mRNA_M-pyrifera_M_contig81758.19139.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81758.19139.1 vs. uniprot
Match: UPI00199DA422 (Fibronectin type III domain-containing protein n=1 Tax=Roseiflexaceae bacterium TaxID=2762507 RepID=UPI00199DA422) HSP 1 Score: 124 bits (310), Expect = 3.990e-29 Identity = 72/195 (36.92%), Postives = 102/195 (52.31%), Query Frame = 1 Query: 4 WAERRHLQRVFEIGQAFEREFGAGSIGTRVFPVYASWSIMPDRFNETLQWFEAWKGAGSAPKYLTHVASTSYFGYNDTKNLPPKATVSQIVAGFLNSSTHVPQDLQQIDAVAKAFGLKHASYEGSMGYRVGDETDVGNVIEAVRAPEATEII-----KNWFTNYGKFYDVLHQFSFSGMYSQYGQWGATDLLEDL 573 WA RRH +R +IG AF+ EFGAG++G+++ PV + W+I P ++ + L W A GA S Y+ +A SYF + + +V QI+A SS D Q A +G+KH YEG GD T + N I A R P ++I +NWF G D+ F+ S YS+YG WG TD + +L Sbjct: 362 WARRRHAKRTRDIGLAFQSEFGAGTLGSKLRPVLSHWTIQPQQYQQMLSWLNATYGAPSG--YIYAIAGASYFNCDPACST---GSVDQIIAALQASSDGARADRQAHTTTANTWGIKHFMYEGGPDSGGGDATTIANKIRAHRDPRMKDLIIRDIEQNWFGVGG---DLFMYFTLSSAYSRYGMWGITDDITNL 548
BLAST of mRNA_M-pyrifera_M_contig81758.19139.1 vs. uniprot
Match: A0A3D9Q9N5_9BACL (S-layer family protein n=1 Tax=Paenibacillus taihuensis TaxID=1156355 RepID=A0A3D9Q9N5_9BACL) HSP 1 Score: 98.6 bits (244), Expect = 2.570e-20 Identity = 62/206 (30.10%), Postives = 102/206 (49.51%), Query Frame = 1 Query: 4 WAERRHLQRVFEIGQAFEREFGAGSIGTRVFPVYASWSIMPDRFNETLQWFEAWKGAGSAPKYLTHVASTSYFGYNDTKNLPPKATVSQIVAGFLNSSTHVPQDLQQIDAVAKAFGLKHASYEGSMGYRVGDETDVGNVIEAVRAPEATEIIK-----NWFTNYGKFYDVLHQFSFSGMYSQYGQWGAT-DLLEDLTTPKWKGFTT 603 W R QR+ EIG+ F+ EFG ++ TRV PV + ++I+PD++ + L W K G +Y +AS YF N V + +++ + ++ ++A +GLK +YEG G +V N I A R+ +++K N+ G D+ F+ S Y++YG WGAT D+ + L TPK++ T+ Sbjct: 591 WTRHRIAQRLIEIGRQFQSEFGEDALNTRVRPVLSWFAIIPDQYEDMLNWVS--KVYGDPKQYFYAIASAPYFNSNAAGEAASATEVLTAMQADSANASKPDGNKVKLISLADQYGLKSFTYEGGPDSGGGSTVNVDNRIAAHRSERMGDLVKYDVGNNFLAQDG---DMFMYFTLSSGYNRYGMWGATEDIFDGLNTPKYEALTS 791
BLAST of mRNA_M-pyrifera_M_contig81758.19139.1 vs. uniprot
Match: A0A1I6VM36_9BACL (Carbohydrate binding domain-containing protein n=3 Tax=Paenibacillus TaxID=44249 RepID=A0A1I6VM36_9BACL) HSP 1 Score: 95.1 bits (235), Expect = 4.070e-19 Identity = 61/209 (29.19%), Postives = 105/209 (50.24%), Query Frame = 1 Query: 4 WAERRHLQRVFEIGQAFEREFGAGSIGTRVFPVYASWSIMPDRFNETLQWFEAWKGAGSAPKYLTHVASTSYFGYNDTKNLPPKATVSQIVAGFLNSSTHVP---QDLQQIDAVAKAFGLKHASYEGSMGYRVGDETDVGNVIEAVRAPEATEIIK-----NWFTNYGKFYDVLHQFSFSGMYSQYGQWGAT-DLLEDLTTPKWKGFTT 603 W R QR+ EIGQ F+ FG ++ TRV PV + ++I+PD++ + L W + G Y +AS YF + + A+ ++++ S + Q++ +A +GLK +YEG G +V N I A R+ +++K N+ G D+ F+ + Y++YG WGA+ D+L++L TPK++ T+ Sbjct: 589 WTRHRIAQRLIEIGQQFQTVFGEDALNTRVRPVLSWFAIIPDQYEDMLNWVS--QTYGDPKNYFYAIASAPYFNSSAASDA---ASTTEVLTAMQEDSKRFSSPDETKQELIGLADQYGLKSYTYEGGPDSGGGSTINVENRIAAHRSERMGDLVKYDVGNNFLDQNG---DMFMYFTLTSGYNRYGMWGASEDILDNLDTPKYEALTS 789
BLAST of mRNA_M-pyrifera_M_contig81758.19139.1 vs. uniprot
Match: A0A7X4YPS5_9BACL (Uncharacterized protein n=1 Tax=Paenibacillus sacheonensis TaxID=742054 RepID=A0A7X4YPS5_9BACL) HSP 1 Score: 95.1 bits (235), Expect = 4.080e-19 Identity = 62/209 (29.67%), Postives = 103/209 (49.28%), Query Frame = 1 Query: 4 WAERRHLQRVFEIGQAFEREFGAGSIGTRVFPVYASWSIMPDRFNETLQWFEAWKGAGSAPKYLTHVASTSYFGYNDTKNLPPKATVSQIVAGFLNSSTHVPQ---DLQQIDAVAKAFGLKHASYEGSMGYRVGDETDVGNVIEAVRAPEATEIIK-----NWFTNYGKFYDVLHQFSFSGMYSQYGQWGAT-DLLEDLTTPKWKGFTT 603 W R QR+ EIG+ F+ E G ++ TRV PV + ++IMPD++ + L W K G Y +AS YF ++ A+ ++++ S + + +Q+ ++A +GLK +YEG G +V N I A R+ ++K N+ G D+ F+ + Y++YG WGAT D+ L TPK++ T+ Sbjct: 591 WTRHRIAQRLIEIGRQFQSELGEDALNTRVRPVLSWFAIMPDQYEDMLNWVS--KTYGDPKNYFYAIASAPYF---NSSAAGEAASATEVLTAMQADSANFSKPDGSKKQLISLADQYGLKSFTYEGGPDSGGGSTVNVDNRIAAHRSERMGNLVKYDVGNNFLAQDG---DMFMYFTLTSGYNRYGMWGATEDIFNGLNTPKYEALTS 791
BLAST of mRNA_M-pyrifera_M_contig81758.19139.1 vs. uniprot
Match: A0A328TX49_9BACL (Uncharacterized protein n=2 Tax=Paenibacillus montanisoli TaxID=2081970 RepID=A0A328TX49_9BACL) HSP 1 Score: 87.8 bits (216), Expect = 1.380e-16 Identity = 58/209 (27.75%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 4 WAERRHLQRVFEIGQAFEREFGAGSIGTRVFPVYASWSIMPDRFNETLQWFEAWKGAGSAPKYLTHVASTSYFGYNDTKNLPPKATVSQIVAGFLNSSTHVPQ---DLQQIDAVAKAFGLKHASYEGSMGYRVGDETDVGNVIEAVRAPEATEII-----KNWFTNYGKFYDVLHQFSFSGMYSQYGQWGAT-DLLEDLTTPKWKGFTT 603 W R +R+ EIG+ F+ FG ++ TRV PV + ++I+PD++ + L W K G +Y + S YF + + A+V++++ S + +A +GLK +YEG G +V N I A R+ + +++ N+ G D+ F+ + Y++YG WGAT D+ +L TPK++ T+ Sbjct: 597 WTRHRVAKRLIEIGRQFQTVFGEDALNTRVRPVLSWFAIIPDQYEDMLNWVS--KVYGDPKQYFYAIGSAPYFNSSAASDA---ASVTEVLTAMQEDSKRFSSPDGSKMSLIRLADQYGLKSFTYEGGPDSGGGSTINVENRIAAHRSEQMGDLVTYDVGNNFLDKNG---DMFMYFTLTSGYNRYGMWGATEDIFANLETPKYEALTS 797 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81758.19139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81758.19139.1 >prot_M-pyrifera_M_contig81758.19139.1 ID=prot_M-pyrifera_M_contig81758.19139.1|Name=mRNA_M-pyrifera_M_contig81758.19139.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=205bp VWAERRHLQRVFEIGQAFEREFGAGSIGTRVFPVYASWSIMPDRFNETLQback to top mRNA from alignment at M-pyrifera_M_contig81758:3..790+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81758.19139.1 ID=mRNA_M-pyrifera_M_contig81758.19139.1|Name=mRNA_M-pyrifera_M_contig81758.19139.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=788bp|location=Sequence derived from alignment at M-pyrifera_M_contig81758:3..790+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81758:3..790+ >mRNA_M-pyrifera_M_contig81758.19139.1 ID=mRNA_M-pyrifera_M_contig81758.19139.1|Name=mRNA_M-pyrifera_M_contig81758.19139.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1230bp|location=Sequence derived from alignment at M-pyrifera_M_contig81758:3..790+ (Macrocystis pyrifera P11B4 male)back to top |