mRNA_M-pyrifera_M_contig81554.19085.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81554.19085.1 vs. uniprot
Match: A0A812WSX9_9DINO (THO1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WSX9_9DINO) HSP 1 Score: 100 bits (249), Expect = 1.940e-20 Identity = 80/249 (32.13%), Postives = 119/249 (47.79%), Query Frame = 1 Query: 61 GKVDASLPLVVLERALECCSLRESGELWSLLEERREVFARPSILPRTR-NPPSKLVLLQLSNGLFRRLGHSQRDVQLRGRVLLFLAHVLPLTDKSGVNLTGTLSTPTL-----PSARRQEEGKAAEEGAGEGGDGGDALYAHFWALQKVAGDPIQVAKSKEAWGSFETSVKRVVEGMERELQARGGGKALGGGXXKAEGEAG-----VEEAGKVEGRYLTSRGLFRLQLGDVQVQRQVLVELLLVLGYL 774 G++ LPL+VLE AL C + LW++++ RR ++L ++ N KL LL+ SN L RL + + V L GR+ +FLA+ LPL+++SGVN GT S + P A +EE + Y FW L + P + S +AW F + V E+ + + E EAG ++ A +YLTS LF LQ D VQRQ+ ++LL+VL +L Sbjct: 45 GQLPVELPLLVLEEALYCSPAAQCALLWNVVDVRRSALTHTAVLEHSKANSRGKLALLRFSNSLLSRLSPAAQPV-LCGRIQVFLANALPLSERSGVNPKGTFSAENVTAFDTPPAGLEEEPTWQQ-------------YTAFWGLHEFLAVPPRATASMDAWREFMACCEAVATVFEQFPHGKSSAE---------EDEAGSAAPALDTATFFCPKYLTSFALFDLQKRDPVVQRQICIQLLIVLRFL 270
BLAST of mRNA_M-pyrifera_M_contig81554.19085.1 vs. uniprot
Match: A0A5A8DA97_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DA97_CAFRO) HSP 1 Score: 99.4 bits (246), Expect = 5.710e-20 Identity = 84/268 (31.34%), Postives = 121/268 (45.15%), Query Frame = 1 Query: 19 VGVLFDAGISLALGGKVDASLPLVVLERALECCSLRESGELWSLLEERREVFARPSILPRTR--NPPSKLVLLQLSNGLFRRLGHSQRDVQLRGRVLLFLAHVLPLTDKSGVNLTGTLS-TPTLPSARRQEEGKAAEEGAGEGGDGGDALYAHFWALQKVAGDPIQVAKSKEAW----GSFE---TSVKRVVEGMERELQARGGGKA-LGGGXXKAEGEAGVEEAGKVEG------RYLTSRGLFRLQLGDVQVQRQVLVELLLVLGY 771 + L D + A G +LP+ VLE A + LW + E R P +P NP SK+ LL+LSNGL RL S D +L GRVLLFL HVL L+DKSG+N G + +P AR G ++ D + FW+LQ + P + +S ++W +F+ ++V+ V R +++ A G G GV EG +LT+ L LQL D R VL++ ++ L Y Sbjct: 78 IAALVDGSAAAANAGTCSPALPMQVLEIAFASTPVSHCAALWDVAESRASTLGSPPFVPLDAGSNPASKVALLRLSNGLLARLS-SVHDAELCGRVLLFLGHVLRLSDKSGLNAAGHFAESPASRPARPSASGDTEDDEEAATWD----RFERFWSLQDLCARPWEAVESSDSWLRAVAAFDGVLSTVRESVSQCSRTARSQVAASAGASGSTAPPAGADGVSIEALPEGGADAIVNHLTAPSLLHLQLRDPAFLRHVLLQAVIALRY 340
BLAST of mRNA_M-pyrifera_M_contig81554.19085.1 vs. uniprot
Match: R1BCY2_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BCY2_EMIHU) HSP 1 Score: 95.1 bits (235), Expect = 1.060e-18 Identity = 69/204 (33.82%), Postives = 107/204 (52.45%), Query Frame = 1 Query: 1 AGLAGKVGV-LFDAGISLALGGKVDASLPLVVLERALECCSLRESGELWSLLEERREVFARPSILPRTRNPPSKLVLLQLSNGLFRRLGHSQRDVQLRGRVLLFLAHVLPLTDKSGVNLTGTLSTPTLP-----SARRQEEGKAAEEGAGEGGDGGDALYAHFWALQKVAGDPIQVAKSKEAWGSFETSVKRVVEGMERELQAR 594 AG AG + V L D I LA D + P ++E + + ES L+ +E+R A+ L R+ N +KL ++ N L RRL S ++ GRVLL +A++LPL+++SGVNL G ++ L +A ++EG AAE+G+ LYA FW LQ DP K E+W + + ++ V++ +L+AR Sbjct: 89 AGAAGALVVALIDRSIELATARAADLNTPFALMEDLFDSQVISESEALFPQIEQRGAALAK---LMRSTNNRAKLTFIRTCNELLRRLSKS-KNTNFCGRVLLLMAYMLPLSERSGVNLKGAMAPSDLELQPDEAADDKQEGSAAEDGS---------LYASFWGLQAAFADPAAAVKP-ESWATLVSRLETVLQEAAEKLRAR 278
BLAST of mRNA_M-pyrifera_M_contig81554.19085.1 vs. uniprot
Match: A0A2P6V5B9_9CHLO (THO complex subunit 1 isoform X1 isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V5B9_9CHLO) HSP 1 Score: 95.5 bits (236), Expect = 1.140e-18 Identity = 79/235 (33.62%), Postives = 108/235 (45.96%), Query Frame = 1 Query: 67 VDASLPLVVLERALECCSLRESGELWSLLEERREVFARPSILPRTRNPPSKLVLLQLSNGLFRRLGHSQRDVQLRGRVLLFLAHVLPLTDKSGVNLTGTLSTPTLPSARRQEEGKAAEEGAGEGGDGGDALYAHFWALQKVAGDPIQVAKSKEAWGSFETSVKRVVEGMERELQARGGGKALGGGXXKAEGEAGVEEAGKVEGRYLTSRGLFRLQLGDVQVQRQVLVELLLVLGY 771 V+ L +LE E S + L++ L+ R EVF P + SKL LL+ N L +RL S + L GRVLLFLA +LPLT++SGVNL G +T + EG EG A Y FW LQ +P A WG ++RV+E + E G G A G A G G +YL+S L LQL D +R L++ L+++ + Sbjct: 128 VEPGLAAQLLEEISEGASNADCEGLYAYLDSRTEVFKAPPL-----QGASKLTLLRTCNALLKRLSKSANAL-LCGRVLLFLAKLLPLTERSGVNLGGAFNTDNVTPVEEVAEGAVDSEGQPVD----VAFYRTFWGLQSYFSNP-PAALQPGKWGEVSRDIRRVLEKFQAEKVTVGEGAAAG---AAANGGQGASV------KYLSSSRLMSLQLRDATFRRHFLLQCLILMQW 342
BLAST of mRNA_M-pyrifera_M_contig81554.19085.1 vs. uniprot
Match: A0A830BZ07_9LAMI (THO complex subunit 1 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BZ07_9LAMI) HSP 1 Score: 93.6 bits (231), Expect = 4.990e-18 Identity = 73/254 (28.74%), Postives = 123/254 (48.43%), Query Frame = 1 Query: 13 GKVGVLFDAGISLALGGKVDASLPLVVLERALECCSLRESGELWSLLEERREVFARPSILPRTRNPPSKLVLLQLSNGLFRRLGHSQRDVQLRGRVLLFLAHVLPLTDKSGVNLTGTLSTPTLPSARRQEEGKAAEEGAGEGGDGGDALYAHFWALQKVAGDPIQVAKSKEAWGSFETSVKRVVEGMERELQARGGGKALGGGXXKAEGEAGVEEAGKVEGRYLTSRGLFRLQLGDVQVQRQVLVELLLVLGYL 774 G++ L D + L ++ + +LE E ++R +++ +E ++++ +P + R KLV+L+ N L RRL + DV GR+++FLAH PL+++S VN+ G +T S + E +AAE + Y FW+LQ+ +P +A + W F +S+ V+ E + + G AL E +EA +YLTS L L+L D +R VLV+ L++ YL Sbjct: 89 GQIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCKDIFGYIESKQDILGKPELFAR-----GKLVMLRTCNQLLRRLSKAN-DVVFCGRIIMFLAHFFPLSERSAVNIKGVFNT----SNETKYEKEAAESSTIDFN-----FYKTFWSLQEFFSNPASLAPAPTKWQKFISSLAVVLSTFEAQPLSDEEGTAL-----NLE-----DEASNFSIKYLTSSNLMGLELKDPSFRRHVLVQCLILFDYL 317
BLAST of mRNA_M-pyrifera_M_contig81554.19085.1 vs. uniprot
Match: E1ZSN2_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZSN2_CHLVA) HSP 1 Score: 92.8 bits (229), Expect = 9.300e-18 Identity = 81/256 (31.64%), Postives = 118/256 (46.09%), Query Frame = 1 Query: 13 GKVGVLFDAGISLALG--GKVDASLPLVVLERALECCSLRESGELWSLLEERREVFARPSILPRTRNPPSKLVLLQLSNGLFRRLGHSQRDVQLRGRVLLFLAHVLPLTDKSGVNLTGTLSTPTLPSARRQEEGKAAEEGAGEGGDGGDALYAHFWALQKVAGDP---IQVAKSKEAWGSFETSVKRVVEGMERELQARGGGKALGGGXXKAEGEAGVEEAGKVEGRYLTSRGLFRLQLGDVQVQRQVLVELLLVL 765 G V L DA + LA +D LP +LE+ E S+++ +++ L+ R F P+ + K LL+ N L +RL S + L GR+LLFLA +LPLT++SGVNL G +T +EG EG A Y FW LQ +P +QV K WG ++RV+E E G A G G +G + +YL+S L LQL D +R L++ L+++ Sbjct: 94 GAVAELLDAVLWLAAQKPSPLDVGLPAQLLEQITEGASVQDCEGVFAFLDSRTATFKSPAF----QEARCKNTLLRTCNMLLKRLSKSA-NAMLCGRILLFLAKLLPLTERSGVNLGGAFNTDNSTPVEDVQEGATDSEGKPVDA----AFYRTFWGLQSYFSNPPAALQVGK----WGEVSRDIRRVLEKFRLEKVTVGESAAAGPGAGDGQGSS---------VKYLSSSRLMGLQLRDATFRRHFLLQCLILM 327
BLAST of mRNA_M-pyrifera_M_contig81554.19085.1 vs. uniprot
Match: A0A3S3P424_9MAGN (THO complex subunit 1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3P424_9MAGN) HSP 1 Score: 92.8 bits (229), Expect = 9.490e-18 Identity = 73/254 (28.74%), Postives = 119/254 (46.85%), Query Frame = 1 Query: 13 GKVGVLFDAGISLALGGKVDASLPLVVLERALECCSLRESGELWSLLEERREVFARPSILPRTRNPPSKLVLLQLSNGLFRRLGHSQRDVQLRGRVLLFLAHVLPLTDKSGVNLTGTLSTPTLPSARRQEEGKAAEEGAGEGGDGGDALYAHFWALQKVAGDPIQVAKSKEAWGSFETSVKRVVEGMERELQARGGGKALGGGXXKAEGEAGVEEAGKVEGRYLTSRGLFRLQLGDVQVQRQVLVELLLVLGYL 774 G++ L D + L G V+ +LE E ++R+ E++ +E ++++ +P + R KLV+L+ N L RRL + DV+ GR+L FLAH PL+++S VN+ G + + E K E+ A +G Y FW+LQ+ DP W F +++ V++ E + + G A EEA +YLTS L L+L D +R +LV+ L++ YL Sbjct: 112 GQIPRLLDIVLYLCEKGHVEGGTIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKPELFGR-----GKLVMLRTCNQLLRRLSKAN-DVEFCGRILTFLAHFFPLSERSAVNIKGVFN--------KSNETKY-EKDAPDGISVDFNFYKTFWSLQEHFCDPASTTVGPIKWQKFSSNLMVVLDTFEAQPLSEDDGNAN---------HLEEEEAAAFNIKYLTSSKLMGLELKDPSFRRHILVQCLILFNYL 341
BLAST of mRNA_M-pyrifera_M_contig81554.19085.1 vs. uniprot
Match: I0Z5D1_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z5D1_COCSC) HSP 1 Score: 92.8 bits (229), Expect = 1.030e-17 Identity = 80/253 (31.62%), Postives = 122/253 (48.22%), Query Frame = 1 Query: 28 LFDAGISLALGGKVDASLPLVVLERALECCSLRESGELWSLLEER----REVFARPSILPRTRNPPSKLVLLQLSNGLFRRLGHSQRDVQLRGRVLLFLAHVLPLTDKSGVNLTGTLSTPTLPSARRQEEGKAAEEGAGEGGDGGDALYAHFWALQKVAGDPIQVAKSKEAWGSFETSVKRVVEGMERE---LQARGGGKALGGGXXKAEGEAGVEEAGKVEGRYLTSRGLFRLQLGDVQVQRQVLVELLLVL 765 L D + L ++D L ++E +E ++ E+ ++ LE R R+V+ S SKL +L++ N L RRL + +L GR+L+FL +LPL D+SG+N+ G +T EG A + G+ D A YA FW LQ V P A W + T +KRV+ ++ L + GG EGE G+ EA + +YL+S L RLQL D ++R L++ L+ L Sbjct: 96 LLDLTVYLGSQRQIDTVLVFAIMEDVMELSTIEEAEGVFGYLESRIQKLRQVYNFGSATSH-----SKLSVLRICNQLLRRLSRASSS-ELCGRILMFLTRLLPLLDRSGLNVQGQFNTSHSTPVEDVPEG--AVDSNGQPVDA--AFYATFWGLQDVFQHPY-TAMEPSKWAATITDIKRVLTEFTKQPVALASSSGG----------EGEGGLLEAAALTVKYLSSPKLMRLQLQDATLRRHFLLQALIFL 327
BLAST of mRNA_M-pyrifera_M_contig81554.19085.1 vs. uniprot
Match: A0A2G5F843_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5F843_AQUCA) HSP 1 Score: 91.3 bits (225), Expect = 1.230e-17 Identity = 70/254 (27.56%), Postives = 120/254 (47.24%), Query Frame = 1 Query: 13 GKVGVLFDAGISLALGGKVDASLPLVVLERALECCSLRESGELWSLLEERREVFARPSILPRTRNPPSKLVLLQLSNGLFRRLGHSQRDVQLRGRVLLFLAHVLPLTDKSGVNLTGTLSTPTLPSARRQEEGKAAEEGAGEGGDGGDALYAHFWALQKVAGDPIQVAKSKEAWGSFETSVKRVVEGMERELQARGGGKALGGGXXKAEGEAGVEEAGKVEGRYLTSRGLFRLQLGDVQVQRQVLVELLLVLGYL 774 G++ L D + L G V+ + +LE E ++R+ E++ +E ++++ + + R KLV+L+ N L RRL + DV GR+L+FLAH PL+++S VN+ G +T + E+ A G Y FW+LQ+ +P + W F++++ V++ E + + GKA EE+ +YLTS L L+L D +R +LV+ L++ YL Sbjct: 112 GQIPRLLDIVLFLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGR-----GKLVMLRTCNQLLRRLSKAN-DVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETNY---------EKDAPNGISIDFNFYKTFWSLQEHFRNPASTTVAPTKWHKFQSNLTVVLDTFEAQPLSDDDGKAN---------NLEEEESAAFNIKYLTSSNLMGLELKDPSFRRHILVQCLILFDYL 341
BLAST of mRNA_M-pyrifera_M_contig81554.19085.1 vs. uniprot
Match: A0A7J7N133_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7N133_9MAGN) HSP 1 Score: 92.4 bits (228), Expect = 1.290e-17 Identity = 72/254 (28.35%), Postives = 122/254 (48.03%), Query Frame = 1 Query: 13 GKVGVLFDAGISLALGGKVDASLPLVVLERALECCSLRESGELWSLLEERREVFARPSILPRTRNPPSKLVLLQLSNGLFRRLGHSQRDVQLRGRVLLFLAHVLPLTDKSGVNLTGTLSTPTLPSARRQEEGKAAEEGAGEGGDGGDALYAHFWALQKVAGDPIQVAKSKEAWGSFETSVKRVVEGMERELQARGGGKALGGGXXKAEGEAGVEEAGKVEGRYLTSRGLFRLQLGDVQVQRQVLVELLLVLGYL 774 G++ L D + L GG V+ + +LE E ++R+ E++ +E ++++ + + R KLV+L+ N L RRL + DV GR+L+FLAH PL+++S VN+ G +T E K E+ A +G Y FW+LQ+ +P + W F++++ V++ E + + G A EEA +YLTS L L+L D +R +L++ L++ YL Sbjct: 112 GQIPRLLDILLYLCEGGHVEGGMIFQLLEDLTEISTMRDCKEVFGYIESKQDILGKQELFMR-----GKLVMLRTCNQLLRRLSKAN-DVVFCGRILMFLAHFFPLSERSAVNIKGVFNT--------SNETKY-EKDAPDGISIDFNFYKTFWSLQEHFSNPAFTTVTPIKWHKFKSNLMVVLDTFEAQPLSEDDGNAN---------NLEEEEAASFSIKYLTSSKLMGLELKDPSFRRHILIQCLILFDYL 341 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81554.19085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81554.19085.1 >prot_M-pyrifera_M_contig81554.19085.1 ID=prot_M-pyrifera_M_contig81554.19085.1|Name=mRNA_M-pyrifera_M_contig81554.19085.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=259bp AGLAGKVGVLFDAGISLALGGKVDASLPLVVLERALECCSLRESGELWSLback to top mRNA from alignment at M-pyrifera_M_contig81554:1..777- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81554.19085.1 ID=mRNA_M-pyrifera_M_contig81554.19085.1|Name=mRNA_M-pyrifera_M_contig81554.19085.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=777bp|location=Sequence derived from alignment at M-pyrifera_M_contig81554:1..777- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81554:1..777- >mRNA_M-pyrifera_M_contig81554.19085.1 ID=mRNA_M-pyrifera_M_contig81554.19085.1|Name=mRNA_M-pyrifera_M_contig81554.19085.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1554bp|location=Sequence derived from alignment at M-pyrifera_M_contig81554:1..777- (Macrocystis pyrifera P11B4 male)back to top |