prot_M-pyrifera_M_contig80366.18827.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80366.18827.1
Unique Nameprot_M-pyrifera_M_contig80366.18827.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length238
Homology
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: UPI001C265E59 (probable polygalacturonase At1g80170 isoform X3 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C265E59)

HSP 1 Score: 147 bits (370), Expect = 1.240e-38
Identity = 89/222 (40.09%), Postives = 124/222 (55.86%), Query Frame = 0
Query:   27 GAKGDGKSNDTTAFLAAVGNCTGVSGASV-LVPSGT-FLVWPLKLQK--VDGLTIQIDGVLQAPL-MKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEA-----RHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 238
            GAKGDG S+DT AF+ A        G+S+ LVP G  +LV   K +      LTIQI+G + AP  ++ W   +P  +    + SN S  G GVIDG+G+ WW A     + N    AP  L   S +S  V ++ +RN+   HF+I  S  + V+ V  ++P DSPNTD I    S+N+    C+I  GDDC++I  E+ NI +++  C   HGISIGSLG
Sbjct:   57 GAKGDGVSDDTKAFVNAWKKACSKQGSSIFLVPKGKRYLVSATKFKGPCAGMLTIQIEGTIVAPDDIETWDPDFPRMWLGYYNLSNVSFEGKGVIDGSGSKWWAASCKRNKSNPCRGAPTALTIDSSSSVNVKDLTIRNAQQMHFIIGRSDSVRVSGVTISAPGDSPNTDGIHVTGSTNVVLQDCKIGTGDDCISIVSESSNIKMKNIYCGPGHGISIGSLG 278          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: UPI00126330E6 (probable polygalacturonase At3g15720 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI00126330E6)

HSP 1 Score: 137 bits (346), Expect = 7.690e-35
Identity = 78/225 (34.67%), Postives = 121/225 (53.78%), Query Frame = 0
Query:   20 VCNPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGAS--VLVPSG-TFLVWPLKLQ---KVDGLTIQIDGVLQAPLMKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEARHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 238
            V N +  GA GDG+ +D+ AFL A     G +  +  +L+P+G TFL+ P+K Q       +  +I G + AP M  W      ++   E+ +   + G+G IDG GA WW+ + +  ++ P  L F+  T+  +  +   NSP  H  +    ++ ++ ++  +P  SPNTD ID G + N+Y H C I  GDDC+AI  E++N  +    C   HGISIGSLG
Sbjct:   40 VVNVMKMGAVGDGRKDDSQAFLRAWAAVCGANKTAPLLLIPAGRTFLLKPVKFQGPCTSSAINFKILGNIMAPDMTAWKGDDRQNWLVFENINWLKIDGNGQIDGRGASWWQ-QESEPEKRPAALTFNKCTNLRLNQLKHINSPRNHITVTGCRNVVISHLNITAPGSSPNTDGIDIGQTRNVYIHDCNIETGDDCIAIGTESFNFKISHVTCGPGHGISIGSLG 263          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: A0A5J9UCW7_9POAL (Uncharacterized protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UCW7_9POAL)

HSP 1 Score: 135 bits (341), Expect = 3.100e-34
Identity = 94/243 (38.68%), Postives = 134/243 (55.14%), Query Frame = 0
Query:    6 VIFLLCITTAHGR-LVCNPLDHGAKGDGKSNDTTAFLA---AVGNCTGVSGASVLVPSG-TFLVWPLKLQKV--DGLTIQIDGVLQAPLMKQWTTPYP--YSYFEIESSSNFSLIGSGVIDGNGADWWEA-RHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 238
            V+ +L I  A GR    N LD  A GDG+++DT AFL    A  NC   S   ++VP G TFL+  +K +      +T+Q+DG + AP  K WT+      ++  ++S    +L G+GVIDG GA WW+   H   D  P LL F+   + +V +I L +S   H  + + + ++V +V   +P DSPNTD I   SS+N+    C I  GDDCV+I   T N+ V +  C   HGIS+GSLG
Sbjct:   13 VLLVLVIRWAEGRPQKYNVLDFHAFGDGETDDTEAFLRTWQAACNCR--SQPVMVVPGGRTFLLAQIKFEGPCKSPITVQLDGKIVAP-NKIWTSEEANLLTFCRVDS---LTLDGNGVIDGQGAIWWDCYNHKRCDNRPILLGFAFCNNLVVKSINLTDSADKHMTLFQCSQVQVYNVSITAPGDSPNTDGITMASSNNISISSCFIQTGDDCVSILSHTTNVNVTNCTCGPGHGISVGSLG 249          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: UPI000900C6CA (probable polygalacturonase At3g15720 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000900C6CA)

HSP 1 Score: 135 bits (341), Expect = 3.440e-34
Identity = 82/224 (36.61%), Postives = 122/224 (54.46%), Query Frame = 0
Query:   22 NPLDHGAKGDGKSNDTTAFLAAVG-NCTG-VSGASVLVPSG-TFLVWPLKLQ---KVDGLTIQIDGVLQAPL-MKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEARHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 238
            N LD GAKGDG+++D+TAF+ A    C G  +  ++L+PSG TFL+ P+      K   + IQ+DGV+ AP  +  W+ P    +    S     + GSG IDG G+ +WE +   + + P  L  +   +  +  I   NSP  H  IK    + ++ ++  +P  SPNTD ID  +S+N+      I  GDDC+AIK  ++NI +    C   HGIS+GSLG
Sbjct:   29 NVLDFGAKGDGQTDDSTAFVQAWNATCRGDENNTTLLIPSGQTFLLQPIVFNGPCKSTSIKIQLDGVIIAPSNITAWSNPKSQMWIGFSSIFGLVVDGSGKIDGGGSSFWELKLK-VSQRPTALRINRCNNLTIKGISSINSPKTHLSIKSCNYVAISKINLLAPETSPNTDGIDISNSTNINIFDSTIQTGDDCIAIKTGSFNINITQINCGPGHGISVGSLG 251          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: UPI001FB186F8 (polygalacturonase At1g48100-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB186F8)

HSP 1 Score: 135 bits (340), Expect = 9.430e-34
Identity = 81/230 (35.22%), Postives = 118/230 (51.30%), Query Frame = 0
Query:   22 NPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLVPSG-TFLVWPLKLQKVD---GLTIQIDGVLQAPLMKQ-WTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWW--EARHNGLDEA------PKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 238
            N LD+GAKGDG S++T AFLAA  +   +  + +LVPSG  FLV P+     +    +  Q+DG + AP     W + +   + E ++    ++ G G IDG G+ WW      NG          P  L F   T   V  I ++NSP  H      T ++V+D+  +SP +SPNTD I   ++ N+      +  GDDC++I+    N+ + D  C   HGISIGSLG
Sbjct:   54 NVLDYGAKGDGNSDETKAFLAAWEDVCQMDESIMLVPSGYVFLVQPISFVVPNCGSNIIFQLDGTIIAPTSSSAWGSGF-LQWIEFKNLKGITIRGKGTIDGQGSVWWTNSRNENGASSENLPNTKPTALRFYGSTDITVTGIKIQNSPQTHLKFDSCTKVKVSDITVSSPSNSPNTDGIHLQNTQNVLIQTSTLACGDDCISIQTGCSNVYIHDITCGPGHGISIGSLG 282          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: D8S8U4_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S8U4_SELML)

HSP 1 Score: 134 bits (338), Expect = 1.110e-33
Identity = 88/232 (37.93%), Postives = 127/232 (54.74%), Query Frame = 0
Query:   22 NPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLVPSG-TFLVWPLKLQK--VDGLTIQIDGVLQAPL--MKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWE--ARHNGL---DEAPKLLYFSSMTSSIVANILLR-----NSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 238
            N ++ GA+GDG S+D+ AFLAA         A++LVP G  F+V  L L       L ++IDG++ A    M  W+     ++  I    +FS+ G G+IDG G +WW    R N     D + +L  F +  SS  ANI ++     NSP  H  I+ES+++ +  V   +P DSPNTD I    S+N+    C I  GDDC++I + T N+V+ + +C   HGISIGSLG
Sbjct:   29 NVVEFGARGDGLSDDSQAFLAAWKRACHTENATMLVPGGKAFVVNYLLLTGPCATNLRLKIDGIVLADTRDMIHWSNIT--TWISIARVYDFSVEGYGIIDGQGEEWWRISCRRNSSYVSDSSYRLYSFLTFDSS--ANITIQDLKFVNSPQMHLAIEESSNVSIKGVEILAPHDSPNTDGIHLHMSNNVSIEKCIIGTGDDCISIAKNTSNVVIREIICGPGHGISIGSLG 256          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: UPI0011E04BCB (polygalacturonase At1g48100 n=1 Tax=Cannabis sativa TaxID=3483 RepID=UPI0011E04BCB)

HSP 1 Score: 135 bits (341), Expect = 1.250e-33
Identity = 89/232 (38.36%), Postives = 124/232 (53.45%), Query Frame = 0
Query:   20 VCNPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLVPSG-TFLVWPLKLQK--VDGLTIQIDGVLQAP-LMKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWW--------EARHNGL-DEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 238
            + N L  GAKGDG S+D+ A LAA      VSGA+V++PS   FL+ P+ LQ   +  L  QIDG L AP  +  W     + +   +  +NF++ G+GV+DG G++WW        + +   + D  P  L F S     V NI + NSP  H     S  I+V ++  +SP +SPNTD I   +S ++  H   I  GDDCV+I+    N+ V    C   HGISIGSLG
Sbjct:   83 IFNVLSFGAKGDGVSDDSKALLAAWEGACKVSGATVIIPSKYKFLIKPIILQGPCMPHLIFQIDGTLLAPPKIGSWQKYNLFQWIYFKWINNFTIQGTGVVDGQGSNWWCLSQVYNTQKKSKYIPDMKPTALRFYSSNDVTVKNIKIINSPQCHLKFDSSKRIKVDNITISSPENSPNTDGIHLQNSQDVEIHHSNIGCGDDCVSIQTGCSNVHVHHINCGPGHGISIGSLG 314          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: A0A087HH58_ARAAL (NAC domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HH58_ARAAL)

HSP 1 Score: 136 bits (342), Expect = 1.930e-33
Identity = 88/238 (36.97%), Postives = 121/238 (50.84%), Query Frame = 0
Query:   11 CITTAH-GRLVCNPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLVPSGT-FLVWPLKLQKV--DGLTIQIDGVLQAPL-MKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEA-----RHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 238
            C+T+ + G+ + N    GA GDG S+DT AF +A         + +LVP G  +LV   K      + L IQIDG + AP    QW   +   + E       +  G+GVIDG+GA WW A     + N    AP  L   S +   V  + +RNS   H  I  S  + ++ V   SP DSPNTD I   +S+N+    C+I+ GDDCV+I  E+  I ++   C   HGISIGSLG
Sbjct:   44 CLTSQNSGKNLVNVDSFGAVGDGVSDDTQAFTSAWKIACSAPKSVLLVPQGRRYLVNATKFNGPCQEKLIIQIDGTIVAPDDPSQWNPRFQRVWLEFTKLQGVAFQGNGVIDGSGAKWWAASCKKNKTNPCIGAPTALTIDSSSGVYVRGLTIRNSQQMHMSISRSNTVRISRVMVTSPGDSPNTDGIHITASTNVVVQDCKISTGDDCVSIVNESTRIKMKKIYCGPGHGISIGSLG 281          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: J3KWV0_ORYBR (Uncharacterized protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3KWV0_ORYBR)

HSP 1 Score: 134 bits (336), Expect = 3.920e-33
Identity = 96/244 (39.34%), Postives = 127/244 (52.05%), Query Frame = 0
Query:    3 FLLVIFLLCITT-AHGRLVCNPLDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLV-PSG-TFLVWPLKLQKVDG-----LTIQIDGVLQAPLMKQWTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEARHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 238
            FLLV+ L  + + A  R   N LD  A GDGKS+DT AFLAA        G  +L+ P G TFL   LK     G     + IQ+DG + AP    WT+    +     S  N +L G+G IDG GA WW           KLL F+   +  V NI L NSP+ H ++   + + V +V  N+P DSPNTD I    S ++Y   C I +GDDCV++   T ++ + D  C   HGIS+GSLG
Sbjct:   72 FLLVLALRSVRSEALKRPSHNVLDFNAAGDGKSDDTQAFLAAWEQTCNDDGWPILIIPGGRTFL---LKQVTFSGSCKSPIMIQVDGNIVAPNYI-WTSEQD-NLITFYSVDNLTLEGNGQIDGKGAIWWTCY------TQKLLAFAQCNNLSVRNIHLTNSPIKHMILFRCSQVHVYNVSINAPGDSPNTDGITMAISDHVYISNCSIQSGDDCVSMLSHTTDVNITDTRCGPGHGISVGSLG 304          
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Match: M5Y240_PRUPE (Uncharacterized protein n=7 Tax=Prunus TaxID=3754 RepID=M5Y240_PRUPE)

HSP 1 Score: 134 bits (336), Expect = 5.210e-33
Identity = 83/226 (36.73%), Postives = 118/226 (52.21%), Query Frame = 0
Query:   24 LDHGAKGDGKSNDTTAFLAAVGNCTGVSGASVLVPSG-TFLVWPLKLQK---VDGLTIQIDGVLQAPLMKQ-WTTPYPYSYFEIESSSNFSLIGSGVIDGNGADWWEA------RHNGLDEAPKLLYFSSMTSSIVANILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHGCRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG 238
            L  GAKGDG S+D+ A +AA      V GA+V +PSG  FL+ P+ L     +  L +QIDG L AP     W     + +   + + NF++ G+G++DG G+DWW +      +H   D  P  L F   +   V NI + NSP  H     S+ I+V ++   SP  SPNTD I   ++ N+  H   I  GDDCV+I+    N+ +    C   HGIS+G LG
Sbjct:   77 LSFGAKGDGVSDDSKALVAAWEAACRVKGATVEIPSGFKFLIQPITLDGSGCMPDLVLQIDGTLLAPSKASTWPESSLFQWINFKYARNFTIQGTGIVDGQGSDWWNSSAHKRSKHTP-DTKPTALRFYFSSDVTVRNIKIINSPQCHLKFDNSSWIKVNNITITSPDYSPNTDGIHLQNTQNVEIHHSTIGCGDDCVSIQTGCSNVHIHHVKCGPGHGISLGGLG 301          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80366.18827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C265E591.240e-3840.09probable polygalacturonase At1g80170 isoform X3 n=... [more]
UPI00126330E67.690e-3534.67probable polygalacturonase At3g15720 n=1 Tax=Pista... [more]
A0A5J9UCW7_9POAL3.100e-3438.68Uncharacterized protein (Fragment) n=1 Tax=Eragros... [more]
UPI000900C6CA3.440e-3436.61probable polygalacturonase At3g15720 n=1 Tax=Camel... [more]
UPI001FB186F89.430e-3435.22polygalacturonase At1g48100-like n=1 Tax=Impatiens... [more]
D8S8U4_SELML1.110e-3337.93Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
UPI0011E04BCB1.250e-3338.36polygalacturonase At1g48100 n=1 Tax=Cannabis sativ... [more]
A0A087HH58_ARAAL1.930e-3336.97NAC domain-containing protein n=1 Tax=Arabis alpin... [more]
J3KWV0_ORYBR3.920e-3339.34Uncharacterized protein n=1 Tax=Oryza brachyantha ... [more]
M5Y240_PRUPE5.210e-3336.73Uncharacterized protein n=7 Tax=Prunus TaxID=3754 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 47..238
e-value: 1.3E-42
score: 146.0
IPR000743Glycoside hydrolase, family 28PROSITEPS00502POLYGALACTURONASEcoord: 223..236
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 9..238
e-value: 2.5E-66
score: 226.3
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 6..238
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..238
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..17
score: 0.901
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 4..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80366contigM-pyrifera_M_contig80366:138..949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80366.18827.1mRNA_M-pyrifera_M_contig80366.18827.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80366 138..949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80366.18827.1 ID=prot_M-pyrifera_M_contig80366.18827.1|Name=mRNA_M-pyrifera_M_contig80366.18827.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp
MRFLLVIFLLCITTAHGRLVCNPLDHGAKGDGKSNDTTAFLAAVGNCTGV
SGASVLVPSGTFLVWPLKLQKVDGLTIQIDGVLQAPLMKQWTTPYPYSYF
EIESSSNFSLIGSGVIDGNGADWWEARHNGLDEAPKLLYFSSMTSSIVAN
ILLRNSPMFHFVIKESTDIEVADVHANSPCDSPNTDFIDPGSSSNLYFHG
CRITNGDDCVAIKEETYNIVVEDFVCNCSHGISIGSLG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000743Glyco_hydro_28
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence