mRNA_M-pyrifera_M_contig82808.19351.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82808.19351.1 vs. uniprot
Match: A0A1I3ZMM6_9HYPH (Periplasmic serine endoprotease DegP-like n=1 Tax=Methylocapsa palsarum TaxID=1612308 RepID=A0A1I3ZMM6_9HYPH) HSP 1 Score: 52.8 bits (125), Expect = 6.070e-6 Identity = 31/78 (39.74%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 1 LGVRAVDASTEDQTRLGRPGLVGAAVTEVVENSPASEAGLEVGAVIVTLDDQRITGSRLLIDTVRAASPNAKHTIAYY 234 +GV+ +TE LG GA V + NSPA+EAGL+ G VI+ +D +RI G R L V A P K + Y+ Sbjct: 307 IGVQIQPVTTEVADSLGLKAAKGALVADAQANSPAAEAGLKSGDVILGIDGERIDGPRELARKVAALGPGKKADLIYW 384
BLAST of mRNA_M-pyrifera_M_contig82808.19351.1 vs. uniprot
Match: A0A2V2CG99_9FIRM (Peptidase S1 n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A2V2CG99_9FIRM) HSP 1 Score: 52.4 bits (124), Expect = 8.220e-6 Identity = 32/78 (41.03%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 1 LGVRAVDASTEDQTRLGRPGLVGAAVTEVVENSPASEAGLEVGAVIVTLDDQRITGSRLLIDTVRAASPNAKHTIAYY 234 +GV + S+E Q +LG P GAAV EVV +SPA +GL+V +I ++ ITGS L++TV++A+ + T++ Y Sbjct: 330 VGVSVTNVSSESQ-QLGLP--QGAAVAEVVADSPAEASGLQVNDIITAVNGTAITGSTDLVNTVKSAAIGDELTLSVY 404
BLAST of mRNA_M-pyrifera_M_contig82808.19351.1 vs. uniprot
Match: A0A7V0U1E0_9PROT (Periplasmic serine endoprotease DegP-like n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7V0U1E0_9PROT) HSP 1 Score: 52.0 bits (123), Expect = 1.130e-5 Identity = 34/91 (37.36%), Postives = 48/91 (52.75%), Query Frame = 1 Query: 1 LGVRAVDASTEDQTRLGRPGLVGAAVTEVVENSPASEAGLEVGAVIVTLDDQRITGSRLLIDTVRAASPNAKHTIAYYDPSGSLVQTDVAL 273 LGV + + E G GA V+EVVE+SPAS +GL+VG +I+ +D ++I R L V A P K + G +V+T V L Sbjct: 280 LGVHVQEVTEELAASFGLEEKSGAVVSEVVEDSPASRSGLQVGDIILEVDGEKIEEMRYLPRLVAAKKPGTKVELKLLR-QGKIVKTKVVL 369
BLAST of mRNA_M-pyrifera_M_contig82808.19351.1 vs. uniprot
Match: A0A3M1SV22_9BACT (PDZ domain-containing protein n=2 Tax=Acidobacteria TaxID=57723 RepID=A0A3M1SV22_9BACT) HSP 1 Score: 51.2 bits (121), Expect = 1.800e-5 Identity = 25/70 (35.71%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 1 LGVRAVDASTEDQTRLGRPGLVGAAVTEVVENSPASEAGLEVGAVIVTLDDQRITGSRLLIDTVRAASPN 210 LG++ D + ++ ++ G + G AV +VVENSPA++AGL+ G VIV +++ +T R L + +P+ Sbjct: 35 LGIQMTDITKDNYSKYGLNSVQGVAVEKVVENSPAAQAGLKAGDVIVKFNNEEVTSVRKLKRLISEVAPD 104
BLAST of mRNA_M-pyrifera_M_contig82808.19351.1 vs. uniprot
Match: A0A3M2EXR1_9BACT (Do family serine endopeptidase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A3M2EXR1_9BACT) HSP 1 Score: 51.2 bits (121), Expect = 2.130e-5 Identity = 31/78 (39.74%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 1 LGVRAVDASTEDQTRLGRPGLVGAAVTEVVENSPASEAGLEVGAVIVTLDDQRITGSRLLIDTVRAASPNAKHTIAYY 234 LGV + + E + +LG P GA VTEV E +PA EA LE G VIV D Q+I + L++ V K + +Y Sbjct: 353 LGVSIQNLNEELRKKLGLPDPQGALVTEVKEGTPADEAELEPGDVIVEWDGQKIRNTSQLLEAVSTTEIGRKVKVVFY 430
BLAST of mRNA_M-pyrifera_M_contig82808.19351.1 vs. uniprot
Match: A0A6N2DER5_9ACTN (PDZ domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DER5_9ACTN) HSP 1 Score: 50.8 bits (120), Expect = 2.790e-5 Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 1 Query: 19 DASTEDQTRLG------RPGLVGAAVTEVVENSPASEAGLEVGAVIVTLDDQRITGSRLLIDTVRAASPNAKHTIA 228 D +T D+ LG G G V+EV +SPA+ AGL++G ++V +DD ITG+ L+ T+R SP TI+ Sbjct: 270 DGTTRDEGFLGVGLENRSDGGQGTIVSEVRSDSPAAAAGLQLGDIVVAIDDAEITGTLSLVATIRDRSPGDTITIS 345
BLAST of mRNA_M-pyrifera_M_contig82808.19351.1 vs. uniprot
Match: A0A7V0ZIA4_9BACT (DegQ family serine endoprotease n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7V0ZIA4_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 2.870e-5 Identity = 22/53 (41.51%), Postives = 38/53 (71.70%), Query Frame = 1 Query: 67 GAAVTEVVENSPASEAGLEVGAVIVTLDDQRITGSRLLIDTVRAASPNAKHTI 225 GA + +VV+NSPA +AG+E+G +I + D + ITGS L + V +++P ++T+ Sbjct: 283 GALIGDVVKNSPAEKAGIEIGDIITSFDSKNITGSSHLKNVVSSSTPGKRYTV 335
BLAST of mRNA_M-pyrifera_M_contig82808.19351.1 vs. uniprot
Match: A0A7T1F363_9BACT (Serine protease HtrA n=2 Tax=Atribacterota TaxID=67818 RepID=A0A7T1F363_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 2.870e-5 Identity = 25/69 (36.23%), Postives = 43/69 (62.32%), Query Frame = 1 Query: 1 LGVRAVDASTEDQTRLGRPGLVGAAVTEVVENSPASEAGLEVGAVIVTLDDQRITGSRLLIDTVRAASP 207 LGV + + E + G G GA V +V+EN PA++A + G +I++++DQ IT ++ L +T+R+ P Sbjct: 263 LGVYIQNVTPEIGKQFGYEGTTGALVADVIENGPAAKASFQRGDIILSVNDQEITDTKQLQNTIRSLKP 331
BLAST of mRNA_M-pyrifera_M_contig82808.19351.1 vs. uniprot
Match: A0A6J7IW74_9ZZZZ (Unannotated protein n=3 Tax=root TaxID=1 RepID=A0A6J7IW74_9ZZZZ) HSP 1 Score: 50.4 bits (119), Expect = 3.790e-5 Identity = 30/89 (33.71%), Postives = 47/89 (52.81%), Query Frame = 1 Query: 1 LGVRAVDASTEDQTRLGRPGLVGAAVTEVVENSPASEAGLEVGAVIVTLDDQRITGSRLLIDTVRAASPNAKHTIAYYDPSGSLVQTDV 267 LGV + D + RLGR G + ++E+ + PA AGLEVG V+V++DD I+ + L+ +R+ TI+Y V T + Sbjct: 265 LGVMSDDLDSITTARLGRSGTI---LSEISADGPADVAGLEVGDVVVSIDDSPISSATSLVVALRSREVGDSVTISYIRDGAQRVTTTI 350
BLAST of mRNA_M-pyrifera_M_contig82808.19351.1 vs. uniprot
Match: UPI0016424B7E (trypsin-like peptidase domain-containing protein n=2 Tax=Nocardioides TaxID=1839 RepID=UPI0016424B7E) HSP 1 Score: 50.4 bits (119), Expect = 3.900e-5 Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 37 QTRLGRPGLVGAAVTEVVENSPASEAGLEVGAVIVTLDDQRITGSRLLIDTVRAASPNAKHTIAY 231 Q + GR GA + EV++++PA+EAGLE G V+V +D +R+T LI ++R P TIA+ Sbjct: 364 QVQTGRRDGTGARIEEVLDDTPAAEAGLEAGDVVVAVDGERVTDGIALIVSIRTHQPG--ETIAF 426 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82808.19351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82808.19351.1 >prot_M-pyrifera_M_contig82808.19351.1 ID=prot_M-pyrifera_M_contig82808.19351.1|Name=mRNA_M-pyrifera_M_contig82808.19351.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp LGVRAVDASTEDQTRLGRPGLVGAAVTEVVENSPASEAGLEVGAVIVTLDback to top mRNA from alignment at M-pyrifera_M_contig82808:590..865- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82808.19351.1 ID=mRNA_M-pyrifera_M_contig82808.19351.1|Name=mRNA_M-pyrifera_M_contig82808.19351.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=276bp|location=Sequence derived from alignment at M-pyrifera_M_contig82808:590..865- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82808:590..865- >mRNA_M-pyrifera_M_contig82808.19351.1 ID=mRNA_M-pyrifera_M_contig82808.19351.1|Name=mRNA_M-pyrifera_M_contig82808.19351.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig82808:590..865- (Macrocystis pyrifera P11B4 male)back to top |