mRNA_M-pyrifera_M_contig83172.19426.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig83172.19426.1 vs. uniprot
Match: A0A3N9NIP3_9BACT (Response regulator (Fragment) n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3N9NIP3_9BACT) HSP 1 Score: 145 bits (367), Expect = 2.910e-39 Identity = 75/141 (53.19%), Postives = 100/141 (70.92%), Query Frame = 1 Query: 1 ILIIDDNQEIRSYLNEHLSSNYRILEEENGLEGLKSAEEHLPDIIICDVMMPKMDGYEFCKALKDDLETDFIPDILLTAKAEQSDKLEGLGLGVDDYIMKPFDIEEVKARTDNLIQSRKKLMDRYSK------SGIKLELP 405 ILI++DN ++R Y++ +L Y+ILE ENG EGL A E +PD++I D+MMP+MDG E C+ LK D T+ IP I+LTAKA++ KLEGL G DDYI+KPFD EE++ R NLI+ RKKL +RY K +G K+ LP Sbjct: 184 ILIVEDNTDLRKYISGNLLEQYQILEAENGREGLDKAIESIPDLVISDLMMPEMDGKEMCEFLKKDTRTNHIPVIMLTAKADRESKLEGLETGADDYIIKPFDAEELQVRVKNLIEQRKKLRERYRKEFLMDPAGHKIPLP 324
BLAST of mRNA_M-pyrifera_M_contig83172.19426.1 vs. uniprot
Match: UPI0004005902 (hybrid sensor histidine kinase/response regulator transcription factor n=1 Tax=Salisaeta longa TaxID=503170 RepID=UPI0004005902) HSP 1 Score: 147 bits (371), Expect = 2.140e-38 Identity = 67/132 (50.76%), Postives = 101/132 (76.52%), Query Frame = 1 Query: 1 ILIIDDNQEIRSYLNEHLSSNYRILEEENGLEGLKSAEEHLPDIIICDVMMPKMDGYEFCKALKDDLETDFIPDILLTAKAEQSDKLEGLGLGVDDYIMKPFDIEEVKARTDNLIQSRKKLMDRYSKSGIKL 396 +L+++D+ E+R+Y+ HL+ YR+LE NG +GL+ A HLPD+++ D+MMP+MDG E C+ALK+ TDFIP ILLTA+AE D+++ L GVDDY+ KPFD++E+KAR NLI+SR++L +R+ + + L Sbjct: 1164 VLLVEDSAEVRTYIRLHLAKEYRVLEAVNGRDGLEQARTHLPDLVLSDLMMPEMDGLELCQALKETRATDFIPVILLTARAEMYDRIDALQEGVDDYMTKPFDVDELKARISNLIRSRRQLRERFRDAPVSL 1295
BLAST of mRNA_M-pyrifera_M_contig83172.19426.1 vs. uniprot
Match: UPI001BC61986 (Response regulator n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=UPI001BC61986) HSP 1 Score: 137 bits (346), Expect = 8.280e-38 Identity = 66/130 (50.77%), Postives = 94/130 (72.31%), Query Frame = 1 Query: 1 ILIIDDNQEIRSYLNEHLSSNYRILEEENGLEGLKSAEEHLPDIIICDVMMPKMDGYEFCKALKDDLETDFIPDILLTAKAEQSDKLEGLGLGVDDYIMKPFDIEEVKARTDNLIQSRKKLMDRYSKSGI 390 ILI++DN ++R+Y+ E + +Y E ++GL+GLK A+E +PD+II DVMMPKMDGYEFCKA++ D +T IP I+LTAK+ DK+ GL GVD Y+ KPF +E+KA NL+ R +L ++SKS + Sbjct: 8 ILIVEDNNDVRAYIREQIEDDYHTFEAQHGLQGLKMAQEKVPDLIISDVMMPKMDGYEFCKAIRKDEKTSHIPLIMLTAKSSLDDKISGLESGVDAYLTKPFSAKELKATVINLLHQRIQLRKQFSKSMV 137
BLAST of mRNA_M-pyrifera_M_contig83172.19426.1 vs. uniprot
Match: A0A1G0RUB0_9BACT (Uncharacterized protein n=1 Tax=Ignavibacteria bacterium RBG_16_36_9 TaxID=1798435 RepID=A0A1G0RUB0_9BACT) HSP 1 Score: 139 bits (349), Expect = 9.100e-38 Identity = 66/130 (50.77%), Postives = 91/130 (70.00%), Query Frame = 1 Query: 1 ILIIDDNQEIRSYLNEHLSSNYRILEEENGLEGLKSAEEHLPDIIICDVMMPKMDGYEFCKALKDDLETDFIPDILLTAKAEQSDKLEGLGLGVDDYIMKPFDIEEVKARTDNLIQSRKKLMDRYSKSGI 390 +LI++DN ++R Y+ +L + ILE NG +GL A H+PD+II DVMMPKMDG+E C LK+D T IP I+LTAKA + DK+EG G D+YIMKPFD + ++AR NLIQ R +L D +++ G+ Sbjct: 52 LLIVEDNADVRDYIKGNLKEEFIILEAANGEDGLNQAINHIPDLIISDVMMPKMDGFEMCDKLKNDERTSHIPVIMLTAKAAKQDKIEGFETGADEYIMKPFDAQVLRARIHNLIQQRNRLRDYFNREGV 181
BLAST of mRNA_M-pyrifera_M_contig83172.19426.1 vs. uniprot
Match: A0A1D8P6F4_9FLAO (Hybrid sensor histidine kinase/response regulator n=1 Tax=Urechidicola croceus TaxID=1850246 RepID=A0A1D8P6F4_9FLAO) HSP 1 Score: 145 bits (366), Expect = 1.010e-37 Identity = 69/125 (55.20%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 1 ILIIDDNQEIRSYLNEHLSSNYRILEEENGLEGLKSAEEHLPDIIICDVMMPKMDGYEFCKALKDDLETDFIPDILLTAKAEQSDKLEGLGLGVDDYIMKPFDIEEVKARTDNLIQSRKKLMDRY 375 +L+++DN E+RSYL L SNYRIL NG EGLK A+ H PDIII DV+MP+MDG+EFCK +K+ +ET IP ++LTAK D++EG+GLG D Y++KPFD+ +K R LI SRK + D+Y Sbjct: 1144 LLLVEDNSELRSYLKNELKSNYRILTAVNGKEGLKQAKAHSPDIIITDVIMPEMDGFEFCKKIKESIETSHIPLLMLTAKTRIDDRIEGIGLGADAYMIKPFDMRLLKLRLSQLITSRKLIFDKY 1268
BLAST of mRNA_M-pyrifera_M_contig83172.19426.1 vs. uniprot
Match: A0A660Z5A9_9BACT (Uncharacterized protein n=1 Tax=Ignavibacteriae bacterium TaxID=2026749 RepID=A0A660Z5A9_9BACT) HSP 1 Score: 145 bits (366), Expect = 1.010e-37 Identity = 69/130 (53.08%), Postives = 96/130 (73.85%), Query Frame = 1 Query: 1 ILIIDDNQEIRSYLNEHLSSNYRILEEENGLEGLKSAEEHLPDIIICDVMMPKMDGYEFCKALKDDLETDFIPDILLTAKAEQSDKLEGLGLGVDDYIMKPFDIEEVKARTDNLIQSRKKLMDRYSKSGI 390 +LIIDDN +IR+Y+ +L+ +YR LE NG +GL A EH+PD+I+ DVMMPKMDG+E C+ +K D + IP ILLTAKA + DK+EGL G DD+IMKPF+ +E+K R NLI+ RK++++ Y K + Sbjct: 1196 LLIIDDNPDIRNYVKGYLNKDYRTLEAGNGEDGLNKAFEHIPDLIVSDVMMPKMDGFELCEKVKTDERSSHIPVILLTAKATEQDKIEGLETGADDFIMKPFEAKELKVRVKNLIEQRKRIVEHYRKKQL 1325
BLAST of mRNA_M-pyrifera_M_contig83172.19426.1 vs. uniprot
Match: UPI001ABC7816 (response regulator n=1 Tax=Roseivirga sp. E12 TaxID=2819237 RepID=UPI001ABC7816) HSP 1 Score: 145 bits (365), Expect = 1.370e-37 Identity = 69/135 (51.11%), Postives = 99/135 (73.33%), Query Frame = 1 Query: 1 ILIIDDNQEIRSYLNEHLSSNYRILEEENGLEGLKSAEEHLPDIIICDVMMPKMDGYEFCKALKDDLETDFIPDILLTAKAEQSDKLEGLGLGVDDYIMKPFDIEEVKARTDNLIQSRKKLMDRYSKSGIKLELP 405 +L+++DN +IR+Y+ +HLS+ YR++E ENG EG + + LPD++I DVMMP DGYE C+ +K + DFIP ILLTAKAE+S K+EGL LG DDY++KPF+++E++AR NLI SR+KL + + I P Sbjct: 1147 LLVVEDNADIRTYVRKHLSTEYRVIEAENGQEGFQIVKAELPDLVISDVMMPISDGYELCRNIKQHPDLDFIPVILLTAKAEKSMKIEGLELGADDYVVKPFEVDELRARIKNLINSREKLKGILANTDITATTP 1281
BLAST of mRNA_M-pyrifera_M_contig83172.19426.1 vs. uniprot
Match: A0A660YXX2_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Ignavibacteriae bacterium TaxID=2026749 RepID=A0A660YXX2_9BACT) HSP 1 Score: 141 bits (355), Expect = 1.660e-37 Identity = 69/127 (54.33%), Postives = 94/127 (74.02%), Query Frame = 1 Query: 1 ILIIDDNQEIRSYLNEHLSSNYRILEEENGLEGLKSAEEHLPDIIICDVMMPKMDGYEFCKALKDDLETDFIPDILLTAKAEQSDKLEGLGLGVDDYIMKPFDIEEVKARTDNLIQSRKKLMDRYSK 381 ILI+DD++++R YL+ L +NY I E ENG EG+ +A E++PD+II DVMMP MDG EFC+ +K D +T IP ILLTAKA K+EGL +G DDY+ KPFD +E+ R NL++ RK+L D+Y+K Sbjct: 185 ILIVDDSKDVRIYLSSLLETNYTISEAENGEEGILAATENMPDLIISDVMMPSMDGMEFCRRIKSDWQTSDIPVILLTAKASIESKIEGLEIGADDYLTKPFDSKELFTRIKNLLEQRKRLRDKYNK 311
BLAST of mRNA_M-pyrifera_M_contig83172.19426.1 vs. uniprot
Match: A0A7Y2DEK3_9FLAO (Response regulator n=1 Tax=Pricia sp. TaxID=2268138 RepID=A0A7Y2DEK3_9FLAO) HSP 1 Score: 143 bits (360), Expect = 4.910e-37 Identity = 67/132 (50.76%), Postives = 96/132 (72.73%), Query Frame = 1 Query: 1 ILIIDDNQEIRSYLNEHLSSNYRILEEENGLEGLKSAEEHLPDIIICDVMMPKMDGYEFCKALKDDLETDFIPDILLTAKAEQSDKLEGLGLGVDDYIMKPFDIEEVKARTDNLIQSRKKLMDRYSKSGIKL 396 +L+++DN+++R +LNEHL+ +YR+L NGLEGLK A +PD+II D+MMPK+DG E C LK ++ T IP I+LTAKA +K+EGL G DDY+ KPFD E+ RT NLI+ R+KL +R++ + K+ Sbjct: 489 VLLVEDNEDMRIFLNEHLTKHYRVLTAINGLEGLKKATARIPDLIITDLMMPKLDGIELCTKLKSEITTSHIPVIMLTAKAGLENKIEGLETGADDYLTKPFDARELLVRTSNLIEQRRKLRERFASTDAKV 620
BLAST of mRNA_M-pyrifera_M_contig83172.19426.1 vs. uniprot
Match: A0A7Y8J7C1_9BACT (DNA-binding response regulator n=1 Tax=Ignavibacteriaceae bacterium TaxID=2651163 RepID=A0A7Y8J7C1_9BACT) HSP 1 Score: 135 bits (340), Expect = 6.270e-37 Identity = 65/127 (51.18%), Postives = 94/127 (74.02%), Query Frame = 1 Query: 1 ILIIDDNQEIRSYLNEHLSSNYRILEEENGLEGLKSAEEHLPDIIICDVMMPKMDGYEFCKALKDDLETDFIPDILLTAKAEQSDKLEGLGLGVDDYIMKPFDIEEVKARTDNLIQSRKKLMDRYSK 381 IL+++DN ++R Y+ E LS +Y + E NG +G++ AE +PD+II D+MMPKMDG E + LK+D T IP I+LTAK+ Q +KLEGL +G DDY+ KPFDI+E++ R +NLI R+KL +++SK Sbjct: 7 ILVVEDNYDMREYIKESLSDSYAVEEAVNGEQGVRIAETIIPDLIISDLMMPKMDGNELTRILKNDERTSHIPIIILTAKSGQENKLEGLQIGADDYLTKPFDIQELRVRVENLINIRRKLQEKFSK 133 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83172.19426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig83172.19426.1 >prot_M-pyrifera_M_contig83172.19426.1 ID=prot_M-pyrifera_M_contig83172.19426.1|Name=mRNA_M-pyrifera_M_contig83172.19426.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp ILIIDDNQEIRSYLNEHLSSNYRILEEENGLEGLKSAEEHLPDIIICDVMback to top mRNA from alignment at M-pyrifera_M_contig83172:26..433+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig83172.19426.1 ID=mRNA_M-pyrifera_M_contig83172.19426.1|Name=mRNA_M-pyrifera_M_contig83172.19426.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig83172:26..433+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig83172:26..433+ >mRNA_M-pyrifera_M_contig83172.19426.1 ID=mRNA_M-pyrifera_M_contig83172.19426.1|Name=mRNA_M-pyrifera_M_contig83172.19426.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=816bp|location=Sequence derived from alignment at M-pyrifera_M_contig83172:26..433+ (Macrocystis pyrifera P11B4 male)back to top |