mRNA_M-pyrifera_M_contig83128.19417.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83128.19417.1
Unique NamemRNA_M-pyrifera_M_contig83128.19417.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A7Y5QLB0_9BACT (Prolyl oligopeptidase family serine peptidase n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A7Y5QLB0_9BACT)

HSP 1 Score: 201 bits (512), Expect = 1.730e-60
Identity = 116/217 (53.46%), Postives = 136/217 (62.67%), Query Frame = 1
Query:    7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDETG---HSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSY 648
            LLTWNAG G CG+A     DDVG+ +A VE   +  T++D  RVYATG SNG +M  RLAA+ A     AA+APV G   +D  SF+P R V ++ IHSVDDPRALY GGLGPPFP T+ RVMH  V   L + I ANGC   P  LD R +  G   H A LL W G   GAEV HWKLTG GHAWPG A R    E + GP T V+ A  EVW++
Sbjct:  110 LLTWNAGDGCCGYALNNGVDDVGYAVAVVEDLGRR-TSIDRRRVYATGHSNGGIMSHRLAAERAG--FVAAIAPVAGS--LDLRSFAPVRAVPVMQIHSVDDPRALYEGGLGPPFPGTDNRVMHQPVQAGLDRWIVANGCATRPDTLDRRAESHGGATHRAMLLAWRGCRGGAEVRHWKLTGPGHAWPGDA-RPPGGEAISGPQTTVVRAADEVWAF 320          
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A7C3JM90_9DELT (Polyhydroxybutyrate depolymerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3JM90_9DELT)

HSP 1 Score: 193 bits (491), Expect = 2.280e-57
Identity = 106/217 (48.85%), Postives = 139/217 (64.06%), Query Frame = 1
Query:    7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDET--GHSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSYF 651
            LLTWNAG   CG+AA  + DDVGF+ A +   +  ++ +D  RVYATG SNGAM   RLAA   AS + AAVAPV G  ++   + + SR V ++++HSVDDPRALY GGLGPPFPMTN RV H  +D  + +    NGC   PR  + R+D    GH+AT   +     GAEV+ WKLTG GH WPG   + K  ER+ GP T +++A KE+W++F
Sbjct:  111 LLTWNAG-NCCGYAALNSVDDVGFVRALLAKLADRLS-IDRRRVYATGLSNGAMTAHRLAAQ--ASDLIAAVAPVAGGMVLP--TIASSRAVPVMHVHSVDDPRALYTGGLGPPFPMTNSRVFHPEIDRMITRWASHNGCAADPRVAERRSDRNRRGHTATKYVYSNCRDGAEVVLWKLTGAGHVWPG--GKQKFMERLLGPGTDIIDANKEMWNFF 319          
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A2V6ZZ51_9BACT (Polyhydroxybutyrate depolymerase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6ZZ51_9BACT)

HSP 1 Score: 189 bits (481), Expect = 5.800e-56
Identity = 109/218 (50.00%), Postives = 135/218 (61.93%), Query Frame = 1
Query:    7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDET----GHSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSY 648
            LLTWNAG G CG+AA  N DDVGF +A +   +++++ +DP RVYATG SNG MM  RLA D  AS   AA+APV G   +  ASF P+RPV +L+IHSVDDP ALY GGLGPPFP T  RV H  V+  L +    + C   PR ++ RT  +     H+ATLL W     G EV  WKLT  GH WPG      LPE++ GP T  ++A  EVW +
Sbjct:   92 LLTWNAG-GCCGYAAAQNVDDVGFTVAVLRDVARNVS-IDPARVYATGHSNGGMMTYRLAID--ASERVAAIAPVAGA--MQAASFPPARPVAVLHIHSVDDPGALYAGGLGPPFPGTQSRVTHRAVEPELRRWAAQDRCPAEPRTVEQRTTPSRGGPDHTATLLVWAPCAGGTEVQLWKLTVAGHGWPG--GHVLLPEKIMGPETVTIDAALEVWRF 301          
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A1F7LCB1_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium GWA2_70_23 TaxID=1802095 RepID=A0A1F7LCB1_9BACT)

HSP 1 Score: 187 bits (474), Expect = 4.550e-55
Identity = 108/214 (50.47%), Postives = 138/214 (64.49%), Query Frame = 1
Query:    7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTD-----ETGHSATLLGWFGGP--PGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNA 627
            LLTWNAG   CG+A+ T  DDV F++A +   ++ +  +DP RVYATG SNGAM+  RLA +  A    A +AP+ G  + D  SF P+RPV +L+IHSVDDPRALY GGLGPPFP T+ R+ H  V+  LA+ +  +GC G PR  + RT      + GH+ATLL    GP   GAEV  WKLTG GH WPG     +LPER+ GP T V++A
Sbjct:   98 LLTWNAG-SCCGYASDTKVDDVAFVVALLRDLARGLP-LDPTRVYATGHSNGAMLAYRLAVE--APERIATIAPIAGMMVAD--SFLPARPVPLLHIHSVDDPRALYAGGLGPPFPFTSTRIGHRAVEPELARWVAHDGCPGEPRVAEHRTAPAGGRDAGHTATLL--VRGPCAGGAEVGLWKLTGAGHGWPG--EPSQLPERIMGPDTNVISA 301          
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A2V7CCS4_9BACT (Polyhydroxybutyrate depolymerase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7CCS4_9BACT)

HSP 1 Score: 183 bits (465), Expect = 1.610e-54
Identity = 105/218 (48.17%), Postives = 131/218 (60.09%), Query Frame = 1
Query:    7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDET----GHSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSY 648
            LLTWNAG G CG+AA  N DDVGF +A +   ++++  VDP RVYATG SNGAMM  R+A +  AS   AA+APV G    +   F P  PV +L+IHSVDDPRALY GGLGPPFP T  RV+H  V+  + + +  + C   PR  + RT        H+A  L W     G EV  W+LTG GH WPG   R  LPE+V GP T  ++A  E W +
Sbjct:   15 LLTWNAG-GCCGYAAAQNVDDVGFAVAVLRDVARNVL-VDPTRVYATGHSNGAMMAYRMAIE--ASERIAAIAPVAGAMQTER--FPPPSPVPVLHIHSVDDPRALYTGGLGPPFPGTQSRVVHRAVEGEIRRWVAHDRCPSEPRMAEQRTAPAPGGPDHTAARLVWAPCAAGTEVQLWRLTGAGHGWPGSHVR--LPEKVMGPDTVTIDAALEAWRF 224          
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A534V505_9DELT (Polyhydroxybutyrate depolymerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534V505_9DELT)

HSP 1 Score: 184 bits (466), Expect = 2.550e-53
Identity = 101/217 (46.54%), Postives = 136/217 (62.67%), Query Frame = 1
Query:    7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDET--GHSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSYF 651
            LLTWNAG   C ++   N DDVGFI A V   ++ I  +D  RVYATG SNG MM  RLAA+  A+ + AA+APV G  +    + + +R V ++++HSVDDPRALY GGLGPPFPMT   V H N+D  +A+ ++ +GC   P   + R D    GH+AT   +     GAEV  WKLTG GH WPG   + K  ER+ GP+T +++A  E+W++F
Sbjct:  137 LLTWNAGTC-CAYSVINNVDDVGFIRALVADLAERIP-IDRRRVYATGLSNGGMMAHRLAAE--AADLIAAIAPVAGGMVFP--AITAARSVPVMHLHSVDDPRALYTGGLGPPFPMTKSHVFHPNIDQMIARWVKHDGCAAQPAVTERRADSDTRGHTATRYVYSNCRDGAEVSLWKLTGAGHVWPG--GKQKFMERLLGPSTDIIDANTEMWNFF 345          
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A1G0FM83_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RBG_16_66_13 TaxID=1798267 RepID=A0A1G0FM83_9GAMM)

HSP 1 Score: 182 bits (463), Expect = 3.620e-53
Identity = 105/222 (47.30%), Postives = 135/222 (60.81%), Query Frame = 1
Query:    1 ETLLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDETGHSATLLG---WFGGP--PGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSYF 651
            E LLTWNAG G CG+A   + DDVGF+ A ++   + +T +D  R+YATG SNGAMM  RL  +  A  V +A+APV G   VD  SF P R + +L+IHSVDDPRALY GG GPPFP TN+ V H  V+T L      N C   P   DSR+ E+G   +L     W  GP   GAE+  WKL+G GH WPG     +    V GP+T V++A +E+W++F
Sbjct:  104 ERLLTWNAG-GCCGYAQDESIDDVGFVRALLDDL-EDVTHIDRARIYATGLSNGAMMAYRLGME--AGDVISAIAPVAGAMRVD--SFEPVRQLPILHIHSVDDPRALYGGGTGPPFPFTNRTVDHVPVETVLELWAEYNACPSEPTLADSRSTESGAETSLQTAELWNYGPCESGAEIALWKLSGAGHVWPG--GDPEFLTNVLGPSTAVIDANREMWAFF 317          
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A2D6BJ04_9DELT (Polyhydroxybutyrate depolymerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BJ04_9DELT)

HSP 1 Score: 182 bits (462), Expect = 8.880e-53
Identity = 105/223 (47.09%), Postives = 132/223 (59.19%), Query Frame = 1
Query:    7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPR---QLDSRTDETGHSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSYFLSHPR 666
            LLTWN G   CG A +  ADDVGF LA ++  + S+  VD  RVYATG SNGAMM  RLAA+  A    AA+APV G   +D   + PS P+ +++ HSVDD RALY GGLGPPFP T  RV H  V+T LA    A  C   P    +L+   D+ GH+A    W     G EV+ WKL+G GH WPG A   KL  R+ G  T +++A  E+W +F +H R
Sbjct:  122 LLTWNVGHC-CGLALERKADDVGFSLAVLDDLA-SLVPVDSTRVYATGLSNGAMMAMRLAAE--APERIAAIAPVAGAAPLDR--YPPSAPMPVMHFHSVDDERALYEGGLGPPFPFTRSRVDHIGVETTLAAWREAASCPAEPEVAARLEGEGDDAGHTAQRYRWGACEGGTEVILWKLSGAGHVWPGAA---KLRPRLLGAPTKIVDANTEMWRFFQAHRR 335          
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A317H7Z7_9PROT (Polyhydroxybutyrate depolymerase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317H7Z7_9PROT)

HSP 1 Score: 181 bits (458), Expect = 2.030e-52
Identity = 111/222 (50.00%), Postives = 135/222 (60.81%), Query Frame = 1
Query:    7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDETG----HSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSYFLSH 660
            LLTWNAG   CG A K N DDVGF  A +E  +Q  T +D  R+YATG SNGAMM  RLAA+  AS + AA+APV G  +VD   F PSRP+ +L+IHSVDDPRA Y GGLGP FP+TN RVMH  V+  +A+    +GC   PR  D     TG    H+AT + +     G  V+ WKLTG GH WPG      LP  V G  T V++A  E+W +F  H
Sbjct:  111 LLTWNAGTC-CGSAQKENVDDVGFARAVIEDLTQR-TPIDRNRIYATGLSNGAMMAYRLAAE--ASDLIAAIAPVAGGEMVD---FHPSRPMAILHIHSVDDPRAQYAGGLGPSFPLTNSRVMHPAVEQTIARWATFDGCPRQPR-ADVTLRGTGKTATHTATRITYAPCKAGTTVILWKLTGSGHVWPG-GRLDYLPG-VLGAGTDVIDANDEMWKFFSRH 322          
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A353VEA9_9BACT (Polyhydroxybutyrate depolymerase n=2 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A353VEA9_9BACT)

HSP 1 Score: 178 bits (451), Expect = 2.210e-51
Identity = 109/219 (49.77%), Postives = 133/219 (60.73%), Query Frame = 1
Query:    7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRT---DETGHSATLLGWFGGP--PGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSY 648
            LLTWNAG   CG A   N +DVGF LA V      +  +D  RVYATG SNGAMM  R+A + AA R+ AA+APV G  + D   F+P+ PV +L+IHSVDDPRALY GGLGPPFP+T+ RV H  V+  LA+ I   GC    + ++ R    D  G   T   W  GP   GA V  WKLTG GH WPG      LPER+ GP T V++A +EVW +
Sbjct:  106 LLTWNAGEC-CGFARDANVNDVGFALALVAALGADLP-LDRRRVYATGHSNGAMMAYRVALE-AAERI-AAIAPVAGMMVADP--FAPAAPVPVLHIHSVDDPRALYAGGLGPPFPLTSVRVAHRPVEAGLARWIARAGCPAAGQVVEERATPPDARGRRHTATRWRWGPCASGAGVELWKLTGAGHGWPGGP--SPLPERLTGPDTTVISAAEEVWRF 316          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y5QLB0_9BACT1.730e-6053.46Prolyl oligopeptidase family serine peptidase n=1 ... [more]
A0A7C3JM90_9DELT2.280e-5748.85Polyhydroxybutyrate depolymerase n=1 Tax=Deltaprot... [more]
A0A2V6ZZ51_9BACT5.800e-5650.00Polyhydroxybutyrate depolymerase n=1 Tax=Candidatu... [more]
A0A1F7LCB1_9BACT4.550e-5550.47Uncharacterized protein n=1 Tax=Candidatus Rokubac... [more]
A0A2V7CCS4_9BACT1.610e-5448.17Polyhydroxybutyrate depolymerase n=1 Tax=Candidatu... [more]
A0A534V505_9DELT2.550e-5346.54Polyhydroxybutyrate depolymerase n=1 Tax=Deltaprot... [more]
A0A1G0FM83_9GAMM3.620e-5347.30Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A2D6BJ04_9DELT8.880e-5347.09Polyhydroxybutyrate depolymerase n=1 Tax=Deltaprot... [more]
A0A317H7Z7_9PROT2.030e-5250.00Polyhydroxybutyrate depolymerase n=1 Tax=Proteobac... [more]
A0A353VEA9_9BACT2.210e-5149.77Polyhydroxybutyrate depolymerase n=2 Tax=unclassif... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83128contigM-pyrifera_M_contig83128:15..689 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score186.0
Seed ortholog evalue1.9e-44
Seed eggNOG ortholog946362.XP_004989089.1
KEGG koko:K09252
Hectar predicted targeting categoryother localisation
EggNOG free text desc.xylan catabolic process
EggNOG OGs2SBTI@2759,39SMX@33154,COG3509@1
EC3.1.1.73
COG Functional cat.Q
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size675
Cds size675
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816738.189532-CDS-M-pyrifera_M_contig83128:14..6891622816738.189532-CDS-M-pyrifera_M_contig83128:14..689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83128 15..689 +
1692278149.160997-CDS-M-pyrifera_M_contig83128:14..6891692278149.160997-CDS-M-pyrifera_M_contig83128:14..689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83128 15..689 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83128.19417.1prot_M-pyrifera_M_contig83128.19417.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83128 15..689 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83128.19417.1

>prot_M-pyrifera_M_contig83128.19417.1 ID=prot_M-pyrifera_M_contig83128.19417.1|Name=mRNA_M-pyrifera_M_contig83128.19417.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=225bp
ETLLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATG
FSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIH
SVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLD
SRTDETGHSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVC
GPATFVMNATKEVWSYFLSHPRSC*
back to top

mRNA from alignment at M-pyrifera_M_contig83128:15..689+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83128.19417.1 ID=mRNA_M-pyrifera_M_contig83128.19417.1|Name=mRNA_M-pyrifera_M_contig83128.19417.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=675bp|location=Sequence derived from alignment at M-pyrifera_M_contig83128:15..689+ (Macrocystis pyrifera P11B4 male)
GAGACCCTGTTGACTTGGAATGCAGGTCCAGGAAAGTGTGGCCATGCGGC CAAAACCAACGCAGACGATGTTGGCTTCATTCTTGCCTGTGTAGAACACT TCTCTCAGAGCATTACTGCCGTGGACCCATTGAGAGTCTACGCCACCGGT TTCTCTAACGGAGCCATGATGTGCTGCAGGCTTGCAGCTGATACTGCTGC TTCGAGGGTGTTTGCTGCAGTCGCCCCAGTGAACGGCTGCTGTATTGTCG ACGAGGCCTCGTTCTCTCCTTCTCGACCTGTGGGCATGCTCTACATTCAC AGCGTGGACGACCCACGAGCTCTGTACAATGGTGGGCTTGGGCCCCCATT TCCGATGACCAACAAGCGAGTTATGCATGACAACGTGGACACCTTCCTGG CCCAGAGAATTCGGGCAAATGGGTGCCAGGGGCCACCTCGTCAGCTGGAC TCTCGCACAGACGAAACGGGGCACTCTGCCACGCTTCTGGGCTGGTTTGG AGGTCCACCTGGTGCTGAAGTTCTCCACTGGAAGCTCACAGGTGGTGGCC ATGCCTGGCCAGGTGTTGCGCACAGGGGAAAGTTGCCTGAACGGGTGTGC GGACCCGCTACTTTCGTCATGAACGCAACGAAGGAAGTGTGGTCGTATTT TTTGAGTCACCCGAGGTCTTGCTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig83128:15..689+

>mRNA_M-pyrifera_M_contig83128.19417.1 ID=mRNA_M-pyrifera_M_contig83128.19417.1|Name=mRNA_M-pyrifera_M_contig83128.19417.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1350bp|location=Sequence derived from alignment at M-pyrifera_M_contig83128:15..689+ (Macrocystis pyrifera P11B4 male)
GAGACCCTGTTGACTTGGAATGCAGGTCCAGGAAAGTGTGGCCATGCGGC
CAAAACCAACGCAGACGATGTTGGCTTCATTCTTGCCTGTGTAGAACACT
TCTCTCAGAGCATTACTGCCGTGGACCCATTGAGAGTCTACGCCACCGGT
TTCTCTAACGGAGCCATGATGTGCTGCAGGCTTGCAGCTGATACTGCTGC
TTCGAGGGTGTTTGCTGCAGTCGCCCCAGTGAACGGCTGCTGTATTGTCG
ACGAGGCCTCGTTCTCTCCTTCTCGACCTGTGGGCATGCTCTACATTCAC
AGCGTGGACGACCCACGAGCTCTGTACAATGGTGGGCTTGGGCCCCCATT
TCCGATGACCAACAAGCGAGTTATGCATGACAACGTGGACACCTTCCTGG
CCCAGAGAATTCGGGCAAATGGGTGCCAGGGGCCACCTCGTCAGCTGGAC
TCTCGCACAGACGAAACGGGGCACTCTGCCACGCTTCTGGGCTGGTTTGG
AGGTCCACCTGGTGCTGAAGTTCTCCACTGGAAGCTCACAGGTGGTGGCC
ATGCCTGGCCAGGTGTTGCGCACAGGGGAAAGTTGCCTGAACGGGTGTGC
GGACCCGCTACTTTCGTCATGAACGCAACGAAGGAAGTGTGGTCGTATTT
TTTGAGTCACCCGAGGTCTTGCTGAGAGACCCTGTTGACTTGGAATGCAG
GTCCAGGAAAGTGTGGCCATGCGGCCAAAACCAACGCAGACGATGTTGGC
TTCATTCTTGCCTGTGTAGAACACTTCTCTCAGAGCATTACTGCCGTGGA
CCCATTGAGAGTCTACGCCACCGGTTTCTCTAACGGAGCCATGATGTGCT
GCAGGCTTGCAGCTGATACTGCTGCTTCGAGGGTGTTTGCTGCAGTCGCC
CCAGTGAACGGCTGCTGTATTGTCGACGAGGCCTCGTTCTCTCCTTCTCG
ACCTGTGGGCATGCTCTACATTCACAGCGTGGACGACCCACGAGCTCTGT
ACAATGGTGGGCTTGGGCCCCCATTTCCGATGACCAACAAGCGAGTTATG
CATGACAACGTGGACACCTTCCTGGCCCAGAGAATTCGGGCAAATGGGTG
CCAGGGGCCACCTCGTCAGCTGGACTCTCGCACAGACGAAACGGGGCACT
CTGCCACGCTTCTGGGCTGGTTTGGAGGTCCACCTGGTGCTGAAGTTCTC
CACTGGAAGCTCACAGGTGGTGGCCATGCCTGGCCAGGTGTTGCGCACAG
GGGAAAGTTGCCTGAACGGGTGTGCGGACCCGCTACTTTCGTCATGAACG
CAACGAAGGAAGTGTGGTCGTATTTTTTGAGTCACCCGAGGTCTTGCTGA
back to top