mRNA_M-pyrifera_M_contig83703.19548.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83703.19548.1
Unique NamemRNA_M-pyrifera_M_contig83703.19548.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A2E8L9B1_9ACTN (DNA-directed RNA polymerase (Fragment) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L9B1_9ACTN)

HSP 1 Score: 568 bits (1464), Expect = 4.770e-200
Identity = 280/296 (94.59%), Postives = 292/296 (98.65%), Query Frame = 1 
Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 888
            PPPK++VEECKEKDM+Y+APIFVRARFMN+NTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGT+HPYRGEWIE DVEQKPGKDVTAGARVARKRR+SLFTLLRALGYDEENEPGFLDRFV++FDFLEGQWEKD+EIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFL +QF LDLERP+ DQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   73 PPPKYTVEECKEKDMSYTAPIFVRARFMNANTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTIHPYRGEWIEMDVEQKPGKDVTAGARVARKRRLSLFTLLRALGYDEENEPGFLDRFVQHFDFLEGQWEKDREIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLTEQFGLDLERPEEDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 368
[Close]
BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A2D6U8F6_9ACTN (DNA-directed RNA polymerase subunit beta n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U8F6_9ACTN)

HSP 1 Score: 572 bits (1473), Expect = 2.930e-193
Identity = 283/296 (95.61%), Postives = 292/296 (98.65%), Query Frame = 1 
Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 888
            PPPK++VEECKEKDMTYSAPIFVRARFMN+NTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGT+HPYRGEWIE DVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFV++FDFLEGQWEKD+EIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFL +QF LDLERP+ DQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   77 PPPKYTVEECKEKDMTYSAPIFVRARFMNANTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTIHPYRGEWIEMDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVQHFDFLEGQWEKDREIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLTEQFGLDLERPEQDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 372
[Close]
BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A354BBG9_9ACTN (DNA-directed RNA polymerase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354BBG9_9ACTN)

HSP 1 Score: 546 bits (1407), Expect = 1.870e-188
Identity = 271/283 (95.76%), Postives = 279/283 (98.59%), Query Frame = 1 
Query:   40 DMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 888
            DMTYSAPIFVRARFMN+NTGEIKEQTVFMGDFPMMTDKGTFIINGTER+VVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGT+HPYRGEWIE DVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFV++FDFLEGQWEKD+EIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFL +QF LDLERP+ DQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:    1 DMTYSAPIFVRARFMNANTGEIKEQTVFMGDFPMMTDKGTFIINGTERIVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTIHPYRGEWIEMDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVQHFDFLEGQWEKDREIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLTEQFGLDLERPEQDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 283
[Close]
BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A6B1AXS1_9ACTN (DNA-directed RNA polymerase subunit beta n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AXS1_9ACTN)

HSP 1 Score: 550 bits (1416), Expect = 7.940e-185
Identity = 271/296 (91.55%), Postives = 285/296 (96.28%), Query Frame = 1 
Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 888
            PPPKFSVEECKEKDMTYSAPIFVRARFMN+NTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGER+RLRN SKHQ+VTGT+HPYRGEWIEFDVEQKPGKD TAGARVARKRRISLFTLLRALGYDEENEPGFLDR VE+F  LEGQWEKDK+IAPT+EE+LLEIYKRARPGEP TVESAR+YFRNAFF+ RRYDLSRVGRYKLNRKLGPE++FL+KQF LDL+RPDPDQSVLAQAEMLAATTYLLNLA   PGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   74 PPPKFSVEECKEKDMTYSAPIFVRARFMNANTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERYRLRNRSKHQIVTGTIHPYRGEWIEFDVEQKPGKDTTAGARVARKRRISLFTLLRALGYDEENEPGFLDRLVEHFYLLEGQWEKDKDIAPTREESLLEIYKRARPGEPHTVESARSYFRNAFFDSRRYDLSRVGRYKLNRKLGPEIEFLEKQFNLDLQRPDPDQSVLAQAEMLAATTYLLNLAHATPGYRLDDQDHFANRRIRSVGELIQNQVRIG 369
[Close]
BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A2D7RZC4_9ACTN (DNA-directed RNA polymerase subunit beta n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RZC4_9ACTN)

HSP 1 Score: 548 bits (1413), Expect = 2.450e-184
Identity = 274/296 (92.57%), Postives = 283/296 (95.61%), Query Frame = 1 
Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 888
            PPPK++VEECKEKDM+Y+APIFVRARFMN+NTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVI  PGERFRLRNLSKHQLVTGT+ PYRGEWIE DVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPG LDRFV++FDFLEGQWEKD+EIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFL  Q  LDLERP  DQSVLAQAEM AATTYLLNLAKGEPGYRLD QDHFANRRIRSVGELIQNQVRIG
Sbjct:   77 PPPKYTVEECKEKDMSYTAPIFVRARFMNANTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIXXPGERFRLRNLSKHQLVTGTIXPYRGEWIEMDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGXLDRFVQHFDFLEGQWEKDREIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLTXQXGLDLERPXXDQSVLAQAEMXAATTYLLNLAKGEPGYRLDXQDHFANRRIRSVGELIQNQVRIG 372
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BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A3M2G8F7_ACTSX (DNA-directed RNA polymerase subunit beta n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G8F7_ACTSX)

HSP 1 Score: 543 bits (1398), Expect = 3.480e-182
Identity = 263/296 (88.85%), Postives = 286/296 (96.62%), Query Frame = 1 
Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 888
            P PKF+VEECKE+DMTY+APIFVRARFMN++TGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNL+KHQLVTGT+HPYRGEWIEFDVEQKPGKDVTAGARVARKRR+SLFT+LRALGYDEEN PGFL+R+VE+FDFL GQWEKD+E+APTQEE+L+EIYKRARPGEPPT+ESARAYFRNAFFE RRYDLSRVGRYKLNRKLGPELD+++  F +D+ERPDPDQ VL+ AEMLA TTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   70 PYPKFTVEECKEQDMTYAAPIFVRARFMNADTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLAKHQLVTGTIHPYRGEWIEFDVEQKPGKDVTAGARVARKRRLSLFTVLRALGYDEENAPGFLERYVEHFDFLAGQWEKDRELAPTQEESLIEIYKRARPGEPPTIESARAYFRNAFFEQRRYDLSRVGRYKLNRKLGPELDWIEATFGIDVERPDPDQQVLSPAEMLATTTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 365
[Close]
BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A7Y1XVS8_9ACTN (DNA-directed RNA polymerase subunit beta n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7Y1XVS8_9ACTN)

HSP 1 Score: 541 bits (1394), Expect = 1.590e-181
Identity = 263/296 (88.85%), Postives = 284/296 (95.95%), Query Frame = 1 
Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 888
            PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTD+GTF+INGTERVVVSQLVRSPGVIFQPGER+RLRNL+K+QLVTGT+HPYRGEWIEFDVEQKPGKDVTAG RVARKRR+SLF LLRALGYDEEN PGFLD+FV +FDFLEGQWEKD+E+APTQEEAL+EIYKRARPGEPP+ ESAR YFRNAFFE RRYDLSRVGRYKLNRKLGPE+D L+K FK+ LERPDPDQSVL+QAE+LA  +YLL+LAKG+PGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   73 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDRGTFVINGTERVVVSQLVRSPGVIFQPGERYRLRNLAKYQLVTGTIHPYRGEWIEFDVEQKPGKDVTAGTRVARKRRLSLFVLLRALGYDEENAPGFLDKFVNHFDFLEGQWEKDRELAPTQEEALIEIYKRARPGEPPSAESARNYFRNAFFESRRYDLSRVGRYKLNRKLGPEMDNLEKLFKIKLERPDPDQSVLSQAEVLATCSYLLHLAKGDPGYRLDDQDHFANRRIRSVGELIQNQVRIG 368
[Close]
BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A381WSY4_9ZZZZ (DNA-directed RNA polymerase (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381WSY4_9ZZZZ)

HSP 1 Score: 524 bits (1350), Expect = 3.410e-181
Identity = 253/296 (85.47%), Postives = 280/296 (94.59%), Query Frame = 1 
Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 888
            PPPKFSVEECKEKDMT+SAPIFVRA F N+NTGEIKEQTVFMGDFP+MT+KGTF+INGTERVVVSQLVRSPGVIFQPGER+RLRNL+KHQLVTGT+HPYRGEWIEFDVEQKPGKDVTAG RVARKRR+S+FTLLRALGYDEENEPGFLDRFV +FD+LEGQWEKDK+IAPTQEE+LLEIYKR RPGEP TVE+ARAY RNAFFE RRYDLSRVGRYKLNRKLGPE++ +++ F ++LERPDPD  VL ++E+LA  TYLL+LAKGEPGYRLDDQDHFANRRIRSVGELIQNQ+RIG
Sbjct:   73 PPPKFSVEECKEKDMTFSAPIFVRACFKNANTGEIKEQTVFMGDFPVMTEKGTFVINGTERVVVSQLVRSPGVIFQPGERYRLRNLAKHQLVTGTIHPYRGEWIEFDVEQKPGKDVTAGTRVARKRRLSMFTLLRALGYDEENEPGFLDRFVRHFDYLEGQWEKDKDIAPTQEESLLEIYKRVRPGEPATVEAARAYLRNAFFESRRYDLSRVGRYKLNRKLGPEIEKIEELFGIELERPDPDSQVLTRSEVLATCTYLLHLAKGEPGYRLDDQDHFANRRIRSVGELIQNQLRIG 368
[Close]
BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A7W0LSQ4_9ACTN (DNA-directed RNA polymerase (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0LSQ4_9ACTN)

HSP 1 Score: 509 bits (1311), Expect = 1.740e-179
Identity = 253/297 (85.19%), Postives = 274/297 (92.26%), Query Frame = 1 
Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKL-DLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 888
            PPPKFSVEECKEKDMT+SAPIFVRARFMN++TGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNL+KHQLVTGT+HPYRGEWIEFDVEQKPGKDVTAG RVARKRR+SLF LLRALGYDEE+ PGFL+R V +FDFLEGQWEKD+ +APTQEEAL+EIYKRARPGEPPT +++R YF NAFF  +RYDLSRVGRYKLNRKLGPEL  LQ+ F L DL+ PDPDQS L++ E+LAA TYLLNLA G  GYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   70 PPPKFSVEECKEKDMTFSAPIFVRARFMNASTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLAKHQLVTGTIHPYRGEWIEFDVEQKPGKDVTAGTRVARKRRLSLFILLRALGYDEEHHPGFLERLVRHFDFLEGQWEKDQGLAPTQEEALIEIYKRARPGEPPTPDASRNYFENAFFNGKRYDLSRVGRYKLNRKLGPELGKLQELFGLSDLDLPDPDQSTLSRCEVLAACTYLLNLADGVQGYRLDDQDHFANRRIRSVGELIQNQVRIG 366
[Close]
BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A6I3F3D3_9ACTN (DNA-directed RNA polymerase subunit beta n=10 Tax=root TaxID=1 RepID=A0A6I3F3D3_9ACTN)

HSP 1 Score: 536 bits (1380), Expect = 1.890e-179
Identity = 262/296 (88.51%), Postives = 283/296 (95.61%), Query Frame = 1 
Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 888
            PPPKF+VEECKEKDMT+SAPIFVRARFMN++TGEIKEQTVFMGDFPMMTDKGTF+INGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGT+HPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEEN PGFLDRFV +FDFLEGQW+KD+E++PTQ+EAL+EIYKRARPGEPP+V+SARAYFRNAFFE RRYDLSRVGRYKLNRKLGPELD L+K F + LERP+ DQSVL  AE+LA+T+YLLNL   EPGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   73 PPPKFTVEECKEKDMTFSAPIFVRARFMNASTGEIKEQTVFMGDFPMMTDKGTFVINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTIHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENYPGFLDRFVRHFDFLEGQWDKDREVSPTQDEALVEIYKRARPGEPPSVDSARAYFRNAFFENRRYDLSRVGRYKLNRKLGPELDKLEKLFNITLERPELDQSVLTPAEVLASTSYLLNLVNAEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 368
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8L9B1_9ACTN4.770e-20094.59DNA-directed RNA polymerase (Fragment) n=2 Tax=Aci... [more]
A0A2D6U8F6_9ACTN2.930e-19395.61DNA-directed RNA polymerase subunit beta n=6 Tax=A... [more]
A0A354BBG9_9ACTN1.870e-18895.76DNA-directed RNA polymerase (Fragment) n=1 Tax=Aci... [more]
A0A6B1AXS1_9ACTN7.940e-18591.55DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
A0A2D7RZC4_9ACTN2.450e-18492.57DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
A0A3M2G8F7_ACTSX3.480e-18288.85DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
A0A7Y1XVS8_9ACTN1.590e-18188.85DNA-directed RNA polymerase subunit beta n=2 Tax=A... [more]
A0A381WSY4_9ZZZZ3.410e-18185.47DNA-directed RNA polymerase (Fragment) n=1 Tax=mar... [more]
A0A7W0LSQ4_9ACTN1.740e-17985.19DNA-directed RNA polymerase (Fragment) n=1 Tax=Aci... [more]
A0A6I3F3D3_9ACTN1.890e-17988.51DNA-directed RNA polymerase subunit beta n=10 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83703contigM-pyrifera_M_contig83703:3..890 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score504.2
Seed ortholog evalue4.1e-140
Seed eggNOG ortholog1229780.BN381_350066
Preferred namerpoB
KEGG rclassRC02795
KEGG koko:K03043
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020
KEGG ModuleM00183
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0030880,GO:0032991,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0061695,GO:0071944,GO:1902494,GO:1990234
EggNOG free text desc.DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EggNOG OGs2GJ81@201174,3UWE7@52018,COG0085@1,COG0085@2
EC2.7.7.6
COG Functional cat.K
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Exons1
Model size888
Cds size888
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816745.023621-CDS-M-pyrifera_M_contig83703:2..8901622816745.023621-CDS-M-pyrifera_M_contig83703:2..890Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83703 3..890 -
1692278152.8816466-CDS-M-pyrifera_M_contig83703:2..8901692278152.8816466-CDS-M-pyrifera_M_contig83703:2..890Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83703 3..890 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83703.19548.1prot_M-pyrifera_M_contig83703.19548.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83703 3..890 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83703.19548.1

>prot_M-pyrifera_M_contig83703.19548.1 ID=prot_M-pyrifera_M_contig83703.19548.1|Name=mRNA_M-pyrifera_M_contig83703.19548.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=296bp
PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTD
KGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYR
GEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDR
FVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRN
AFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQA
EMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG
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mRNA from alignment at M-pyrifera_M_contig83703:3..890-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83703.19548.1 ID=mRNA_M-pyrifera_M_contig83703.19548.1|Name=mRNA_M-pyrifera_M_contig83703.19548.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig83703:3..890- (Macrocystis pyrifera P11B4 male)
CCGCCGCCGAAGTTCTCGGTCGAGGAGTGCAAAGAGAAGGACATGACCTA
TAGCGCGCCGATCTTCGTGCGCGCTCGCTTCATGAACTCCAACACCGGTG
AGATCAAGGAGCAGACGGTCTTCATGGGCGACTTCCCCATGATGACCGAC
AAGGGCACCTTCATCATCAACGGCACCGAGCGTGTGGTCGTCTCCCAGCT
CGTGCGTTCGCCGGGCGTCATCTTCCAGCCGGGTGAGCGGTTCCGTCTTC
GCAACCTGAGCAAGCACCAGCTCGTCACCGGCACCGTGCATCCCTACCGC
GGTGAGTGGATCGAGTTCGACGTCGAGCAAAAGCCCGGCAAGGACGTCAC
CGCCGGCGCCCGCGTCGCCCGCAAGCGTCGCATCTCGCTGTTCACCCTCC
TGCGGGCCCTCGGCTACGACGAGGAGAACGAGCCCGGATTCCTCGACCGC
TTCGTCGAGTACTTCGACTTCCTCGAAGGTCAGTGGGAGAAGGACAAGGA
GATCGCCCCGACCCAGGAAGAGGCGCTGCTCGAGATCTACAAGCGAGCCC
GCCCCGGCGAGCCGCCCACGGTCGAGTCTGCTCGTGCCTACTTCCGCAAT
GCGTTCTTCGAGCCCCGCCGCTACGACCTCAGCCGGGTCGGCCGCTACAA
GCTCAACCGCAAGCTCGGTCCCGAACTCGACTTCCTCCAGAAGCAGTTCA
AGCTCGATCTCGAGCGCCCCGATCCCGACCAGTCGGTGCTGGCCCAGGCC
GAGATGCTTGCCGCCACCACCTATCTGCTCAACCTCGCCAAGGGCGAGCC
GGGCTACCGCCTCGACGACCAGGACCACTTCGCCAACCGCCGCATCCGCA
GTGTCGGCGAGCTGATCCAGAACCAGGTCCGGATCGGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83703:3..890-

>mRNA_M-pyrifera_M_contig83703.19548.1 ID=mRNA_M-pyrifera_M_contig83703.19548.1|Name=mRNA_M-pyrifera_M_contig83703.19548.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1776bp|location=Sequence derived from alignment at M-pyrifera_M_contig83703:3..890- (Macrocystis pyrifera P11B4 male)
CCGCCGCCGAAGTTCTCGGTCGAGGAGTGCAAAGAGAAGGACATGACCTA
TAGCGCGCCGATCTTCGTGCGCGCTCGCTTCATGAACTCCAACACCGGTG
AGATCAAGGAGCAGACGGTCTTCATGGGCGACTTCCCCATGATGACCGAC
AAGGGCACCTTCATCATCAACGGCACCGAGCGTGTGGTCGTCTCCCAGCT
CGTGCGTTCGCCGGGCGTCATCTTCCAGCCGGGTGAGCGGTTCCGTCTTC
GCAACCTGAGCAAGCACCAGCTCGTCACCGGCACCGTGCATCCCTACCGC
GGTGAGTGGATCGAGTTCGACGTCGAGCAAAAGCCCGGCAAGGACGTCAC
CGCCGGCGCCCGCGTCGCCCGCAAGCGTCGCATCTCGCTGTTCACCCTCC
TGCGGGCCCTCGGCTACGACGAGGAGAACGAGCCCGGATTCCTCGACCGC
TTCGTCGAGTACTTCGACTTCCTCGAAGGTCAGTGGGAGAAGGACAAGGA
GATCGCCCCGACCCAGGAAGAGGCGCTGCTCGAGATCTACAAGCGAGCCC
GCCCCGGCGAGCCGCCCACGGTCGAGTCTGCTCGTGCCTACTTCCGCAAT
GCGTTCTTCGAGCCCCGCCGCTACGACCTCAGCCGGGTCGGCCGCTACAA
GCTCAACCGCAAGCTCGGTCCCGAACTCGACTTCCTCCAGAAGCAGTTCA
AGCTCGATCTCGAGCGCCCCGATCCCGACCAGTCGGTGCTGGCCCAGGCC
GAGATGCTTGCCGCCACCACCTATCTGCTCAACCTCGCCAAGGGCGAGCC
GGGCTACCGCCTCGACGACCAGGACCACTTCGCCAACCGCCGCATCCGCA
GTGTCGGCGAGCTGATCCAGAACCAGGTCCGGATCGGTCCGCCGCCGAAG
TTCTCGGTCGAGGAGTGCAAAGAGAAGGACATGACCTATAGCGCGCCGAT
CTTCGTGCGCGCTCGCTTCATGAACTCCAACACCGGTGAGATCAAGGAGC
AGACGGTCTTCATGGGCGACTTCCCCATGATGACCGACAAGGGCACCTTC
ATCATCAACGGCACCGAGCGTGTGGTCGTCTCCCAGCTCGTGCGTTCGCC
GGGCGTCATCTTCCAGCCGGGTGAGCGGTTCCGTCTTCGCAACCTGAGCA
AGCACCAGCTCGTCACCGGCACCGTGCATCCCTACCGCGGTGAGTGGATC
GAGTTCGACGTCGAGCAAAAGCCCGGCAAGGACGTCACCGCCGGCGCCCG
CGTCGCCCGCAAGCGTCGCATCTCGCTGTTCACCCTCCTGCGGGCCCTCG
GCTACGACGAGGAGAACGAGCCCGGATTCCTCGACCGCTTCGTCGAGTAC
TTCGACTTCCTCGAAGGTCAGTGGGAGAAGGACAAGGAGATCGCCCCGAC
CCAGGAAGAGGCGCTGCTCGAGATCTACAAGCGAGCCCGCCCCGGCGAGC
CGCCCACGGTCGAGTCTGCTCGTGCCTACTTCCGCAATGCGTTCTTCGAG
CCCCGCCGCTACGACCTCAGCCGGGTCGGCCGCTACAAGCTCAACCGCAA
GCTCGGTCCCGAACTCGACTTCCTCCAGAAGCAGTTCAAGCTCGATCTCG
AGCGCCCCGATCCCGACCAGTCGGTGCTGGCCCAGGCCGAGATGCTTGCC
GCCACCACCTATCTGCTCAACCTCGCCAAGGGCGAGCCGGGCTACCGCCT
CGACGACCAGGACCACTTCGCCAACCGCCGCATCCGCAGTGTCGGCGAGC
TGATCCAGAACCAGGTCCGGATCGGT
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