mRNA_M-pyrifera_M_contig82299.19247.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82299.19247.1 vs. uniprot
Match: A0A497U2V1_9BACT (DNA helicase n=1 Tax=bacterium endosymbiont of Escarpia laminata TaxID=1221601 RepID=A0A497U2V1_9BACT) HSP 1 Score: 145 bits (367), Expect = 2.970e-38 Identity = 85/186 (45.70%), Postives = 115/186 (61.83%), Query Frame = 1 Query: 4 LNISRLTRGHGSIAQELDDAY-QANSMSGLRIFVDDDTTSLSGIVARASEWKHQHGIAALFVDYLGLVEVDGNEPRHVKLGQVSRTLKHFLFLLEIPIVAASQFNRESTKEDRRPRLSDLRDSGSIEQDADVVIALNPIADPDSDGRTL-------IELGVLKNRSGMSGWISDSVTFAGKTQRFL 537 LN S L G L DA + +S L I++D DTT+L GI AR +EWK QHGIA VD++GLVE ++ R+ LG++SR+LK L++PI+A SQ NR ++ RRP L+DLRDSG+IEQDADV L+ DG + +E+G+LKNR+G GW+ + TF G+TQ FL Sbjct: 247 LNFSGLAYGDDEECTRLTDAMTEKPPISSLPIYIDTDTTTLGGITARMAEWKRQHGIALCIVDHIGLVEGGDDKTRNDWLGKISRSLKLTAKRLDLPILAVSQLNRSVERDKRRPVLADLRDSGNIEQDADVCAFLHV------DGNAVETTYGLPMEIGLLKNRTGQRGWLPEEFTFDGRTQTFL 426
BLAST of mRNA_M-pyrifera_M_contig82299.19247.1 vs. uniprot
Match: UPI001FF07148 (DnaB-like helicase C-terminal domain-containing protein n=1 Tax=Flagellatimonas centrodinii TaxID=2806210 RepID=UPI001FF07148) HSP 1 Score: 121 bits (304), Expect = 3.480e-29 Identity = 74/176 (42.05%), Postives = 105/176 (59.66%), Query Frame = 1 Query: 10 ISRLTRGHGSIAQELDDAYQANSMSG-LRIFVDDDTTSLSGIVARASEWKHQHGIAALFVDYLGLVEVDGNEPRHVKLGQVSRTLKHFLFLLEIPIVAASQFNRESTKEDRRPRLSDLRDSGSIEQDADVVIALNPIADPDSDGRTLIELGVLKNRSGMSGWISDSVTFAGKTQRF 534 +SRL RG S E+ A A + G + +++D DT +L I ARA+ K +HGI + VD++GLVE R+ ++G +SR+LK L++P++A SQ NR ++RRP L+DLRDSG+IEQDAD+V+ L+ D S R I +G KNR G + W F TQRF Sbjct: 241 LSRLLRGTAS-PDEVSQATDAMTKLGDIPLWIDTDTYNLDAISARATVAKARHGIGWIAVDHMGLVETARMPSRNEQMGLISRSLKQLAKRLDVPVIAVSQLNRSCDTDNRRPGLADLRDSGNIEQDADIVMMLHCDKDDRSKNRRPISIGFPKNRVGPAVWPDADFEFDALTQRF 415
BLAST of mRNA_M-pyrifera_M_contig82299.19247.1 vs. uniprot
Match: UPI00163E2CB6 (replicative DNA helicase n=2 Tax=Burkholderia gladioli TaxID=28095 RepID=UPI00163E2CB6) HSP 1 Score: 108 bits (271), Expect = 2.290e-24 Identity = 72/189 (38.10%), Postives = 110/189 (58.20%), Query Frame = 1 Query: 1 GLNISRLTRGHGSIAQELDDAYQANS-MSGLRIFVDDDTT-SLSGIVARASEWKHQHGIAALFVDYLGLVEVDGNEPRHVKLGQVSRTLKHFLFLLEIPIVAASQFNRE-STKEDRRPRLSDLRDSGSIEQDADVVIAL--NPIADPDSDGRTLIELGVLKNRSGMSGWISDSVTFAGKTQRFLTEPLG 552 G+N+ + G +E A S M+G+ + VDD + SL+ IV+R+ K +HG+A + VDYLGL+ +E +K+G S LK L++P++A +Q NR + ++RP ++DLRDSG+IEQDADV++ L + + PDS R E+ + K R+G +G S V F G+ QRF P G Sbjct: 260 GINLGHILDGRRMTDEEWPRLTHAVSVMAGVTLLVDDTPSLSLAEIVSRSRTVKRKHGLALVIVDYLGLMTGGTDERHDLKIGSYSAGLKGLAKQLDVPVIALAQLNRGVENRPNKRPTMADLRDSGAIEQDADVILMLYRDQVYFPDSPDRGTAEIIIGKQRNGETG--SVRVAFEGEFQRFSDLPAG 446
BLAST of mRNA_M-pyrifera_M_contig82299.19247.1 vs. uniprot
Match: A0A6L5F4G2_9ACTN (Replicative DNA helicase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L5F4G2_9ACTN) HSP 1 Score: 108 bits (270), Expect = 2.860e-24 Identity = 66/152 (43.42%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 94 IFVDDD-TTSLSGIVARASEWKHQHGIAALFVDYLGLVEVDGNEPRHVKLGQVSRTLKHFLFLLEIPIVAASQFNRE-STKEDRRPRLSDLRDSGSIEQDADVVIAL--NPIADP-DSDGRTLIELGVLKNRSGMSGWISDSVTFAGKTQRF 534 IF+DD +++ I A++ K +HG+ + VDYL L++ G E R ++ ++SR LK+ LE+PIVA SQ NR ++ED+RPRLSDLR+SGSIEQDADVV+ + + P D++ R L E+ V K+R+G G + +TF + RF Sbjct: 294 IFIDDSPVVTVTDIRAKSRRLKRRHGLGLVVVDYLQLMQASGRENRQQEIAEISRNLKNLARELEVPIVAVSQLNRSLESREDKRPRLSDLRESGSIEQDADVVMFIYRHEYYHPEDAEARGLAEVAVAKHRAGSVGTVK--MTFLPEFTRF 443
BLAST of mRNA_M-pyrifera_M_contig82299.19247.1 vs. uniprot
Match: A0A383CK35_9ZZZZ (SF4 helicase domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383CK35_9ZZZZ) HSP 1 Score: 101 bits (252), Expect = 1.810e-23 Identity = 60/147 (40.82%), Postives = 93/147 (63.27%), Query Frame = 1 Query: 70 ANSMSGLRIFVDDDTT-SLSGIVARASEWKHQHGIAALFVDYLGLVEVDGNEPRHVKLGQVSRTLKHFLFLLEIPIVAASQFNRES-TKEDRRPRLSDLRDSGSIEQDADVVIAL--NPIADPDSDGRTLIELGVLKNRSGMSGWIS 498 A+ + L I+ DD + +++ I A++ K GI + VDYL L+E + R ++ +SR LK+ L++PI+A SQ NR + +ED+RPRL DLR+SG+IEQDAD+V+ L + DP S+ + E+ ++KNRSG +G IS Sbjct: 32 ASKVHSLPIYFDDASVITVTDIRAKSRRLKSMKGIDLIIVDYLQLMEDSSGDNRQQEIANISRNLKNLAKELDVPIIAVSQLNRAAEAREDKRPRLGDLRESGAIEQDADIVMMLYRDDYYDPASELTGIAEVNIVKNRSGETGKIS 178
BLAST of mRNA_M-pyrifera_M_contig82299.19247.1 vs. uniprot
Match: A0A0U2SHR3_9BURK (DNA helicase n=2 Tax=Herbaspirillum TaxID=963 RepID=A0A0U2SHR3_9BURK) HSP 1 Score: 104 bits (260), Expect = 7.430e-23 Identity = 78/209 (37.32%), Postives = 111/209 (53.11%), Query Frame = 1 Query: 1 GLNISRLTRGHGSIAQELDDA---------YQANSMSGLRIFVDDDTT-SLSGIVARASEWKHQHGIAALFVDYLGLVEVDGNEPRHVKLGQVSRTLKHFLFLLEIPIVAASQFNREST-KEDRRPRLSDLRDSGSIEQDADVVIALN--PIADPDSDG-RTLIELGVLKNRSGMSGWISDSVTFAGKTQRF-----LTEPLGPKRGAW 570 GL++SR I +DDA + + ++ LR +DD SL + RA WK +HG+ + VDYLGL+ E RH ++G SR LK L++ ++A +Q NR+S + DRRP+LSDLRDSG IEQDADVV+ ++ + DP ++ R E V K R+G G I + F G T RF L P++ W Sbjct: 252 GLSLSR-------ILGRIDDADAQAWGAVTHGCSRLNQLRFAIDDTAAISLLELRLRAKAWKRRHGLDLIVVDYLGLMTGGEGEKRHEQIGSYSRGLKALAKELDVTVLALAQLNRKSEDRADRRPQLSDLRDSGEIEQDADVVVLIHRPEMHDPTNEALRGFAEALVRKQRNGALGDIP--LKFKGATSRFEEWAGLIPTTTPQKSGW 451
BLAST of mRNA_M-pyrifera_M_contig82299.19247.1 vs. uniprot
Match: A0A2E5X5T3_9BACT (Replicative DNA helicase n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X5T3_9BACT) HSP 1 Score: 103 bits (257), Expect = 2.020e-22 Identity = 67/172 (38.95%), Postives = 99/172 (57.56%), Query Frame = 1 Query: 70 ANSMSGLRIFVDDDT-TSLSGIVARASEWKHQHGIAALFVDYLGLVEVDGNEPRHVKLGQVSRTLKHFLFLLEIPIVAASQFNRE-STKEDRRPRLSDLRDSGSIEQDADVVIALNPIA--DPDSDGRTLIELGVLKNRSGMSGWISDSVTFAGKTQRF------LTEPLGP 555 A + G R+F+DD S+ + +RA + KHQHG+ + +DYL L+ E R ++ +SR LK LEIP++A SQ +R ++ED+RP+LSDLR+SGSIEQDADVV+ L +P + + L E K R+G +G + + F T RF + EP+ P Sbjct: 293 AGELQGTRLFIDDTPGLSVMALRSRARKIKHQHGLDMVVIDYLQLMSHPKAESRQQEISAISRALKGLARELEIPVIALSQLSRAVESREDKRPQLSDLRESGSIEQDADVVLMLYRAEYYNPTDENKGLAEAICGKQRNGPTGRVK--LQFRASTMRFENREPSMAEPILP 462
BLAST of mRNA_M-pyrifera_M_contig82299.19247.1 vs. uniprot
Match: UPI001906CD84 (replicative DNA helicase n=3 Tax=Burkholderia gladioli TaxID=28095 RepID=UPI001906CD84) HSP 1 Score: 103 bits (257), Expect = 2.080e-22 Identity = 70/189 (37.04%), Postives = 105/189 (55.56%), Query Frame = 1 Query: 1 GLNISRLTRGHGSIAQELDDAYQANSMSGLRIFVDDDTT--SLSGIVARASEWKHQHGIAALFVDYLGLVEVDGNEPRHVKLGQVSRTLKHFLFLLEIPIVAASQFNRE-STKEDRRPRLSDLRDSGSIEQDADVVIAL--NPIADPDSDGRTLIELGVLKNRSGMSGWISDSVTFAGKTQRFLTEPLG 552 G+N+ + G +E A S+ + DDT SL+ IV+R+ K +HG+ + VDYLGL+ +E +K+G S LK L++P++A +Q NR + ++RP ++DLRDSG+IEQDADV++ L + + PDS R E+ V K R+G +G S V F G+ QRF P G Sbjct: 261 GINLGHVLDGRRMTDEEWPRLTHAVSVMAEMPMLVDDTPGLSLAEIVSRSRTVKRKHGLELIVVDYLGLMTGGTDERHDLKIGSYSAGLKGLAKQLDVPVIALAQLNRGVENRPNKRPTMADLRDSGAIEQDADVILMLYRDQVYHPDSTDRGTAEIIVGKQRNGETG--SVRVAFEGEFQRFSDLPAG 447
BLAST of mRNA_M-pyrifera_M_contig82299.19247.1 vs. uniprot
Match: W0V8C2_9BURK (DNA helicase n=2 Tax=Janthinobacterium agaricidamnosum TaxID=55508 RepID=W0V8C2_9BURK) HSP 1 Score: 103 bits (256), Expect = 2.770e-22 Identity = 66/153 (43.14%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 97 FVDDDTTSLSGIVAR--ASEWKHQHGIAALFVDYLGLVEVDGNEPRHVKLGQVSRTLKHFLFLLEIPIVAASQFNRES-TKEDRRPRLSDLRDSGSIEQDADVVIALN--PIADPDSDG-RTLIELGVLKNRSGMSGWISDSVTFAGKTQRFL 537 F DDT +++ + R A WK +HG+ + VDY+GL+ + RH ++G SR+LK L + I+A +Q NR+S + D+RP+LSDLRDSG IEQDAD+VI ++ + PDS + E+ V KNRSG G I+ + F G T RFL Sbjct: 288 FAIDDTAAITMLDLRMKAKAWKRKHGLGVIIVDYIGLMTGGDGDKRHEQIGYYSRSLKALAKELGVAIIALAQLNRQSEARTDKRPQLSDLRDSGEIEQDADIVILVHRPEMHHPDSPHLKGWAEVMVRKNRSGSLGTIN--MQFDGPTCRFL 438
BLAST of mRNA_M-pyrifera_M_contig82299.19247.1 vs. uniprot
Match: UPI0018A0CF5A (replicative DNA helicase n=4 Tax=Clostridium paraputrificum TaxID=29363 RepID=UPI0018A0CF5A) HSP 1 Score: 102 bits (254), Expect = 4.450e-22 Identity = 69/170 (40.59%), Postives = 99/170 (58.24%), Query Frame = 1 Query: 70 ANSMSGLRIFVDDDTTSLSGIVARASEWKHQHGIAALFVDYLGLVEV-DGNEPRHVKLGQVSRTLKHFLFLLEIPIVAASQFNRE-STKEDRRPRLSDLRDSGSIEQDADVVIAL--NPIADPDSDGRTLIELGVLKNRSGMS-----GWISDSVTFAGKTQRFLTEPLG 552 AN ++ +IF+DD +T+LS I A+ K + G+ + +DYL L+E+ D R ++ ++SR LK LEI IVA SQ +R + D RP LSDLR+SGSIEQDADV+ L + + +S+ R + EL + KNR+G + GWI G+ QRF T G Sbjct: 274 ANVLAKRKIFIDDKSTNLSDIKAKCRSLKVKEGLDVVIIDYLQLIEISDKTNSREQEIAKISRELKKLAKKLEITIVALSQLSRAPEQRTDHRPVLSDLRESGSIEQDADVIFMLYRDEYYNKESEERNIAELIINKNRNGETKTIKLGWI-------GQYQRFATLDRG 436 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82299.19247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82299.19247.1 >prot_M-pyrifera_M_contig82299.19247.1 ID=prot_M-pyrifera_M_contig82299.19247.1|Name=mRNA_M-pyrifera_M_contig82299.19247.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=199bp GLNISRLTRGHGSIAQELDDAYQANSMSGLRIFVDDDTTSLSGIVARASEback to top mRNA from alignment at M-pyrifera_M_contig82299:27..912- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82299.19247.1 ID=mRNA_M-pyrifera_M_contig82299.19247.1|Name=mRNA_M-pyrifera_M_contig82299.19247.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=886bp|location=Sequence derived from alignment at M-pyrifera_M_contig82299:27..912- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82299:27..912- >mRNA_M-pyrifera_M_contig82299.19247.1 ID=mRNA_M-pyrifera_M_contig82299.19247.1|Name=mRNA_M-pyrifera_M_contig82299.19247.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1194bp|location=Sequence derived from alignment at M-pyrifera_M_contig82299:27..912- (Macrocystis pyrifera P11B4 male)back to top |