prot_M-pyrifera_M_contig83703.19548.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig83703.19548.1
Unique Name	prot_M-pyrifera_M_contig83703.19548.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	296

Homology

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BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A2E8L9B1_9ACTN (DNA-directed RNA polymerase (Fragment) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L9B1_9ACTN)

HSP 1 Score: 568 bits (1464), Expect = 4.770e-200
Identity = 280/296 (94.59%), Postives = 292/296 (98.65%), Query Frame = 0

Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 296
            PPPK++VEECKEKDM+Y+APIFVRARFMN+NTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGT+HPYRGEWIE DVEQKPGKDVTAGARVARKRR+SLFTLLRALGYDEENEPGFLDRFV++FDFLEGQWEKD+EIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFL +QF LDLERP+ DQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   73 PPPKYTVEECKEKDMSYTAPIFVRARFMNANTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTIHPYRGEWIEMDVEQKPGKDVTAGARVARKRRLSLFTLLRALGYDEENEPGFLDRFVQHFDFLEGQWEKDREIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLTEQFGLDLERPEEDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 368

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BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A2D6U8F6_9ACTN (DNA-directed RNA polymerase subunit beta n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U8F6_9ACTN)

HSP 1 Score: 572 bits (1473), Expect = 2.930e-193
Identity = 283/296 (95.61%), Postives = 292/296 (98.65%), Query Frame = 0

Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 296
            PPPK++VEECKEKDMTYSAPIFVRARFMN+NTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGT+HPYRGEWIE DVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFV++FDFLEGQWEKD+EIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFL +QF LDLERP+ DQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   77 PPPKYTVEECKEKDMTYSAPIFVRARFMNANTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTIHPYRGEWIEMDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVQHFDFLEGQWEKDREIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLTEQFGLDLERPEQDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 372

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BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A354BBG9_9ACTN (DNA-directed RNA polymerase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354BBG9_9ACTN)

HSP 1 Score: 546 bits (1407), Expect = 1.870e-188
Identity = 271/283 (95.76%), Postives = 279/283 (98.59%), Query Frame = 0

Query:   14 DMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 296
            DMTYSAPIFVRARFMN+NTGEIKEQTVFMGDFPMMTDKGTFIINGTER+VVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGT+HPYRGEWIE DVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFV++FDFLEGQWEKD+EIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFL +QF LDLERP+ DQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:    1 DMTYSAPIFVRARFMNANTGEIKEQTVFMGDFPMMTDKGTFIINGTERIVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTIHPYRGEWIEMDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVQHFDFLEGQWEKDREIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLTEQFGLDLERPEQDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 283

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BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A6B1AXS1_9ACTN (DNA-directed RNA polymerase subunit beta n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AXS1_9ACTN)

HSP 1 Score: 550 bits (1416), Expect = 7.940e-185
Identity = 271/296 (91.55%), Postives = 285/296 (96.28%), Query Frame = 0

Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 296
            PPPKFSVEECKEKDMTYSAPIFVRARFMN+NTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGER+RLRN SKHQ+VTGT+HPYRGEWIEFDVEQKPGKD TAGARVARKRRISLFTLLRALGYDEENEPGFLDR VE+F  LEGQWEKDK+IAPT+EE+LLEIYKRARPGEP TVESAR+YFRNAFF+ RRYDLSRVGRYKLNRKLGPE++FL+KQF LDL+RPDPDQSVLAQAEMLAATTYLLNLA   PGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   74 PPPKFSVEECKEKDMTYSAPIFVRARFMNANTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERYRLRNRSKHQIVTGTIHPYRGEWIEFDVEQKPGKDTTAGARVARKRRISLFTLLRALGYDEENEPGFLDRLVEHFYLLEGQWEKDKDIAPTREESLLEIYKRARPGEPHTVESARSYFRNAFFDSRRYDLSRVGRYKLNRKLGPEIEFLEKQFNLDLQRPDPDQSVLAQAEMLAATTYLLNLAHATPGYRLDDQDHFANRRIRSVGELIQNQVRIG 369

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BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A2D7RZC4_9ACTN (DNA-directed RNA polymerase subunit beta n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RZC4_9ACTN)

HSP 1 Score: 548 bits (1413), Expect = 2.450e-184
Identity = 274/296 (92.57%), Postives = 283/296 (95.61%), Query Frame = 0

Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 296
            PPPK++VEECKEKDM+Y+APIFVRARFMN+NTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVI  PGERFRLRNLSKHQLVTGT+ PYRGEWIE DVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPG LDRFV++FDFLEGQWEKD+EIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFL  Q  LDLERP  DQSVLAQAEM AATTYLLNLAKGEPGYRLD QDHFANRRIRSVGELIQNQVRIG
Sbjct:   77 PPPKYTVEECKEKDMSYTAPIFVRARFMNANTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIXXPGERFRLRNLSKHQLVTGTIXPYRGEWIEMDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGXLDRFVQHFDFLEGQWEKDREIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLTXQXGLDLERPXXDQSVLAQAEMXAATTYLLNLAKGEPGYRLDXQDHFANRRIRSVGELIQNQVRIG 372

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BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A3M2G8F7_ACTSX (DNA-directed RNA polymerase subunit beta n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G8F7_ACTSX)

HSP 1 Score: 543 bits (1398), Expect = 3.480e-182
Identity = 263/296 (88.85%), Postives = 286/296 (96.62%), Query Frame = 0

Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 296
            P PKF+VEECKE+DMTY+APIFVRARFMN++TGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNL+KHQLVTGT+HPYRGEWIEFDVEQKPGKDVTAGARVARKRR+SLFT+LRALGYDEEN PGFL+R+VE+FDFL GQWEKD+E+APTQEE+L+EIYKRARPGEPPT+ESARAYFRNAFFE RRYDLSRVGRYKLNRKLGPELD+++  F +D+ERPDPDQ VL+ AEMLA TTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   70 PYPKFTVEECKEQDMTYAAPIFVRARFMNADTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLAKHQLVTGTIHPYRGEWIEFDVEQKPGKDVTAGARVARKRRLSLFTVLRALGYDEENAPGFLERYVEHFDFLAGQWEKDRELAPTQEESLIEIYKRARPGEPPTIESARAYFRNAFFEQRRYDLSRVGRYKLNRKLGPELDWIEATFGIDVERPDPDQQVLSPAEMLATTTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 365

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BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A7Y1XVS8_9ACTN (DNA-directed RNA polymerase subunit beta n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7Y1XVS8_9ACTN)

HSP 1 Score: 541 bits (1394), Expect = 1.590e-181
Identity = 263/296 (88.85%), Postives = 284/296 (95.95%), Query Frame = 0

Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 296
            PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTD+GTF+INGTERVVVSQLVRSPGVIFQPGER+RLRNL+K+QLVTGT+HPYRGEWIEFDVEQKPGKDVTAG RVARKRR+SLF LLRALGYDEEN PGFLD+FV +FDFLEGQWEKD+E+APTQEEAL+EIYKRARPGEPP+ ESAR YFRNAFFE RRYDLSRVGRYKLNRKLGPE+D L+K FK+ LERPDPDQSVL+QAE+LA  +YLL+LAKG+PGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   73 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDRGTFVINGTERVVVSQLVRSPGVIFQPGERYRLRNLAKYQLVTGTIHPYRGEWIEFDVEQKPGKDVTAGTRVARKRRLSLFVLLRALGYDEENAPGFLDKFVNHFDFLEGQWEKDRELAPTQEEALIEIYKRARPGEPPSAESARNYFRNAFFESRRYDLSRVGRYKLNRKLGPEMDNLEKLFKIKLERPDPDQSVLSQAEVLATCSYLLHLAKGDPGYRLDDQDHFANRRIRSVGELIQNQVRIG 368

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BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A381WSY4_9ZZZZ (DNA-directed RNA polymerase (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381WSY4_9ZZZZ)

HSP 1 Score: 524 bits (1350), Expect = 3.410e-181
Identity = 253/296 (85.47%), Postives = 280/296 (94.59%), Query Frame = 0

Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 296
            PPPKFSVEECKEKDMT+SAPIFVRA F N+NTGEIKEQTVFMGDFP+MT+KGTF+INGTERVVVSQLVRSPGVIFQPGER+RLRNL+KHQLVTGT+HPYRGEWIEFDVEQKPGKDVTAG RVARKRR+S+FTLLRALGYDEENEPGFLDRFV +FD+LEGQWEKDK+IAPTQEE+LLEIYKR RPGEP TVE+ARAY RNAFFE RRYDLSRVGRYKLNRKLGPE++ +++ F ++LERPDPD  VL ++E+LA  TYLL+LAKGEPGYRLDDQDHFANRRIRSVGELIQNQ+RIG
Sbjct:   73 PPPKFSVEECKEKDMTFSAPIFVRACFKNANTGEIKEQTVFMGDFPVMTEKGTFVINGTERVVVSQLVRSPGVIFQPGERYRLRNLAKHQLVTGTIHPYRGEWIEFDVEQKPGKDVTAGTRVARKRRLSMFTLLRALGYDEENEPGFLDRFVRHFDYLEGQWEKDKDIAPTQEESLLEIYKRVRPGEPATVEAARAYLRNAFFESRRYDLSRVGRYKLNRKLGPEIEKIEELFGIELERPDPDSQVLTRSEVLATCTYLLHLAKGEPGYRLDDQDHFANRRIRSVGELIQNQLRIG 368

[Close]

BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A7W0LSQ4_9ACTN (DNA-directed RNA polymerase (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0LSQ4_9ACTN)

HSP 1 Score: 509 bits (1311), Expect = 1.740e-179
Identity = 253/297 (85.19%), Postives = 274/297 (92.26%), Query Frame = 0

Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKL-DLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 296
            PPPKFSVEECKEKDMT+SAPIFVRARFMN++TGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNL+KHQLVTGT+HPYRGEWIEFDVEQKPGKDVTAG RVARKRR+SLF LLRALGYDEE+ PGFL+R V +FDFLEGQWEKD+ +APTQEEAL+EIYKRARPGEPPT +++R YF NAFF  +RYDLSRVGRYKLNRKLGPEL  LQ+ F L DL+ PDPDQS L++ E+LAA TYLLNLA G  GYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   70 PPPKFSVEECKEKDMTFSAPIFVRARFMNASTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLAKHQLVTGTIHPYRGEWIEFDVEQKPGKDVTAGTRVARKRRLSLFILLRALGYDEEHHPGFLERLVRHFDFLEGQWEKDQGLAPTQEEALIEIYKRARPGEPPTPDASRNYFENAFFNGKRYDLSRVGRYKLNRKLGPELGKLQELFGLSDLDLPDPDQSTLSRCEVLAACTYLLNLADGVQGYRLDDQDHFANRRIRSVGELIQNQVRIG 366

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BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Match: A0A6I3F3D3_9ACTN (DNA-directed RNA polymerase subunit beta n=10 Tax=root TaxID=1 RepID=A0A6I3F3D3_9ACTN)

HSP 1 Score: 536 bits (1380), Expect = 1.890e-179
Identity = 262/296 (88.51%), Postives = 283/296 (95.61%), Query Frame = 0

Query:    1 PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDRFVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRNAFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQAEMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 296
            PPPKF+VEECKEKDMT+SAPIFVRARFMN++TGEIKEQTVFMGDFPMMTDKGTF+INGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGT+HPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEEN PGFLDRFV +FDFLEGQW+KD+E++PTQ+EAL+EIYKRARPGEPP+V+SARAYFRNAFFE RRYDLSRVGRYKLNRKLGPELD L+K F + LERP+ DQSVL  AE+LA+T+YLLNL   EPGYRLDDQDHFANRRIRSVGELIQNQVRIG
Sbjct:   73 PPPKFTVEECKEKDMTFSAPIFVRARFMNASTGEIKEQTVFMGDFPMMTDKGTFVINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTIHPYRGEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENYPGFLDRFVRHFDFLEGQWDKDREVSPTQDEALVEIYKRARPGEPPSVDSARAYFRNAFFENRRYDLSRVGRYKLNRKLGPELDKLEKLFNITLERPELDQSVLTPAEVLASTSYLLNLVNAEPGYRLDDQDHFANRRIRSVGELIQNQVRIG 368

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig83703.19548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2E8L9B1_9ACTN	4.770e-200	94.59	DNA-directed RNA polymerase (Fragment) n=2 Tax=Aci...	[more]
A0A2D6U8F6_9ACTN	2.930e-193	95.61	DNA-directed RNA polymerase subunit beta n=6 Tax=A...	[more]
A0A354BBG9_9ACTN	1.870e-188	95.76	DNA-directed RNA polymerase (Fragment) n=1 Tax=Aci...	[more]
A0A6B1AXS1_9ACTN	7.940e-185	91.55	DNA-directed RNA polymerase subunit beta n=1 Tax=A...	[more]
A0A2D7RZC4_9ACTN	2.450e-184	92.57	DNA-directed RNA polymerase subunit beta n=1 Tax=A...	[more]
A0A3M2G8F7_ACTSX	3.480e-182	88.85	DNA-directed RNA polymerase subunit beta n=1 Tax=A...	[more]
A0A7Y1XVS8_9ACTN	1.590e-181	88.85	DNA-directed RNA polymerase subunit beta n=2 Tax=A...	[more]
A0A381WSY4_9ZZZZ	3.410e-181	85.47	DNA-directed RNA polymerase (Fragment) n=1 Tax=mar...	[more]
A0A7W0LSQ4_9ACTN	1.740e-179	85.19	DNA-directed RNA polymerase (Fragment) n=1 Tax=Aci...	[more]
A0A6I3F3D3_9ACTN	1.890e-179	88.51	DNA-directed RNA polymerase subunit beta n=10 Tax=...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.1100.10		coord: 1..73 e-value: 4.8E-33 score: 116.5
None	No IPR available	PANTHER	PTHR20856:SF20	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA	coord: 3..296
None	No IPR available	SUPERFAMILY	64484	beta and beta-prime subunits of DNA dependent RNA-polymerase	coord: 2..295
IPR007644	RNA polymerase, beta subunit, protrusion	PFAM	PF04563	RNA_pol_Rpb2_1	coord: 8..294 e-value: 2.7E-16 score: 62.3
IPR007642	RNA polymerase Rpb2, domain 2	PFAM	PF04561	RNA_pol_Rpb2_2	coord: 69..283 e-value: 1.0E-20 score: 74.1
IPR037034	RNA polymerase Rpb2, domain 2 superfamily	GENE3D	3.90.1110.10		coord: 74..273 e-value: 2.0E-49 score: 169.8
IPR015712	DNA-directed RNA polymerase, subunit 2	PANTHER	PTHR20856	DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2	coord: 3..296

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig83703	contig	M-pyrifera_M_contig83703:3..890 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig83703.19548.1	mRNA_M-pyrifera_M_contig83703.19548.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig83703 3..890 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig83703.19548.1 ID=prot_M-pyrifera_M_contig83703.19548.1|Name=mRNA_M-pyrifera_M_contig83703.19548.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=296bp
PPPKFSVEECKEKDMTYSAPIFVRARFMNSNTGEIKEQTVFMGDFPMMTD
KGTFIINGTERVVVSQLVRSPGVIFQPGERFRLRNLSKHQLVTGTVHPYR
GEWIEFDVEQKPGKDVTAGARVARKRRISLFTLLRALGYDEENEPGFLDR
FVEYFDFLEGQWEKDKEIAPTQEEALLEIYKRARPGEPPTVESARAYFRN
AFFEPRRYDLSRVGRYKLNRKLGPELDFLQKQFKLDLERPDPDQSVLAQA
EMLAATTYLLNLAKGEPGYRLDDQDHFANRRIRSVGELIQNQVRIG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007644	RNA_pol_bsu_protrusion
IPR007642	RNA_pol_Rpb2_2
IPR037034	RNA_pol_Rpb2_2_sf
IPR015712	DNA-dir_RNA_pol_su2