNMVIWGRKRWFLSRKSPPFNPKHNVGKWVVback to top mRNA from alignment at M-pyrifera_M_contig109400:223..561+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109400.1969.1 ID=mRNA_M-pyrifera_M_contig109400.1969.1|Name=mRNA_M-pyrifera_M_contig109400.1969.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=339bp|location=Sequence derived from alignment at M-pyrifera_M_contig109400:223..561+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109400:223..561+ >mRNA_M-pyrifera_M_contig109400.1969.1 ID=mRNA_M-pyrifera_M_contig109400.1969.1|Name=mRNA_M-pyrifera_M_contig109400.1969.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig109400:223..561+ (Macrocystis pyrifera P11B4 male)back to top |