prot_M-pyrifera_M_contig109354.1948.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig109354.1948.1
Unique Nameprot_M-pyrifera_M_contig109354.1948.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length200
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig109354.1948.1 vs. uniprot
Match: A0A7S2V8M2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8M2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.490e-7
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:    1 NKTDPGVCGCGVSDADTDSDGTVDCNDLCINDPTK 35
            NK   GVCGCGV+DADTDSDGTVDC D+C NDP K
Sbjct:    2 NKATEGVCGCGVADADTDSDGTVDCEDVCPNDPLK 36
[Close]
BLAST of mRNA_M-pyrifera_M_contig109354.1948.1 vs. uniprot
Match: UPI001CBB0724 (T9SS type A sorting domain-containing protein n=1 Tax=Aestuariivivens sp. NBU2969 TaxID=2873267 RepID=UPI001CBB0724)

HSP 1 Score: 58.2 bits (139), Expect = 7.900e-7
Identity = 25/33 (75.76%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:    1 NKTDPGVCGCGVSDADTDSDGTVDCNDLCINDP 33
            NKTDPGVCGCG ++ DTDSDG +DCNDL IN P
Sbjct:   15 NKTDPGVCGCGTAETDTDSDGVLDCNDLEINSP 47
[Close]
BLAST of mRNA_M-pyrifera_M_contig109354.1948.1 vs. uniprot
Match: A0A7C4JW05_9BACT (HYR domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C4JW05_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 7.190e-5
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 0 
Query:    1 NKTDPGVCGCGVSDADTDSDGTVDCNDLCINDP 33
            NKT+PG+CGCGV+D DTD DG +DC D C N P
Sbjct:  731 NKTEPGICGCGVADVDTDGDGLLDCQDNCPNVP 763
[Close]
BLAST of mRNA_M-pyrifera_M_contig109354.1948.1 vs. uniprot
Match: A0A3M1CHQ9_9DELT (Serine protease (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1CHQ9_9DELT)

HSP 1 Score: 53.1 bits (126), Expect = 8.890e-5
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 0 
Query:    1 NKTDPGVCGCGVSDADTDSDGTVDCNDLC 29
            +KTDPGVCGCGV+D D+DSDG  DCND C
Sbjct:  592 DKTDPGVCGCGVADTDSDSDGIADCNDNC 620
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109354.1948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S2V8M2_9STRA1.490e-777.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI001CBB07247.900e-775.76T9SS type A sorting domain-containing protein n=1 ... [more]
A0A7C4JW05_9BACT7.190e-566.67HYR domain-containing protein (Fragment) n=1 Tax=B... [more]
A0A3M1CHQ9_9DELT8.890e-575.86Serine protease (Fragment) n=1 Tax=Deltaproteobact... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028974TSP type-3 repeatSUPERFAMILY103647TSP type-3 repeatcoord: 105..200
IPR028974TSP type-3 repeatSUPERFAMILY103647TSP type-3 repeatcoord: 9..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109354contigM-pyrifera_M_contig109354:3..602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109354.1948.1mRNA_M-pyrifera_M_contig109354.1948.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig109354 3..602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig109354.1948.1 ID=prot_M-pyrifera_M_contig109354.1948.1|Name=mRNA_M-pyrifera_M_contig109354.1948.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp
NKTDPGVCGCGVSDADTDSDGTVDCNDLCINDPTKTDPGQCGCGNPDVFS
DADSVADCNDGCPTDSTKTSPGVCGCGIPDVDADSDGTLDCNDACPTDPL
KTDPGQCDCLNPDVQSDSDGVADCNDQCPTDGDKVSPGVCGCGVPDTDTD
SDGTPDCNDQCPADSGKTTPGICGCGASDTADSDSDGVVDCLDQCVGSPD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028974TSP_type-3_rpt