mRNA_M-pyrifera_M_contig109379.1956.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109379.1956.1 vs. uniprot
Match: A0A1V9YTD5_9STRA (Transmembrane protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTD5_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 9.790e-11 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 1 LTPGAEYVLRIEARDPRFPGQFGNGSALVSMLANAPPRPGTLSIQPKVGTALSTEFKVTTSGWIDEQIPLQF 216
LTPG Y+ R+ A D G G G+ V++ NAPP PG++SI P GTA++ F +T +GW DE +PL +
Sbjct: 1153 LTPGKTYIFRLTALDSN--GYSGYGT--VTIAVNAPPTPGSISIAPTQGTAITDLFTITCAGWTDENLPLSY 1220
BLAST of mRNA_M-pyrifera_M_contig109379.1956.1 vs. uniprot
Match: A0A067BWW2_SAPPC (GPS domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BWW2_SAPPC) HSP 1 Score: 61.6 bits (148), Expect = 2.230e-9 Identity = 31/72 (43.06%), Postives = 40/72 (55.56%), Query Frame = 1
Query: 1 LTPGAEYVLRIEARDPRFPGQFGNGSALVSMLANAPPRPGTLSIQPKVGTALSTEFKVTTSGWIDEQIPLQF 216
LTPG YV R+ A D FG +S+ N PP PG++SI P GTA+S F VT + W D +PL +
Sbjct: 1008 LTPGKTYVFRLTALDSTGSAGFGT----ISITVNTPPTPGSMSILPAQGTAISDLFTVTCADWTDANLPLTY 1075
BLAST of mRNA_M-pyrifera_M_contig109379.1956.1 vs. uniprot
Match: T0PSS4_SAPDV (REJ domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PSS4_SAPDV) HSP 1 Score: 59.3 bits (142), Expect = 1.460e-8 Identity = 30/72 (41.67%), Postives = 39/72 (54.17%), Query Frame = 1
Query: 1 LTPGAEYVLRIEARDPRFPGQFGNGSALVSMLANAPPRPGTLSIQPKVGTALSTEFKVTTSGWIDEQIPLQF 216
LTPG YV R+ A D FG +S+ N+PP PG++SI P G A+S F VT W D +PL +
Sbjct: 3984 LTPGKTYVFRLTALDSTGSAGFGT----ISITVNSPPTPGSMSILPAQGMAISDLFTVTCGDWTDANLPLTY 4051
BLAST of mRNA_M-pyrifera_M_contig109379.1956.1 vs. uniprot
Match: A0A8B7ZCQ2_ACAPL (polycystin-1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZCQ2_ACAPL) HSP 1 Score: 58.5 bits (140), Expect = 2.710e-8 Identity = 29/66 (43.94%), Postives = 36/66 (54.55%), Query Frame = 1
Query: 1 LTPGAEYVLRIEARDPRFPGQFGNGSALVSMLANAPPRPGTLSIQPKVGTALSTEFKVTTSGWIDE 198
L G EY LR++ +D GNG S L N PP G I P VG A++TEF + SGW+DE
Sbjct: 1308 LDAGREYYLRLDVKDVLL----GNGFTQYSFLTNLPPYNGACQINPSVGFAVTTEFSINCSGWLDE 1369
BLAST of mRNA_M-pyrifera_M_contig109379.1956.1 vs. uniprot
Match: A0A7S3DK46_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DK46_9EUKA) HSP 1 Score: 58.2 bits (139), Expect = 3.640e-8 Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 1
Query: 1 LTPGAEYVLRIEARDPRFPGQFGN-GSALVSMLANAPPRPGTLSIQPKVGTALSTEFKVTTSGWIDEQ 201
PG V IE R GQ GN SA ++ N PP PG S+QP VGTALST F V GW+DE+
Sbjct: 384 FQPGQRVV--IECRGYAKAGQTGNFSSASAEVVGNVPPLPGLTSVQPGVGTALSTTFGVNLFGWVDEE 449
BLAST of mRNA_M-pyrifera_M_contig109379.1956.1 vs. uniprot
Match: UPI0014559276 (uncharacterized protein LOC117293120 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014559276) HSP 1 Score: 55.1 bits (131), Expect = 4.540e-7 Identity = 28/66 (42.42%), Postives = 36/66 (54.55%), Query Frame = 1
Query: 1 LTPGAEYVLRIEARDPRFPGQFGNGSALVSMLANAPPRPGTLSIQPKVGTALSTEFKVTTSGWIDE 198
L G EY+L++ D G G S + N PP G+ SI P G A+STEF +T SGW+DE
Sbjct: 2099 LEGGREYMLQLNVSDQTH----GRGFIQHSFITNLPPYDGSCSITPTTGYAISTEFSITCSGWLDE 2160
BLAST of mRNA_M-pyrifera_M_contig109379.1956.1 vs. uniprot
Match: A0A7S3LW85_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LW85_9EUKA) HSP 1 Score: 52.4 bits (124), Expect = 4.020e-6 Identity = 27/74 (36.49%), Postives = 41/74 (55.41%), Query Frame = 1
Query: 1 LTPGAEYVLRIEARDPRFPGQFGNGSALVSMLANAPPRPGTLSIQPKVGTALSTEFKVTTSGWIDE--QIPLQF 216
LTPG Y EA P F +G A VS++ N+ P G++S+ P +G A++T F+V W D+ PL++
Sbjct: 99 LTPGTTYRFMAEAYHPAFEE---SGVAAVSVVVNSAPSSGSISVDPPIGRAMNTSFRVICEDWADDLDDTPLKY 169
BLAST of mRNA_M-pyrifera_M_contig109379.1956.1 vs. uniprot
Match: UPI0018D7794E (polycystin-1-like n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7794E) HSP 1 Score: 52.4 bits (124), Expect = 4.060e-6 Identity = 27/66 (40.91%), Postives = 36/66 (54.55%), Query Frame = 1
Query: 1 LTPGAEYVLRIEARDPRFPGQFGNGSALVSMLANAPPRPGTLSIQPKVGTALSTEFKVTTSGWIDE 198
L G EY LR++ +D GNG S L N PP G+ I P G A++TEF V +GW++E
Sbjct: 1784 LDAGNEYNLRLDVKD----ALLGNGFLQHSFLTNLPPYNGSCQITPSEGYAVTTEFSVNCTGWLEE 1845
BLAST of mRNA_M-pyrifera_M_contig109379.1956.1 vs. uniprot
Match: UPI0009E62BFB (uncharacterized protein LOC110048087 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E62BFB) HSP 1 Score: 49.7 bits (117), Expect = 3.640e-5 Identity = 21/56 (37.50%), Postives = 35/56 (62.50%), Query Frame = 1
Query: 49 RFPGQFGNGSALVSMLANAPPRPGTLSIQPKVGTALSTEFKVTTSGWIDEQIPLQF 216
R GQ+G + + + N+PP GT ++PK+G+A++T F++ SGW D PL +
Sbjct: 1312 RLNGQYGE--YIHTFVTNSPPENGTCEVEPKIGSAMNTSFRINCSGWQDPDQPLTY 1365 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109379.1956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109379.1956.1 >prot_M-pyrifera_M_contig109379.1956.1 ID=prot_M-pyrifera_M_contig109379.1956.1|Name=mRNA_M-pyrifera_M_contig109379.1956.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=72bp LTPGAEYVLRIEARDPRFPGQFGNGSALVSMLANAPPRPGTLSIQPKVGTback to top mRNA from alignment at M-pyrifera_M_contig109379:9..224- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109379.1956.1 ID=mRNA_M-pyrifera_M_contig109379.1956.1|Name=mRNA_M-pyrifera_M_contig109379.1956.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=216bp|location=Sequence derived from alignment at M-pyrifera_M_contig109379:9..224- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109379:9..224- >mRNA_M-pyrifera_M_contig109379.1956.1 ID=mRNA_M-pyrifera_M_contig109379.1956.1|Name=mRNA_M-pyrifera_M_contig109379.1956.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig109379:9..224- (Macrocystis pyrifera P11B4 male)back to top |