mRNA_M-pyrifera_M_contig81029.18954.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81029.18954.1 vs. uniprot
Match: A0A5A8B3U0_9PLAN (Carboxypeptidase regulatory-like domain-containing protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A5A8B3U0_9PLAN) HSP 1 Score: 159 bits (402), Expect = 3.600e-46 Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 1
Query: 1 LPQMFYATQQITQTTDAQGTTVFAWIPHWQKQRMYLVLEERKYIPHRIFYDPAKDKGTLTVQLTPKPPAPEQDRKP 228
LPQMFYATQQITQTTDAQGTTVFAWIPHWQKQRMYLVLEERKYIPHRIFYDPAKDKGTLTVQLTPKPPAPEQD KP
Sbjct: 279 LPQMFYATQQITQTTDAQGTTVFAWIPHWQKQRMYLVLEERKYIPHRIFYDPAKDKGTLTVQLTPKPPAPEQDHKP 354
BLAST of mRNA_M-pyrifera_M_contig81029.18954.1 vs. uniprot
Match: A0A6I6AE29_9PLAN (Carboxypeptidase regulatory-like domain-containing protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AE29_9PLAN) HSP 1 Score: 129 bits (324), Expect = 1.690e-34 Identity = 58/76 (76.32%), Postives = 67/76 (88.16%), Query Frame = 1
Query: 1 LPQMFYATQQITQTTDAQGTTVFAWIPHWQKQRMYLVLEERKYIPHRIFYDPAKDKGTLTVQLTPKPPAPEQDRKP 228
LP MFY T+Q+ QTTD GTTVFAW+PHWQKQR+Y ++ R+YIPHRI Y+P+KDKGTLTVQLTPKPPAPEQDRKP
Sbjct: 288 LPLMFYVTRQLEQTTDNAGTTVFAWLPHWQKQRIYFWVKNREYIPHRIAYEPSKDKGTLTVQLTPKPPAPEQDRKP 363
BLAST of mRNA_M-pyrifera_M_contig81029.18954.1 vs. uniprot
Match: A0A517PZN2_9PLAN (Bacterial Ig-like domain (Group 1) n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517PZN2_9PLAN) HSP 1 Score: 109 bits (272), Expect = 5.850e-27 Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 1 LPQMFYATQQITQTTDAQGTTVFAWIPHWQKQRMYLVLEERKYIPHRIFYDPAKDKGTLTVQLTPKPPAPEQDRKP 228
LP MFYAT+Q+ Q TD G TVFAWIPHWQ QRMY ++ ++Y+PHRI Y+P+KDKGTLTV+L+PKP PE+ P
Sbjct: 275 LPLMFYATRQLVQPTDETGATVFAWIPHWQNQRMYFGVKNKEYVPHRITYEPSKDKGTLTVRLSPKPKEPEKGSTP 350
BLAST of mRNA_M-pyrifera_M_contig81029.18954.1 vs. uniprot
Match: A6CC14_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A6CC14_9PLAN) HSP 1 Score: 97.8 bits (242), Expect = 1.420e-22 Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 1
Query: 10 MFYATQQITQTTDAQGTTVFAWIPHWQKQRMYLVLEERKYIPHRIFYDPAKDKGTLTVQLTPK 198
MFY T+Q+ QTTD GT VFAWIPHWQKQRMY + ++YIPHR Y+PAKDKG VQL PK
Sbjct: 283 MFYTTRQLVQTTDGTGTIVFAWIPHWQKQRMYFGVHNKEYIPHRFVYEPAKDKGAFKVQLKPK 345
BLAST of mRNA_M-pyrifera_M_contig81029.18954.1 vs. uniprot
Match: A0A517PG46_9PLAN (Nickel uptake substrate-specific transmembrane region n=4 Tax=Gimesia TaxID=1649453 RepID=A0A517PG46_9PLAN) HSP 1 Score: 63.2 bits (152), Expect = 7.700e-10 Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 1
Query: 1 LPQMFYATQQITQTTDAQGTTVFAWIPHWQKQRMYLVLEERKYIPHRIFYDPAKDKGTLTVQL 189
L +FY + QTTDA+G TVF WIPHWQKQ++ + Y R Y PA KG LT++L
Sbjct: 274 LGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMEL 336
BLAST of mRNA_M-pyrifera_M_contig81029.18954.1 vs. uniprot
Match: A0A517R868_9PLAN (Nickel uptake substrate-specific transmembrane region n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R868_9PLAN) HSP 1 Score: 56.6 bits (135), Expect = 1.560e-7 Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 1
Query: 16 YATQQITQTTDAQGTTVFAWIPHWQKQRMYLVLEERKYIPHRIFYDPAKDKGTLTVQL 189
+ T + QTTDA+GT VF WIP WQK + + +++++ R YDP GTLT++L
Sbjct: 324 FFTSLVEQTTDAEGTVVFQWIPGWQKLPLTIWPRDKEHVLQRGNYDPKTGDGTLTIKL 381
BLAST of mRNA_M-pyrifera_M_contig81029.18954.1 vs. uniprot
Match: A0A518G6J6_9BACT (Bacterial Ig-like domain (Group 1) n=1 Tax=Aureliella helgolandensis TaxID=2527968 RepID=A0A518G6J6_9BACT) HSP 1 Score: 50.1 bits (118), Expect = 3.190e-5 Identity = 23/58 (39.66%), Postives = 32/58 (55.17%), Query Frame = 1
Query: 16 YATQQITQTTDAQGTTVFAWIPHWQKQRMYLVLEERKYIPHRIFYDPAKDKGTLTVQL 189
Y +TQ +D QG T FAW+P WQ+Q + L + Y R+ YDPAK+ + L
Sbjct: 270 YLAASVTQVSDRQGETTFAWLPKWQQQIVTLWPQAEGYEHIRVHYDPAKELQPVRATL 327 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81029.18954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81029.18954.1 >prot_M-pyrifera_M_contig81029.18954.1 ID=prot_M-pyrifera_M_contig81029.18954.1|Name=mRNA_M-pyrifera_M_contig81029.18954.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp MFYATQQITQTTDAQGTTVFAWIPHWQKQRMYLVLEERKYIPHRIFYDPAback to top mRNA from alignment at M-pyrifera_M_contig81029:707..937- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81029.18954.1 ID=mRNA_M-pyrifera_M_contig81029.18954.1|Name=mRNA_M-pyrifera_M_contig81029.18954.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=231bp|location=Sequence derived from alignment at M-pyrifera_M_contig81029:707..937- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81029:707..937- >mRNA_M-pyrifera_M_contig81029.18954.1 ID=mRNA_M-pyrifera_M_contig81029.18954.1|Name=mRNA_M-pyrifera_M_contig81029.18954.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig81029:707..937- (Macrocystis pyrifera P11B4 male)back to top |