mRNA_M-pyrifera_M_contig109387.1959.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109387.1959.1 vs. uniprot
Match: A0A7K1Z9C7_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z9C7_9ACTN) HSP 1 Score: 214 bits (545), Expect = 8.740e-69 Identity = 107/145 (73.79%), Postives = 120/145 (82.76%), Query Frame = 1
Query: 4 ANRPGEVIGNVQPSGPAVGNQGPDQGYVLTLAARIKDELVLAPGEHAADAITGACAVALRRASLYGRAPMIGDLRLALSLFGFLSPAPDDLVAWRRPHFDEVHHSTIHYFAAREIADLVPEATLRMMPDEVAAASAADWKTPLGL 438
ANRPGEV+G QPSGPAVGNQGPDQGYV LA R + ELVLAPGEHA+D + GACAVALRRASLYGRAP+ DLR+AL++FGFL A D+LV +RRP F+E+HH HYF AREIADLVPEATLRM P EVAAA A DW+ PLGL
Sbjct: 29 ANRPGEVVGGAQPSGPAVGNQGPDQGYVHKLAKRFESELVLAPGEHASDVLEGACAVALRRASLYGRAPVADDLRVALTVFGFLGSAVDELVEFRRPLFEELHHVAFHYFTAREIADLVPEATLRMGPTEVAAACAEDWRVPLGL 173
BLAST of mRNA_M-pyrifera_M_contig109387.1959.1 vs. uniprot
Match: A0A538CY33_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538CY33_9ACTN) HSP 1 Score: 156 bits (394), Expect = 7.300e-46 Identity = 88/143 (61.54%), Postives = 105/143 (73.43%), Query Frame = 1
Query: 10 RPGEVIGNVQPSGPAVGNQGPDQGYVLTLAARIKDELVLAPGEHAADAITGACAVALRRASLYGRAPMIGDLRLALSLFGFL-SPAPDDLVAWRRPHFDEVHHSTIHYFAAREIADLVPEATLRMMPDEVAAASAADWKTPLG 435
RPG++ G QPSGP G QGPDQGY LTLA R++D+LVLA GE A + I G VALRRA+L+GRAP+I DLRLA LFGFL + AP DL+A+RRP F EV S+ HY ARE+A LVPE LR PDEV AA +DW++ LG
Sbjct: 32 RPGDLQGRGQPSGPGFGVQGPDQGYALTLARRLRDQLVLADGESADEVIAGCLGVALRRAALFGRAPVIDDLRLAFHLFGFLDNEAPADLIAFRRPLFAEVD-SSHHYAEARELATLVPEEALRQTPDEV-AARRSDWRSLLG 172
BLAST of mRNA_M-pyrifera_M_contig109387.1959.1 vs. uniprot
Match: A0A6J7I912_9ZZZZ (Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A6J7I912_9ZZZZ) HSP 1 Score: 151 bits (382), Expect = 4.400e-44 Identity = 88/145 (60.69%), Postives = 102/145 (70.34%), Query Frame = 1
Query: 4 ANRPGEVIGNVQPSGPAVGNQGPDQGYVLTLAARIKDELVLAPGEHAADAITGACAVALRRASLYGRAPMIGDLRLALSLFGFLSP-APDDLVAWRRPHFDEVHHSTIHYFAAREIADLVPEATLRMMPDEVAAASAADWKTPLG 435
A+RP EV+ QP+G A G QGPDQGY L LA + +L LAPGEH DAI G VA+RRASLYGRAPM+ DL+LA SLFGFL AP DLVA+R P F EV + HYF R IA LVPEATLR+ P+ VAAA+ DW+ LG
Sbjct: 29 ASRPAEVVEGGQPAGDAFGFQGPDQGYALKLANSFRGKLHLAPGEHEEDAIAGCLVVAMRRASLYGRAPMMPDLKLAFSLFGFLDEGAPADLVAFRTPLFVEVSNPH-HYFEGRHIASLVPEATLRLTPEVVAAAT--DWRALLG 170
BLAST of mRNA_M-pyrifera_M_contig109387.1959.1 vs. uniprot
Match: A0A2D7RXE4_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RXE4_9ACTN) HSP 1 Score: 150 bits (379), Expect = 1.460e-43 Identity = 81/144 (56.25%), Postives = 93/144 (64.58%), Query Frame = 1
Query: 1 RANRPGEVIGNVQPSGPAVGNQGPDQGYVLTLAARIKDELVLAPGEHAADAITGACAVALRRASLYGRAPMIGDLRLALSLFGFLSPAPDDLVAWRRPHFDEVHHSTIHYFAAREIADLVPEATLRMMPDEVAAASAADWKTPL 432
RA RPGE IG P+G A+GNQGPDQGY + LA +L+LAPGEHAADA+ GA AV LRRAS++GRAP+ D L L +GFL AP L R F EVHH+TIHYF+AREIAD V LR A ADWK L
Sbjct: 28 RAERPGETIGAPHPTGGALGNQGPDQGYAIKLAKAFAGDLILAPGEHAADALXGAVAVGLRRASMFGRAPVRDDXELGLLAYGFLGEAPAALXXXRXALFSEVHHTTIHYFSAREIADRVDGEWLRQPIASARVALQADWKAAL 171
BLAST of mRNA_M-pyrifera_M_contig109387.1959.1 vs. uniprot
Match: A0A6B0WNX7_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WNX7_9ACTN) HSP 1 Score: 150 bits (378), Expect = 2.550e-43 Identity = 82/146 (56.16%), Postives = 97/146 (66.44%), Query Frame = 1
Query: 4 ANRPGEVIGNVQPSGPAVGNQGPDQGYVLTLAARIKDELVLAPGEHAADAITGACAVALRRASLYGRAPMIGDLRLALSLFGFLSPAPDDLVAWRRPHFDEV--HHSTIHYFAAREIADLVPEATLRMMPDEVAAASAADWKTPLG 435
A+RPGEV+G +GP +GNQGPDQGY L LA R +LVL PGE DA+ G AVAL RAS++GRAP++ DLRLAL LFGFL A +LVAWRR F HH Y +ADLVP TLR+ P VA A + DW+TPLG
Sbjct: 29 ADRPGEVVGAEPVAGPGLGNQGPDQGYALKLAERFAGKLVLTPGEREDDALAGCVAVALSRASMFGRAPVMHDLRLALELFGFLDEADAELVAWRRDRFAGAAGHHG---YHVKLRLADLVPSDTLRLTPAAVAEARSKDWRTPLG 171
BLAST of mRNA_M-pyrifera_M_contig109387.1959.1 vs. uniprot
Match: A0A7K2A3L4_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A3L4_9ACTN) HSP 1 Score: 149 bits (377), Expect = 2.600e-43 Identity = 81/147 (55.10%), Postives = 97/147 (65.99%), Query Frame = 1
Query: 4 ANRPGEVIGNVQPSGPAVGNQGPDQGYVLTLAARIKDELVLAPGEHAADAITGACAVALRRASLYGRAPMIGDLRLALSLFGFLSPAPDDLVAWRRPHFDEV--HHSTIHYFAAREIADLVPEATLRMMPDEVAAASAADWKTPLGL 438
A+RPGEV+G +GP +GNQGPDQGY L LA R +LVLA GE DA+ G AVALRRAS++GRAP++ DLRLAL LFGFL A +LVAWRR F HH Y +ADL+P TLR+ P A A +W+TPLGL
Sbjct: 29 ADRPGEVVGGELTAGPGLGNQGPDQGYALKLAERFAGQLVLAAGEREDDALAGCVAVALRRASMFGRAPVVHDLRLALELFGFLDEADAELVAWRRDQFAGAAGHHG---YHVKLRLADLIPSDTLRLTPAAAAEARTDNWRTPLGL 172
BLAST of mRNA_M-pyrifera_M_contig109387.1959.1 vs. uniprot
Match: A0A6N9ERY2_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9ERY2_9ACTN) HSP 1 Score: 149 bits (376), Expect = 3.690e-43 Identity = 82/147 (55.78%), Postives = 97/147 (65.99%), Query Frame = 1
Query: 4 ANRPGEVIGNVQPSGPAVGNQGPDQGYVLTLAARIKDELVLAPGEHAADAITGACAVALRRASLYGRAPMIGDLRLALSLFGFLSPAPDDLVAWRRPHFDEV--HHSTIHYFAAREIADLVPEATLRMMPDEVAAASAADWKTPLGL 438
A+RPGEV+G+ P+GP +G QGPDQGY L LA R LVLA GE DA+ G CAVALRRASL+GRAP++ DLRLAL LFGFL A LV WRR F HH Y +ADL+P TLR+ P VA A + +W+ PLGL
Sbjct: 29 ADRPGEVVGDEAPAGPGLGCQGPDQGYALKLAQRFAGRLVLADGEREDDALAGCCAVALRRASLFGRAPVMHDLRLALELFGFLIDADAALVTWRRARFAGAAGHHG---YHVKLRLADLIPADTLRLTPAAVAEACSENWRVPLGL 172
BLAST of mRNA_M-pyrifera_M_contig109387.1959.1 vs. uniprot
Match: A0A7K1YU37_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1YU37_9ACTN) HSP 1 Score: 147 bits (372), Expect = 1.490e-42 Identity = 81/147 (55.10%), Postives = 98/147 (66.67%), Query Frame = 1
Query: 4 ANRPGEVIGNVQPSGPAVGNQGPDQGYVLTLAARIKDELVLAPGEHAADAITGACAVALRRASLYGRAPMIGDLRLALSLFGFLSPAPDDLVAWRRPHFDEV--HHSTIHYFAAREIADLVPEATLRMMPDEVAAASAADWKTPLGL 438
A+RPGEV+G +GP +GNQGPDQGY L LA RI +LVLAPGE +A+ G +VALRRAS++GRAP++ DLRLAL LFGFL A +LVAWRR F HH Y +ADLVP TLR+ P A A +W+ PLGL
Sbjct: 29 ADRPGEVVGIEPSAGPGLGNQGPDQGYALKLAERIVGQLVLAPGEREDNALAGCVSVALRRASMFGRAPVMHDLRLALELFGFLGEADAELVAWRRDRFAGAAGHHG---YHVNMRLADLVPTETLRLTPAAAAEARTDNWRAPLGL 172
BLAST of mRNA_M-pyrifera_M_contig109387.1959.1 vs. uniprot
Match: A0A6B0ZCP6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZCP6_9ACTN) HSP 1 Score: 147 bits (370), Expect = 2.990e-42 Identity = 82/147 (55.78%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 4 ANRPGEVIGNVQPSGPAVGNQGPDQGYVLTLAARIKDELVLAPGEHAADAITGACAVALRRASLYGRAPMIGDLRLALSLFGFLSPAPDDLVAWRRPHFDEV--HHSTIHYFAAREIADLVPEATLRMMPDEVAAASAADWKTPLGL 438
A+RPGEV+G +GP +GNQGPDQGY L LA R+ LVL GE DA+ G AVALRRAS++GRAP++ DLRLAL LFGFL A +LVAWRR F HH Y +A LVPE TLR P VA A DW+ PLGL
Sbjct: 29 ADRPGEVVGTEPVAGPGLGNQGPDQGYALKLAERLAGRLVLTAGEREDDALAGCVAVALRRASMFGRAPVMHDLRLALELFGFLGEADAELVAWRRDQFAGAAGHHG---YHVKLRLAALVPEETLRRTPAAVAGLHANDWRDPLGL 172
BLAST of mRNA_M-pyrifera_M_contig109387.1959.1 vs. uniprot
Match: A0A7Y2GKK6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKK6_9ACTN) HSP 1 Score: 147 bits (370), Expect = 3.180e-42 Identity = 75/145 (51.72%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 4 ANRPGEVIGNVQPSGPAVGNQGPDQGYVLTLAARIKDELVLAPGEHAADAITGACAVALRRASLYGRAPMIGDLRLALSLFGFLSPAPD-DLVAWRRPHFDEVHHSTIHYFAAREIADLVPEATLRMMPDEVAAASAADWKTPLG 435
A RPG+++G P G VG QGPDQG+V L + D L L GEH AD + G CAVALRRAS++GRAP+ DL LA ++FGF APD +LV+WRR F E+ H+ HY R++A VPEATLR+ P A A A+W+T +G
Sbjct: 29 ATRPGDLVGEDMPVGGGVGFQGPDQGFVRRLVPQFIDRLQLTDGEHRADVVEGCCAVALRRASIFGRAPVNHDLELAFTMFGFFDVAPDPELVSWRRERFAELSHTVQHYVEGRQLAGSVPEATLRLTPTAAAEAYRANWRTTVG 173 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109387.1959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109387.1959.1 >prot_M-pyrifera_M_contig109387.1959.1 ID=prot_M-pyrifera_M_contig109387.1959.1|Name=mRNA_M-pyrifera_M_contig109387.1959.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp RANRPGEVIGNVQPSGPAVGNQGPDQGYVLTLAARIKDELVLAPGEHAADback to top mRNA from alignment at M-pyrifera_M_contig109387:165..605- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109387.1959.1 ID=mRNA_M-pyrifera_M_contig109387.1959.1|Name=mRNA_M-pyrifera_M_contig109387.1959.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=441bp|location=Sequence derived from alignment at M-pyrifera_M_contig109387:165..605- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109387:165..605- >mRNA_M-pyrifera_M_contig109387.1959.1 ID=mRNA_M-pyrifera_M_contig109387.1959.1|Name=mRNA_M-pyrifera_M_contig109387.1959.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig109387:165..605- (Macrocystis pyrifera P11B4 male)back to top |