mRNA_M-pyrifera_M_contig83128.19417.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A7Y5QLB0_9BACT (Prolyl oligopeptidase family serine peptidase n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A7Y5QLB0_9BACT) HSP 1 Score: 201 bits (512), Expect = 1.730e-60 Identity = 116/217 (53.46%), Postives = 136/217 (62.67%), Query Frame = 1 Query: 7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDETG---HSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSY 648 LLTWNAG G CG+A DDVG+ +A VE + T++D RVYATG SNG +M RLAA+ A AA+APV G +D SF+P R V ++ IHSVDDPRALY GGLGPPFP T+ RVMH V L + I ANGC P LD R + G H A LL W G GAEV HWKLTG GHAWPG A R E + GP T V+ A EVW++ Sbjct: 110 LLTWNAGDGCCGYALNNGVDDVGYAVAVVEDLGRR-TSIDRRRVYATGHSNGGIMSHRLAAERAG--FVAAIAPVAGS--LDLRSFAPVRAVPVMQIHSVDDPRALYEGGLGPPFPGTDNRVMHQPVQAGLDRWIVANGCATRPDTLDRRAESHGGATHRAMLLAWRGCRGGAEVRHWKLTGPGHAWPGDA-RPPGGEAISGPQTTVVRAADEVWAF 320
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A7C3JM90_9DELT (Polyhydroxybutyrate depolymerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3JM90_9DELT) HSP 1 Score: 193 bits (491), Expect = 2.280e-57 Identity = 106/217 (48.85%), Postives = 139/217 (64.06%), Query Frame = 1 Query: 7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDET--GHSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSYF 651 LLTWNAG CG+AA + DDVGF+ A + + ++ +D RVYATG SNGAM RLAA AS + AAVAPV G ++ + + SR V ++++HSVDDPRALY GGLGPPFPMTN RV H +D + + NGC PR + R+D GH+AT + GAEV+ WKLTG GH WPG + K ER+ GP T +++A KE+W++F Sbjct: 111 LLTWNAG-NCCGYAALNSVDDVGFVRALLAKLADRLS-IDRRRVYATGLSNGAMTAHRLAAQ--ASDLIAAVAPVAGGMVLP--TIASSRAVPVMHVHSVDDPRALYTGGLGPPFPMTNSRVFHPEIDRMITRWASHNGCAADPRVAERRSDRNRRGHTATKYVYSNCRDGAEVVLWKLTGAGHVWPG--GKQKFMERLLGPGTDIIDANKEMWNFF 319
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A2V6ZZ51_9BACT (Polyhydroxybutyrate depolymerase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6ZZ51_9BACT) HSP 1 Score: 189 bits (481), Expect = 5.800e-56 Identity = 109/218 (50.00%), Postives = 135/218 (61.93%), Query Frame = 1 Query: 7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDET----GHSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSY 648 LLTWNAG G CG+AA N DDVGF +A + +++++ +DP RVYATG SNG MM RLA D AS AA+APV G + ASF P+RPV +L+IHSVDDP ALY GGLGPPFP T RV H V+ L + + C PR ++ RT + H+ATLL W G EV WKLT GH WPG LPE++ GP T ++A EVW + Sbjct: 92 LLTWNAG-GCCGYAAAQNVDDVGFTVAVLRDVARNVS-IDPARVYATGHSNGGMMTYRLAID--ASERVAAIAPVAGA--MQAASFPPARPVAVLHIHSVDDPGALYAGGLGPPFPGTQSRVTHRAVEPELRRWAAQDRCPAEPRTVEQRTTPSRGGPDHTATLLVWAPCAGGTEVQLWKLTVAGHGWPG--GHVLLPEKIMGPETVTIDAALEVWRF 301
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A1F7LCB1_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium GWA2_70_23 TaxID=1802095 RepID=A0A1F7LCB1_9BACT) HSP 1 Score: 187 bits (474), Expect = 4.550e-55 Identity = 108/214 (50.47%), Postives = 138/214 (64.49%), Query Frame = 1 Query: 7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTD-----ETGHSATLLGWFGGP--PGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNA 627 LLTWNAG CG+A+ T DDV F++A + ++ + +DP RVYATG SNGAM+ RLA + A A +AP+ G + D SF P+RPV +L+IHSVDDPRALY GGLGPPFP T+ R+ H V+ LA+ + +GC G PR + RT + GH+ATLL GP GAEV WKLTG GH WPG +LPER+ GP T V++A Sbjct: 98 LLTWNAG-SCCGYASDTKVDDVAFVVALLRDLARGLP-LDPTRVYATGHSNGAMLAYRLAVE--APERIATIAPIAGMMVAD--SFLPARPVPLLHIHSVDDPRALYAGGLGPPFPFTSTRIGHRAVEPELARWVAHDGCPGEPRVAEHRTAPAGGRDAGHTATLL--VRGPCAGGAEVGLWKLTGAGHGWPG--EPSQLPERIMGPDTNVISA 301
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A2V7CCS4_9BACT (Polyhydroxybutyrate depolymerase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7CCS4_9BACT) HSP 1 Score: 183 bits (465), Expect = 1.610e-54 Identity = 105/218 (48.17%), Postives = 131/218 (60.09%), Query Frame = 1 Query: 7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDET----GHSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSY 648 LLTWNAG G CG+AA N DDVGF +A + ++++ VDP RVYATG SNGAMM R+A + AS AA+APV G + F P PV +L+IHSVDDPRALY GGLGPPFP T RV+H V+ + + + + C PR + RT H+A L W G EV W+LTG GH WPG R LPE+V GP T ++A E W + Sbjct: 15 LLTWNAG-GCCGYAAAQNVDDVGFAVAVLRDVARNVL-VDPTRVYATGHSNGAMMAYRMAIE--ASERIAAIAPVAGAMQTER--FPPPSPVPVLHIHSVDDPRALYTGGLGPPFPGTQSRVVHRAVEGEIRRWVAHDRCPSEPRMAEQRTAPAPGGPDHTAARLVWAPCAAGTEVQLWRLTGAGHGWPGSHVR--LPEKVMGPDTVTIDAALEAWRF 224
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A534V505_9DELT (Polyhydroxybutyrate depolymerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534V505_9DELT) HSP 1 Score: 184 bits (466), Expect = 2.550e-53 Identity = 101/217 (46.54%), Postives = 136/217 (62.67%), Query Frame = 1 Query: 7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDET--GHSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSYF 651 LLTWNAG C ++ N DDVGFI A V ++ I +D RVYATG SNG MM RLAA+ A+ + AA+APV G + + + +R V ++++HSVDDPRALY GGLGPPFPMT V H N+D +A+ ++ +GC P + R D GH+AT + GAEV WKLTG GH WPG + K ER+ GP+T +++A E+W++F Sbjct: 137 LLTWNAGTC-CAYSVINNVDDVGFIRALVADLAERIP-IDRRRVYATGLSNGGMMAHRLAAE--AADLIAAIAPVAGGMVFP--AITAARSVPVMHLHSVDDPRALYTGGLGPPFPMTKSHVFHPNIDQMIARWVKHDGCAAQPAVTERRADSDTRGHTATRYVYSNCRDGAEVSLWKLTGAGHVWPG--GKQKFMERLLGPSTDIIDANTEMWNFF 345
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A1G0FM83_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RBG_16_66_13 TaxID=1798267 RepID=A0A1G0FM83_9GAMM) HSP 1 Score: 182 bits (463), Expect = 3.620e-53 Identity = 105/222 (47.30%), Postives = 135/222 (60.81%), Query Frame = 1 Query: 1 ETLLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDETGHSATLLG---WFGGP--PGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSYF 651 E LLTWNAG G CG+A + DDVGF+ A ++ + +T +D R+YATG SNGAMM RL + A V +A+APV G VD SF P R + +L+IHSVDDPRALY GG GPPFP TN+ V H V+T L N C P DSR+ E+G +L W GP GAE+ WKL+G GH WPG + V GP+T V++A +E+W++F Sbjct: 104 ERLLTWNAG-GCCGYAQDESIDDVGFVRALLDDL-EDVTHIDRARIYATGLSNGAMMAYRLGME--AGDVISAIAPVAGAMRVD--SFEPVRQLPILHIHSVDDPRALYGGGTGPPFPFTNRTVDHVPVETVLELWAEYNACPSEPTLADSRSTESGAETSLQTAELWNYGPCESGAEIALWKLSGAGHVWPG--GDPEFLTNVLGPSTAVIDANREMWAFF 317
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A2D6BJ04_9DELT (Polyhydroxybutyrate depolymerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BJ04_9DELT) HSP 1 Score: 182 bits (462), Expect = 8.880e-53 Identity = 105/223 (47.09%), Postives = 132/223 (59.19%), Query Frame = 1 Query: 7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPR---QLDSRTDETGHSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSYFLSHPR 666 LLTWN G CG A + ADDVGF LA ++ + S+ VD RVYATG SNGAMM RLAA+ A AA+APV G +D + PS P+ +++ HSVDD RALY GGLGPPFP T RV H V+T LA A C P +L+ D+ GH+A W G EV+ WKL+G GH WPG A KL R+ G T +++A E+W +F +H R Sbjct: 122 LLTWNVGHC-CGLALERKADDVGFSLAVLDDLA-SLVPVDSTRVYATGLSNGAMMAMRLAAE--APERIAAIAPVAGAAPLDR--YPPSAPMPVMHFHSVDDERALYEGGLGPPFPFTRSRVDHIGVETTLAAWREAASCPAEPEVAARLEGEGDDAGHTAQRYRWGACEGGTEVILWKLSGAGHVWPGAA---KLRPRLLGAPTKIVDANTEMWRFFQAHRR 335
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A317H7Z7_9PROT (Polyhydroxybutyrate depolymerase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317H7Z7_9PROT) HSP 1 Score: 181 bits (458), Expect = 2.030e-52 Identity = 111/222 (50.00%), Postives = 135/222 (60.81%), Query Frame = 1 Query: 7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRTDETG----HSATLLGWFGGPPGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSYFLSH 660 LLTWNAG CG A K N DDVGF A +E +Q T +D R+YATG SNGAMM RLAA+ AS + AA+APV G +VD F PSRP+ +L+IHSVDDPRA Y GGLGP FP+TN RVMH V+ +A+ +GC PR D TG H+AT + + G V+ WKLTG GH WPG LP V G T V++A E+W +F H Sbjct: 111 LLTWNAGTC-CGSAQKENVDDVGFARAVIEDLTQR-TPIDRNRIYATGLSNGAMMAYRLAAE--ASDLIAAIAPVAGGEMVD---FHPSRPMAILHIHSVDDPRAQYAGGLGPSFPLTNSRVMHPAVEQTIARWATFDGCPRQPR-ADVTLRGTGKTATHTATRITYAPCKAGTTVILWKLTGSGHVWPG-GRLDYLPG-VLGAGTDVIDANDEMWKFFSRH 322
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Match: A0A353VEA9_9BACT (Polyhydroxybutyrate depolymerase n=2 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A353VEA9_9BACT) HSP 1 Score: 178 bits (451), Expect = 2.210e-51 Identity = 109/219 (49.77%), Postives = 133/219 (60.73%), Query Frame = 1 Query: 7 LLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGFSNGAMMCCRLAADTAASRVFAAVAPVNGCCIVDEASFSPSRPVGMLYIHSVDDPRALYNGGLGPPFPMTNKRVMHDNVDTFLAQRIRANGCQGPPRQLDSRT---DETGHSATLLGWFGGP--PGAEVLHWKLTGGGHAWPGVAHRGKLPERVCGPATFVMNATKEVWSY 648 LLTWNAG CG A N +DVGF LA V + +D RVYATG SNGAMM R+A + AA R+ AA+APV G + D F+P+ PV +L+IHSVDDPRALY GGLGPPFP+T+ RV H V+ LA+ I GC + ++ R D G T W GP GA V WKLTG GH WPG LPER+ GP T V++A +EVW + Sbjct: 106 LLTWNAGEC-CGFARDANVNDVGFALALVAALGADLP-LDRRRVYATGHSNGAMMAYRVALE-AAERI-AAIAPVAGMMVADP--FAPAAPVPVLHIHSVDDPRALYAGGLGPPFPLTSVRVAHRPVEAGLARWIARAGCPAAGQVVEERATPPDARGRRHTATRWRWGPCASGAGVELWKLTGAGHGWPGGP--SPLPERLTGPDTTVISAAEEVWRF 316 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83128.19417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig83128.19417.1 >prot_M-pyrifera_M_contig83128.19417.1 ID=prot_M-pyrifera_M_contig83128.19417.1|Name=mRNA_M-pyrifera_M_contig83128.19417.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=225bp ETLLTWNAGPGKCGHAAKTNADDVGFILACVEHFSQSITAVDPLRVYATGback to top mRNA from alignment at M-pyrifera_M_contig83128:15..689+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig83128.19417.1 ID=mRNA_M-pyrifera_M_contig83128.19417.1|Name=mRNA_M-pyrifera_M_contig83128.19417.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=675bp|location=Sequence derived from alignment at M-pyrifera_M_contig83128:15..689+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig83128:15..689+ >mRNA_M-pyrifera_M_contig83128.19417.1 ID=mRNA_M-pyrifera_M_contig83128.19417.1|Name=mRNA_M-pyrifera_M_contig83128.19417.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1350bp|location=Sequence derived from alignment at M-pyrifera_M_contig83128:15..689+ (Macrocystis pyrifera P11B4 male)back to top |