mRNA_M-pyrifera_M_contig80366.18827.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig80366.18827.1
Unique NamemRNA_M-pyrifera_M_contig80366.18827.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: UPI001C265E59 (probable polygalacturonase At1g80170 isoform X3 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C265E59)

HSP 1 Score: 147 bits (370), Expect = 1.240e-38
Identity = 89/222 (40.09%), Postives = 124/222 (55.86%), Query Frame = 1
Query:   79 GAKGDGKSNDTTAFLAAVGNCTGVSGASV-LVPSGT-FLVWPLKLQK--VDGLTIQIDGVLQAPL-MKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEA-----RHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 714
            GAKGDG S+DT AF+ A        G+S+ LVP G  +LV   K +      LTIQI+G + AP  ++ W   +P  +    + SN S  G GVIDG+G+ WW A     + N    AP  L   S +S  V ++ +RN+   HF+I  S  + V+ V  ++P DSPNTD I    S+N+    C+I  GDDC++I  E+ NI +++  C   HGISIGSLG
Sbjct:   57 GAKGDGVSDDTKAFVNAWKKACSKQGSSIFLVPKGKRYLVSATKFKGPCAGMLTIQIEGTIVAPDDIETWDPDFPRMWLGYYNLSNVSFEGKGVIDGSGSKWWAASCKRNKSNPCRGAPTALTIDSSSSVNVKDLTIRNAQQMHFIIGRSDSVRVSGVTISAPGDSPNTDGIHVTGSTNVVLQDCKIGTGDDCISIVSESSNIKMKNIYCGPGHGISIGSLG 278          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: UPI00126330E6 (probable polygalacturonase At3g15720 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI00126330E6)

HSP 1 Score: 137 bits (346), Expect = 7.690e-35
Identity = 78/225 (34.67%), Postives = 121/225 (53.78%), Query Frame = 1
Query:   58 VCNPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGAS--VLVPSG-TFLVWPLKLQ---KVDGLTIQIDGVLQAPLMKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEARHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 714
            V N +  GA GDG+ +D+ AFL A     G +  +  +L+P+G TFL+ P+K Q       +  +I G + AP M  W      ++   E+ +   + G+G IDG GA WW+ + +  ++ P  L F+  T+  +  +   NSP  H  +    ++ ++ ++  +P  SPNTD ID G + N+Y H C I  GDDC+AI  E++N  +    C   HGISIGSLG
Sbjct:   40 VVNVMKMGAVGDGRKDDSQAFLRAWAAVCGANKTAPLLLIPAGRTFLLKPVKFQGPCTSSAINFKILGNIMAPDMTAWKGDDRQNWLVFENINWLKIDGNGQIDGRGASWWQ-QESEPEKRPAALTFNKCTNLRLNQLKHINSPRNHITVTGCRNVVISHLNITAPGSSPNTDGIDIGQTRNVYIHDCNIETGDDCIAIGTESFNFKISHVTCGPGHGISIGSLG 263          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: A0A5J9UCW7_9POAL (Uncharacterized protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UCW7_9POAL)

HSP 1 Score: 135 bits (341), Expect = 3.100e-34
Identity = 94/243 (38.68%), Postives = 134/243 (55.14%), Query Frame = 1
Query:   16 VIFLLCITTAHGR-LVCNPLDHGAKGDGKSNDTTAFLA---AVGNCTGVSGASVLVPSG-TFLVWPLKLQKV--DGLTIQIDGVLQAPLMKQWTTPYP--YSYFEIESSSNFSLIGSGVIDGNGADWWEA-RHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 714
            V+ +L I  A GR    N LD  A GDG+++DT AFL    A  NC   S   ++VP G TFL+  +K +      +T+Q+DG + AP  K WT+      ++  ++S    +L G+GVIDG GA WW+   H   D  P LL F+   + +V +I L +S   H  + + + ++V +V   +P DSPNTD I   SS+N+    C I  GDDCV+I   T N+ V +  C   HGIS+GSLG
Sbjct:   13 VLLVLVIRWAEGRPQKYNVLDFHAFGDGETDDTEAFLRTWQAACNCR--SQPVMVVPGGRTFLLAQIKFEGPCKSPITVQLDGKIVAP-NKIWTSEEANLLTFCRVDS---LTLDGNGVIDGQGAIWWDCYNHKRCDNRPILLGFAFCNNLVVKSINLTDSADKHMTLFQCSQVQVYNVSITAPGDSPNTDGITMASSNNISISSCFIQTGDDCVSILSHTTNVNVTNCTCGPGHGISVGSLG 249          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: UPI000900C6CA (probable polygalacturonase At3g15720 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000900C6CA)

HSP 1 Score: 135 bits (341), Expect = 3.440e-34
Identity = 82/224 (36.61%), Postives = 122/224 (54.46%), Query Frame = 1
Query:   64 NPLDHGAKGDGKSNDTTAFLAAVG-NCTG-VSGASVLVPSG-TFLVWPLKLQ---KVDGLTIQIDGVLQAPL-MKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEARHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 714
            N LD GAKGDG+++D+TAF+ A    C G  +  ++L+PSG TFL+ P+      K   + IQ+DGV+ AP  +  W+ P    +    S     + GSG IDG G+ +WE +   + + P  L  +   +  +  I   NSP  H  IK    + ++ ++  +P  SPNTD ID  +S+N+      I  GDDC+AIK  ++NI +    C   HGIS+GSLG
Sbjct:   29 NVLDFGAKGDGQTDDSTAFVQAWNATCRGDENNTTLLIPSGQTFLLQPIVFNGPCKSTSIKIQLDGVIIAPSNITAWSNPKSQMWIGFSSIFGLVVDGSGKIDGGGSSFWELKLK-VSQRPTALRINRCNNLTIKGISSINSPKTHLSIKSCNYVAISKINLLAPETSPNTDGIDISNSTNINIFDSTIQTGDDCIAIKTGSFNINITQINCGPGHGISVGSLG 251          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: UPI001FB186F8 (polygalacturonase At1g48100-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB186F8)

HSP 1 Score: 135 bits (340), Expect = 9.430e-34
Identity = 81/230 (35.22%), Postives = 118/230 (51.30%), Query Frame = 1
Query:   64 NPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLVPSG-TFLVWPLKLQKVD---GLTIQIDGVLQAPLMKQ-WTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWW--EARHNGLDEA------PKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 714
            N LD+GAKGDG S++T AFLAA  +   +  + +LVPSG  FLV P+     +    +  Q+DG + AP     W + +   + E ++    ++ G G IDG G+ WW      NG          P  L F   T   V  I ++NSP  H      T ++V+D+  +SP +SPNTD I   ++ N+      +  GDDC++I+    N+ + D  C   HGISIGSLG
Sbjct:   54 NVLDYGAKGDGNSDETKAFLAAWEDVCQMDESIMLVPSGYVFLVQPISFVVPNCGSNIIFQLDGTIIAPTSSSAWGSGF-LQWIEFKNLKGITIRGKGTIDGQGSVWWTNSRNENGASSENLPNTKPTALRFYGSTDITVTGIKIQNSPQTHLKFDSCTKVKVSDITVSSPSNSPNTDGIHLQNTQNVLIQTSTLACGDDCISIQTGCSNVYIHDITCGPGHGISIGSLG 282          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: D8S8U4_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S8U4_SELML)

HSP 1 Score: 134 bits (338), Expect = 1.110e-33
Identity = 88/232 (37.93%), Postives = 127/232 (54.74%), Query Frame = 1
Query:   64 NPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLVPSG-TFLVWPLKLQK--VDGLTIQIDGVLQAPL--MKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWE--ARHNGL---DEAPKLLYFSSMTSSIVANILLR-----NSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 714
            N ++ GA+GDG S+D+ AFLAA         A++LVP G  F+V  L L       L ++IDG++ A    M  W+     ++  I    +FS+ G G+IDG G +WW    R N     D + +L  F +  SS  ANI ++     NSP  H  I+ES+++ +  V   +P DSPNTD I    S+N+    C I  GDDC++I + T N+V+ + +C   HGISIGSLG
Sbjct:   29 NVVEFGARGDGLSDDSQAFLAAWKRACHTENATMLVPGGKAFVVNYLLLTGPCATNLRLKIDGIVLADTRDMIHWSNIT--TWISIARVYDFSVEGYGIIDGQGEEWWRISCRRNSSYVSDSSYRLYSFLTFDSS--ANITIQDLKFVNSPQMHLAIEESSNVSIKGVEILAPHDSPNTDGIHLHMSNNVSIEKCIIGTGDDCISIAKNTSNVVIREIICGPGHGISIGSLG 256          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: UPI0011E04BCB (polygalacturonase At1g48100 n=1 Tax=Cannabis sativa TaxID=3483 RepID=UPI0011E04BCB)

HSP 1 Score: 135 bits (341), Expect = 1.250e-33
Identity = 89/232 (38.36%), Postives = 124/232 (53.45%), Query Frame = 1
Query:   58 VCNPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLVPSG-TFLVWPLKLQK--VDGLTIQIDGVLQAP-LMKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWW--------EARHNGL-DEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 714
            + N L  GAKGDG S+D+ A LAA      VSGA+V++PS   FL+ P+ LQ   +  L  QIDG L AP  +  W     + +   +  +NF++ G+GV+DG G++WW        + +   + D  P  L F S     V NI + NSP  H     S  I+V ++  +SP +SPNTD I   +S ++  H   I  GDDCV+I+    N+ V    C   HGISIGSLG
Sbjct:   83 IFNVLSFGAKGDGVSDDSKALLAAWEGACKVSGATVIIPSKYKFLIKPIILQGPCMPHLIFQIDGTLLAPPKIGSWQKYNLFQWIYFKWINNFTIQGTGVVDGQGSNWWCLSQVYNTQKKSKYIPDMKPTALRFYSSNDVTVKNIKIINSPQCHLKFDSSKRIKVDNITISSPENSPNTDGIHLQNSQDVEIHHSNIGCGDDCVSIQTGCSNVHVHHINCGPGHGISIGSLG 314          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: A0A087HH58_ARAAL (NAC domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HH58_ARAAL)

HSP 1 Score: 136 bits (342), Expect = 1.930e-33
Identity = 88/238 (36.97%), Postives = 121/238 (50.84%), Query Frame = 1
Query:   31 CITTAH-GRLVCNPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLVPSGT-FLVWPLKLQKV--DGLTIQIDGVLQAPL-MKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEA-----RHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 714
            C+T+ + G+ + N    GA GDG S+DT AF +A         + +LVP G  +LV   K      + L IQIDG + AP    QW   +   + E       +  G+GVIDG+GA WW A     + N    AP  L   S +   V  + +RNS   H  I  S  + ++ V   SP DSPNTD I   +S+N+    C+I+ GDDCV+I  E+  I ++   C   HGISIGSLG
Sbjct:   44 CLTSQNSGKNLVNVDSFGAVGDGVSDDTQAFTSAWKIACSAPKSVLLVPQGRRYLVNATKFNGPCQEKLIIQIDGTIVAPDDPSQWNPRFQRVWLEFTKLQGVAFQGNGVIDGSGAKWWAASCKKNKTNPCIGAPTALTIDSSSGVYVRGLTIRNSQQMHMSISRSNTVRISRVMVTSPGDSPNTDGIHITASTNVVVQDCKISTGDDCVSIVNESTRIKMKKIYCGPGHGISIGSLG 281          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: J3KWV0_ORYBR (Uncharacterized protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3KWV0_ORYBR)

HSP 1 Score: 134 bits (336), Expect = 3.920e-33
Identity = 96/244 (39.34%), Postives = 127/244 (52.05%), Query Frame = 1
Query:    7 FLLVIFLLCITT-AHGRLVCNPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLV-PSG-TFLVWPLKLQKVDG-----LTIQIDGVLQAPLMKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEARHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 714
            FLLV+ L  + + A  R   N LD  A GDGKS+DT AFLAA        G  +L+ P G TFL   LK     G     + IQ+DG + AP    WT+    +     S  N +L G+G IDG GA WW           KLL F+   +  V NI L NSP+ H ++   + + V +V  N+P DSPNTD I    S ++Y   C I +GDDCV++   T ++ + D  C   HGIS+GSLG
Sbjct:   72 FLLVLALRSVRSEALKRPSHNVLDFNAAGDGKSDDTQAFLAAWEQTCNDDGWPILIIPGGRTFL---LKQVTFSGSCKSPIMIQVDGNIVAPNYI-WTSEQD-NLITFYSVDNLTLEGNGQIDGKGAIWWTCY------TQKLLAFAQCNNLSVRNIHLTNSPIKHMILFRCSQVHVYNVSINAPGDSPNTDGITMAISDHVYISNCSIQSGDDCVSMLSHTTDVNITDTRCGPGHGISVGSLG 304          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: M5Y240_PRUPE (Uncharacterized protein n=7 Tax=Prunus TaxID=3754 RepID=M5Y240_PRUPE)

HSP 1 Score: 134 bits (336), Expect = 5.210e-33
Identity = 83/226 (36.73%), Postives = 118/226 (52.21%), Query Frame = 1
Query:   70 LDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLVPSG-TFLVWPLKLQK---VDGLTIQIDGVLQAPLMKQ-WTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEA------RHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 714
            L  GAKGDG S+D+ A +AA      V GA+V +PSG  FL+ P+ L     +  L +QIDG L AP     W     + +   + + NF++ G+G++DG G+DWW +      +H   D  P  L F   +   V NI + NSP  H     S+ I+V ++   SP  SPNTD I   ++ N+  H   I  GDDCV+I+    N+ +    C   HGIS+G LG
Sbjct:   77 LSFGAKGDGVSDDSKALVAAWEAACRVKGATVEIPSGFKFLIQPITLDGSGCMPDLVLQIDGTLLAPSKASTWPESSLFQWINFKYARNFTIQGTGIVDGQGSDWWNSSAHKRSKHTP-DTKPTALRFYFSSDVTVRNIKIINSPQCHLKFDNSSWIKVNNITITSPDYSPNTDGIHLQNTQNVEIHHSTIGCGDDCVSIQTGCSNVHIHHVKCGPGHGISLGGLG 301          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C265E591.240e-3840.09probable polygalacturonase At1g80170 isoform X3 n=... [more]
UPI00126330E67.690e-3534.67probable polygalacturonase At3g15720 n=1 Tax=Pista... [more]
A0A5J9UCW7_9POAL3.100e-3438.68Uncharacterized protein (Fragment) n=1 Tax=Eragros... [more]
UPI000900C6CA3.440e-3436.61probable polygalacturonase At3g15720 n=1 Tax=Camel... [more]
UPI001FB186F89.430e-3435.22polygalacturonase At1g48100-like n=1 Tax=Impatiens... [more]
D8S8U4_SELML1.110e-3337.93Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
UPI0011E04BCB1.250e-3338.36polygalacturonase At1g48100 n=1 Tax=Cannabis sativ... [more]
A0A087HH58_ARAAL1.930e-3336.97NAC domain-containing protein n=1 Tax=Arabis alpin... [more]
J3KWV0_ORYBR3.920e-3339.34Uncharacterized protein n=1 Tax=Oryza brachyantha ... [more]
M5Y240_PRUPE5.210e-3336.73Uncharacterized protein n=7 Tax=Prunus TaxID=3754 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80366contigM-pyrifera_M_contig80366:138..949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score143.7
Seed ortholog evalue1.1e-31
Seed eggNOG ortholog4113.PGSC0003DMT400055713
KEGG rclassRC00049
KEGG koko:K01213
KEGG ReactionR01982,R07413
KEGG Pathwayko00040,ko01100,map00040,map01100
KEGG ModuleM00081
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005618,GO:0005623,GO:0009505,GO:0030312,GO:0044464,GO:0071944
EggNOG free text desc.Glycosyl hydrolases family 28
EggNOG OGs2R29U@2759,37M8W@33090,3G7HB@35493,44SXT@71274,COG5434@1
EC3.2.1.67
COG Functional cat.G
Best tax levelasterids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons2
Model size714
Cds size714
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816709.0196211-CDS-M-pyrifera_M_contig80366:137..7801622816709.0196211-CDS-M-pyrifera_M_contig80366:137..780Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80366 138..780 +
1692278133.1034975-CDS-M-pyrifera_M_contig80366:137..7801692278133.1034975-CDS-M-pyrifera_M_contig80366:137..780Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80366 138..780 +
1622816709.033682-CDS-M-pyrifera_M_contig80366:878..9491622816709.033682-CDS-M-pyrifera_M_contig80366:878..949Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80366 879..949 +
1692278133.1150048-CDS-M-pyrifera_M_contig80366:878..9491692278133.1150048-CDS-M-pyrifera_M_contig80366:878..949Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80366 879..949 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80366.18827.1prot_M-pyrifera_M_contig80366.18827.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig80366 138..949 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig80366.18827.1

>prot_M-pyrifera_M_contig80366.18827.1 ID=prot_M-pyrifera_M_contig80366.18827.1|Name=mRNA_M-pyrifera_M_contig80366.18827.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp
MRFLLVIFLLCITTAHGRLVCNPLDHGAKGDGKSNDTTAFLAAVGNCTGV
SGASVLVPSGTFLVWPLKLQKVDGLTIQIDGVLQAPLMKQWTTPYPYSYF
EIESSSNFSLIGSGVIDGNGADWWEARHNGLDEAPKLLYFSSMTSSIVAN
ILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHG
CRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG
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mRNA from alignment at M-pyrifera_M_contig80366:138..949+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig80366.18827.1 ID=mRNA_M-pyrifera_M_contig80366.18827.1|Name=mRNA_M-pyrifera_M_contig80366.18827.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=812bp|location=Sequence derived from alignment at M-pyrifera_M_contig80366:138..949+ (Macrocystis pyrifera P11B4 male)
ATGCGCTTTTTGCTGGTGATTTTCCTTCTTTGTATTACTACGGCACATGG AAGGTTGGTGTGTAACCCTTTGGACCACGGAGCAAAAGGAGATGGCAAGA GCAACGACACTACTGCATTTCTCGCGGCTGTTGGCAATTGTACCGGTGTT TCTGGTGCATCTGTACTTGTGCCTAGTGGTACGTTTCTCGTTTGGCCACT GAAGCTACAGAAAGTGGACGGGTTAACGATCCAAATCGACGGCGTTCTTC AAGCACCGTTGATGAAGCAATGGACAACTCCTTACCCATACTCGTACTTT GAGATTGAAAGTTCATCCAACTTTTCTCTCATAGGAAGTGGAGTGATTGA TGGAAATGGTGCTGACTGGTGGGAAGCACGCCATAACGGTCTGGATGAGG CGCCAAAACTACTCTACTTTTCGTCCATGACCTCTTCCATAGTGGCCAAC ATCTTGCTCCGAAACTCACCCATGTTTCACTTTGTCATCAAGGAATCCAC TGACATAGAAGTAGCTGATGTACATGCCAACTCTCCCTGCGACTCTCCCA ACACAGATTTCATTGACCCTGGCTCCTCATCCAATTTGTACTTCCATGGT TGCCGCATCACCAATGGTGATGACTGTGTCGCGATCAAAGAAGGTAACTA CCACTACCAACCCCCCCCCTTCCCCCCTTTCCCTCCCCTCCCTCCTCCAC CTTCTCCTATCCCTACCCCCCTTTTCCCCTTGTCCTCACAGAAACATACA ACATAGTCGTGGAGGACTTTGTGTGCAATTGCTCCCATGGCATTTCCATC GGATCACTTGGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig80366:138..949+

>mRNA_M-pyrifera_M_contig80366.18827.1 ID=mRNA_M-pyrifera_M_contig80366.18827.1|Name=mRNA_M-pyrifera_M_contig80366.18827.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig80366:138..949+ (Macrocystis pyrifera P11B4 male)
ATGCGCTTTTTGCTGGTGATTTTCCTTCTTTGTATTACTACGGCACATGG
AAGGTTGGTGTGTAACCCTTTGGACCACGGAGCAAAAGGAGATGGCAAGA
GCAACGACACTACTGCATTTCTCGCGGCTGTTGGCAATTGTACCGGTGTT
TCTGGTGCATCTGTACTTGTGCCTAGTGGTACGTTTCTCGTTTGGCCACT
GAAGCTACAGAAAGTGGACGGGTTAACGATCCAAATCGACGGCGTTCTTC
AAGCACCGTTGATGAAGCAATGGACAACTCCTTACCCATACTCGTACTTT
GAGATTGAAAGTTCATCCAACTTTTCTCTCATAGGAAGTGGAGTGATTGA
TGGAAATGGTGCTGACTGGTGGGAAGCACGCCATAACGGTCTGGATGAGG
CGCCAAAACTACTCTACTTTTCGTCCATGACCTCTTCCATAGTGGCCAAC
ATCTTGCTCCGAAACTCACCCATGTTTCACTTTGTCATCAAGGAATCCAC
TGACATAGAAGTAGCTGATGTACATGCCAACTCTCCCTGCGACTCTCCCA
ACACAGATTTCATTGACCCTGGCTCCTCATCCAATTTGTACTTCCATGGT
TGCCGCATCACCAATGGTGATGACTGTGTCGCGATCAAAGAAGATGCGCT
TTTTGCTGGTGATTTTCCTTCTTTGTATTACTACGGCACATGGAAGGTTG
GTGTGTAACCCTTTGGACCACGGAGCAAAAGGAGATGGCAAGAGCAACGA
CACTACTGCATTTCTCGCGGCTGTTGGCAATTGTACCGGTGTTTCTGGTG
CATCTGTACTTGTGCCTAGTGGTACGTTTCTCGTTTGGCCACTGAAGCTA
CAGAAAGTGGACGGGTTAACGATCCAAATCGACGGCGTTCTTCAAGCACC
GTTGATGAAGCAATGGACAACTCCTTACCCATACTCGTACTTTGAGATTG
AAAGTTCATCCAACTTTTCTCTCATAGGAAGTGGAGTGATTGATGGAAAT
GGTGCTGACTGGTGGGAAGCACGCCATAACGGTCTGGATGAGGCGCCAAA
ACTACTCTACTTTTCGTCCATGACCTCTTCCATAGTGGCCAACATCTTGC
TCCGAAACTCACCCATGTTTCACTTTGTCATCAAGGAATCCACTGACATA
GAAGTAGCTGATGTACATGCCAACTCTCCCTGCGACTCTCCCAACACAGA
TTTCATTGACCCTGGCTCCTCATCCAATTTGTACTTCCATGGTTGCCGCA
TCACCAATGGTGATGACTGTGTCGCGATCAAAGAAGAAACATACAACATA
GTCGTGGAGGACTTTGTGTGCAATTGCTCCCATGGCATTTCCATCGGATC
ACTTGGTAAACATACAACATAGTCGTGGAGGACTTTGTGTGCAATTGCTC
CCATGGCATTTCCATCGGATCACTTGGT
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