mRNA_M-pyrifera_M_contig82580.19303.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82580.19303.1 vs. uniprot
Match: A0A5A8E7G1_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E7G1_CAFRO) HSP 1 Score: 57.4 bits (137), Expect = 2.720e-8 Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 1 Query: 43 GRTILLAAVLANDVPLVKRLLEADPETIKDRSKLGETALHLAILHGSREMIQVLLERGADINA 231 G T + AV + D V+ LL A P+ + DR++LGET LH+A+ RE++Q+L GAD NA Sbjct: 20 GHTDMHVAVSSGDPARVRELLLARPDAVHDRTRLGETPLHIAVARAPREVVQMLCASGADPNA 82
BLAST of mRNA_M-pyrifera_M_contig82580.19303.1 vs. uniprot
Match: A0A2V9FRB3_9BACT (Uncharacterized protein n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9FRB3_9BACT) HSP 1 Score: 56.6 bits (135), Expect = 5.190e-8 Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 1 Query: 43 GRTILLAAVLANDVPLVKRLLEADPETIKDRSKLGETALHLAILHGSREMIQVLLERGADINA 231 G L AV D+ VK +L+ D E + R + G T LH A L G RE++Q+LL+RGADIN+ Sbjct: 3 GLDKLTKAVKRRDIDQVKTILDEDGELVHVRDEAGATGLHYATLDGLREIVQLLLDRGADINS 65
BLAST of mRNA_M-pyrifera_M_contig82580.19303.1 vs. uniprot
Match: UPI001865172E (KN motif and ankyrin repeat domain-containing protein 3-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001865172E) HSP 1 Score: 58.2 bits (139), Expect = 7.110e-8 Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 1 MVDVEALHPDHQ-RAGRTILLAAVLAN-----DVPLVKRLLEADPETIKDRSKLGETALHLAILHGSREMIQVLLERGADIN 228 ++D H D + RAG T ++ A LA+ D+ +V+RL A K S+ G+TAL LA+ HG +EM+QVLL+ GAD+N Sbjct: 710 LLDTGVCHVDRRNRAGYTAIMLAALASVREEDDMQVVRRLFSAGDVNAK-ASQAGQTALMLAVSHGRQEMVQVLLDCGADVN 790
BLAST of mRNA_M-pyrifera_M_contig82580.19303.1 vs. uniprot
Match: A0A5A8C696_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C696_CAFRO) HSP 1 Score: 57.4 bits (137), Expect = 1.150e-7 Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 1 Query: 43 GRTILLAAVLANDVPLVKRLLEADPETIKDRSKLGETALHLAILHGSREMIQVLLERGADINA 231 G T + AV + D V+ LL A P+ + DR++LGET LH+A+ RE++Q+L GAD NA Sbjct: 20 GHTDMHVAVSSGDPARVRELLLARPDAVHDRTRLGETPLHIAVARAPREVVQMLCASGADPNA 82
BLAST of mRNA_M-pyrifera_M_contig82580.19303.1 vs. uniprot
Match: A0A2V8TV10_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8TV10_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 1.390e-7 Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 55 LLAAVLANDVPLVKRLLEADPETIKDRSKLGETALHLAILHGSREMIQVLLERGADINA 231 L+AAV D+ VK +LE D R + G T LH A LHG R+++++LL++GADIN+ Sbjct: 7 LIAAVKEGDLERVKGILETDDRLANLRDESGATPLHYAALHGHRQIVELLLKQGADINS 65
BLAST of mRNA_M-pyrifera_M_contig82580.19303.1 vs. uniprot
Match: A0A2E8Y6E0_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E8Y6E0_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 1.680e-7 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 43 GRTILLAAVLANDVPLVKRLLE--ADPETIKDRSKLG------ETALHLAILHGSREMIQVLLERGADINAPQTGQ 246 G+T L+ AV AND LVK LLE A+P D+ +G +TALHLA L+G+RE+ ++L+E GADIN Q Sbjct: 153 GQTELMIAVEANDADLVKHLLERNANPNAT-DKVAMGIFGELEQTALHLAALNGNRELCELLVEGGADINQKDKAQ 227
BLAST of mRNA_M-pyrifera_M_contig82580.19303.1 vs. uniprot
Match: A0A015LYR5_RHIIW (Nas6p n=3 Tax=Rhizophagus TaxID=1129544 RepID=A0A015LYR5_RHIIW) HSP 1 Score: 55.1 bits (131), Expect = 4.500e-7 Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 43 GRTILLAAVLANDVPLVKRLLEADPETIKDRSKLGETALHLAILHGSREMIQVLLERGADINAPQTGQDYYTPLH 267 G +L V+ +V +VK+L++ I + KLG A+H A + G++EMI++L E+GA+IN Q D +T LH Sbjct: 99 GTNLLQNFVICGNVQIVKKLIDEYDVKIDYKDKLGREAIHHAAIIGNKEMIELLFEKGANINV-QDNWDKFTSLH 172
BLAST of mRNA_M-pyrifera_M_contig82580.19303.1 vs. uniprot
Match: A0A2M6GN12_9BACT (Uncharacterized protein n=1 Tax=Cytophagales bacterium CG18_big_fil_WC_8_21_14_2_50_42_9 TaxID=1973956 RepID=A0A2M6GN12_9BACT) HSP 1 Score: 53.5 bits (127), Expect = 4.670e-7 Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 1 Query: 55 LLAAVLANDVPLVKRLLEADPETIKD-RSKLGETALHLAILHGSREMIQVLLERGADINAPQTGQDYYTPL 264 +LAAV A + VK LEA P+ +++ + E+ L LA G++EM+++LL +GAD+N P G YTPL Sbjct: 7 ILAAVQAGNTAQVKSALEAQPDLLQNSQGANNESLLGLAAKQGNKEMVELLLAKGADVNKPAAGG--YTPL 75
BLAST of mRNA_M-pyrifera_M_contig82580.19303.1 vs. uniprot
Match: UPI001402D361 (transient receptor potential cation channel subfamily V member 5-like isoform X1 n=2 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001402D361) HSP 1 Score: 55.5 bits (132), Expect = 6.260e-7 Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 10 VEALHP-DHQRAGRTILLAAVLANDVPLVKRLLEADPETIKDRSKLGETALHLAILHGSREMIQVLLERGAD-INAPQTGQDY 252 V LH +R T L +A ANDV ++K+LLE+ ++ +GETALH+A L+ + E +VLLE D +N P T + Y Sbjct: 34 VSKLHVLQEKRITETPLFSAARANDVNVIKKLLESPSVDPFEKGVMGETALHIAALYDNYEFAKVLLEEAPDLVNVPATSELY 116
BLAST of mRNA_M-pyrifera_M_contig82580.19303.1 vs. uniprot
Match: UPI0004198A13 (ankyrin repeat domain-containing protein n=1 Tax=Adhaeribacter aquaticus TaxID=299567 RepID=UPI0004198A13) HSP 1 Score: 52.0 bits (123), Expect = 9.000e-7 Identity = 25/58 (43.10%), Postives = 39/58 (67.24%), Query Frame = 1 Query: 58 LAAVLANDVPLVKRLLEADPETIKDRSKLGETALHLAILHGSREMIQVLLERGADINA 231 + AV + ++ VK LL+ +P+ + + G T LHLA G+ ++I++LLERGADINA Sbjct: 8 IEAVKSGNLEEVKSLLDNEPDIVNTKDNKGYTLLHLAAQEGNGDLIKLLLERGADINA 65 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82580.19303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82580.19303.1 >prot_M-pyrifera_M_contig82580.19303.1 ID=prot_M-pyrifera_M_contig82580.19303.1|Name=mRNA_M-pyrifera_M_contig82580.19303.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp MVDVEALHPDHQRAGRTILLAAVLANDVPLVKRLLEADPETIKDRSKLGEback to top mRNA from alignment at M-pyrifera_M_contig82580:640..906+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82580.19303.1 ID=mRNA_M-pyrifera_M_contig82580.19303.1|Name=mRNA_M-pyrifera_M_contig82580.19303.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=267bp|location=Sequence derived from alignment at M-pyrifera_M_contig82580:640..906+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82580:640..906+ >mRNA_M-pyrifera_M_contig82580.19303.1 ID=mRNA_M-pyrifera_M_contig82580.19303.1|Name=mRNA_M-pyrifera_M_contig82580.19303.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig82580:640..906+ (Macrocystis pyrifera P11B4 male)back to top |