mRNA_M-pyrifera_M_contig8031.18817.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: D7G468_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G468_ECTSI) HSP 1 Score: 184 bits (467), Expect = 3.870e-55 Identity = 94/123 (76.42%), Postives = 105/123 (85.37%), Query Frame = 1 Query: 16 FLNLLSAGCVVFPGPYQVNGVPLRRVNQAYVIATSMKVDLSKVTIPVADDSYFTRVSAAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 384 FL L +G ++ GPY VNGVP+RRVNQAYVIATSM VD+SKVTIP ADDSYFTR A KT+EDQFFEQGAK STVSDKRKADQK VDAG+LA++ P+LKAYLNAKFSLKKGDRPHEM+F Sbjct: 58 FLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPAADDSYFTREEVATKTDEDQFFEQGAKSSTVSDKRKADQKTVDAGVLAAMT-NPMLKAYLNAKFSLKKGDRPHEMIF 179
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: A0A835YT51_9STRA (60S ribosomal protein L6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT51_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.060e-42 Identity = 77/123 (62.60%), Postives = 95/123 (77.24%), Query Frame = 1 Query: 16 FLNLLSAGCVVFPGPYQVNGVPLRRVNQAYVIATSMKVDLSKVTIPVADDSYFTRVSAAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 384 FL +++G ++ GPY+VNGVPLRRVNQAYVIATS K+D+SKV + DD+YF R AKKT ED FF Q +K S VSD++K DQ +VDA ILA ++ + LLKAYLNAKFSL K DRPHEM+F Sbjct: 63 FLKQMASGTLLVTGPYKVNGVPLRRVNQAYVIATSTKLDVSKVDVSAIDDAYFARAPEAKKTAEDAFFAQASKESVVSDQKKKDQDVVDASILAGLSKDKLLKAYLNAKFSLTKKDRPHEMVF 185
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: A0A5D6Y3Z6_9STRA (60S ribosomal protein L6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3Z6_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.950e-38 Identity = 73/124 (58.87%), Postives = 91/124 (73.39%), Query Frame = 1 Query: 16 FLNLLSAGCVVFPGPYQVNGVPLRRVNQAYVIATSMKVDLSKVTIPVADDSYFTRVS-AAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 384 FL L +GC++ GPY+VNGVPLRRVNQ+YVIATS KVDL V +P +D+YF + ++KK++E+QFF Q A + D+RK DQK VDA +L V AEPLLKAYLNAKFSL K DR H + F Sbjct: 106 FLKQLESGCLLVTGPYKVNGVPLRRVNQSYVIATSTKVDLEGVKLPEINDAYFAKEKVSSKKSKEEQFFAQSASAPVIPDQRKKDQKAVDAALLKKVEAEPLLKAYLNAKFSLTKNDRAHALKF 229
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: D0MZV7_PHYIT (60S ribosomal protein L6 n=12 Tax=Phytophthora TaxID=4783 RepID=D0MZV7_PHYIT) HSP 1 Score: 139 bits (349), Expect = 7.150e-37 Identity = 66/123 (53.66%), Postives = 91/123 (73.98%), Query Frame = 1 Query: 16 FLNLLSAGCVVFPGPYQVNGVPLRRVNQAYVIATSMKVDLSKVTIPVADDSYFTRVSAAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 384 FLN L++G ++ GPY+VNGVPLRRVNQ+YVIATS KV++ + +P DD+YF + AAKK++E+QFF Q + + ++RK DQK VD+ ++ + AEP LK+YLNAKFSL K DR H + F Sbjct: 98 FLNQLASGLLLVTGPYKVNGVPLRRVNQSYVIATSTKVNIEGLALPAIDDAYFAKEKAAKKSKEEQFFAQSSTAPVIPEQRKKDQKAVDSALIKKLEAEPFLKSYLNAKFSLTKNDRAHALKF 220
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: K3W6W0_GLOUD (60S ribosomal protein L6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6W0_GLOUD) HSP 1 Score: 139 bits (349), Expect = 9.650e-37 Identity = 71/124 (57.26%), Postives = 90/124 (72.58%), Query Frame = 1 Query: 16 FLNLLSAGCVVFPGPYQVNGVPLRRVNQAYVIATSMKVDLSKVTIPVADDSYFTRVS-AAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 384 FL L +G ++ GPY+VNGVPLRRVNQAYVIATS KVDL V++P +D+YF + ++KKT+E+QFF Q A + D+RK DQK VDA ++ + AEP LKAYLNAKFSL K DR H + F Sbjct: 108 FLKQLESGLLLVTGPYKVNGVPLRRVNQAYVIATSTKVDLEGVSLPEINDAYFAKEKVSSKKTKEEQFFAQSAAAPVIPDQRKKDQKAVDAALIKKIDAEPFLKAYLNAKFSLTKNDRAHALKF 231
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: A0A7S1U5W8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5W8_9STRA) HSP 1 Score: 137 bits (346), Expect = 3.430e-36 Identity = 71/123 (57.72%), Postives = 89/123 (72.36%), Query Frame = 1 Query: 16 FLNLLSAGCVVFPGPYQVNGVPLRRVNQAYVIATSMKVDLSKVTIPVADDSYFTRVSAAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 384 FL LS+G ++ GPY+VNGVPLRRVNQAYVIATS+ VDL+ V++P DD +F R KT+E+QFF + VS RK QK VDAGILA+V PLL+AYL A+FSL+ GD+PH+M F Sbjct: 118 FLKQLSSGTLLVTGPYKVNGVPLRRVNQAYVIATSVVVDLAGVSLPDIDDEFFAREKKESKTDEEQFFSNEPTATVVSQARKDAQKAVDAGILAAVKKVPLLQAYLGARFSLRNGDKPHKMKF 240
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: A0A0P1B5I3_PLAHL (60S ribosomal protein L6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5I3_PLAHL) HSP 1 Score: 137 bits (344), Expect = 4.320e-36 Identity = 67/123 (54.47%), Postives = 89/123 (72.36%), Query Frame = 1 Query: 16 FLNLLSAGCVVFPGPYQVNGVPLRRVNQAYVIATSMKVDLSKVTIPVADDSYFTRVSAAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 384 FL L++G ++ GPY+VNGVP+RRVNQ+YVIATS KV++ + +P DD+YF + AAKK +EDQFF Q + + ++RK DQK VD+ +L + AEP LKAYLNAKFSL K DR H + F Sbjct: 101 FLKQLASGLLLVTGPYKVNGVPIRRVNQSYVIATSTKVNIEGLNLPAIDDAYFAKEKAAKKNKEDQFFAQSSAAPVIPEQRKQDQKAVDSVLLKKLDAEPFLKAYLNAKFSLTKNDRVHTLKF 223
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: B8CBR7_THAPS (60S ribosomal protein L6 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBR7_THAPS) HSP 1 Score: 133 bits (334), Expect = 3.800e-35 Identity = 70/123 (56.91%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 19 LNLLSAGCVVFPGPYQVNGVPLRRVNQAYVIATSMKVDLSKVTIPVADDSYFTRVSAAKKTEEDQFF-EQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 384 L L +G ++ GPY++NGVPLRRVNQAYVIATS KVD+S + DD+YF RV + E++FF AK + VSD+RKADQK VDA IL +V + PL+K YL + FSLKK DRPHEM+F Sbjct: 56 LKALESGLLLVTGPYKINGVPLRRVNQAYVIATSTKVDVSGADVSKIDDAYFARVKSDSAEGEEEFFANDAAKPAVVSDQRKADQKKVDAAILKAVESTPLMKNYLGSNFSLKKHDRPHEMIF 178
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: A0A8K1FLY4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLY4_PYTOL) HSP 1 Score: 134 bits (337), Expect = 6.220e-35 Identity = 70/126 (55.56%), Postives = 93/126 (73.81%), Query Frame = 1 Query: 16 FLNLLSAGCVVFPGPYQVNGVPLRRVNQAYVIATSMKVDLSKVTIPVADDSYFTRV-SAAKKTEEDQFFEQGAKCST--VSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 384 FL L +G ++ GPY++NGVPLRRVNQAYVIATS KVDLS VT+P DDSYF + S+ KK+ E+QF+E + ++ VS++RK DQK VD +L+ ++ EP L+ YLNAKF+L K DR HE+ F Sbjct: 108 FLKQLPSGTLLITGPYKINGVPLRRVNQAYVIATSTKVDLSDVTLPEIDDSYFVKPKSSGKKSAEEQFYESSDESTSRVVSEQRKQDQKAVDDALLSKISNEPYLRTYLNAKFTLTKNDRVHELTF 233
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: F0WZ30_9STRA (60S ribosomal protein L6 n=2 Tax=Albugo TaxID=65356 RepID=F0WZ30_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.050e-34 Identity = 71/124 (57.26%), Postives = 87/124 (70.16%), Query Frame = 1 Query: 16 FLNLLSAGCVVFPGPYQVNGVPLRRVNQAYVIATSMKVDLSKVTIPVADDSYFTRVSAAKKT-EEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 384 FL L +G ++ GPY++NGVPLRRVNQAYVIATS K+D+S V DDSYF + KK+ +EDQFFEQ +SD+R+ DQK VD ++ + AEPLLKAYLNAKFSL K D HEM F Sbjct: 104 FLKQLPSGTLLVTGPYKINGVPLRRVNQAYVIATSTKIDISGVPSIDIDDSYFAKEKVKKKSSKEDQFFEQSTSAPVISDQRRKDQKAVDEVLINQIEAEPLLKAYLNAKFSLTKKDIVHEMKF 227 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8031.18817.1 >prot_M-pyrifera_M_contig8031.18817.1 ID=prot_M-pyrifera_M_contig8031.18817.1|Name=mRNA_M-pyrifera_M_contig8031.18817.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp MKVDLSKVTIPVADDSYFTRVSAAKKTEEDQFFEQGAKCSTVSDKRKADQback to top mRNA from alignment at M-pyrifera_M_contig8031:1598..2944+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8031.18817.1 ID=mRNA_M-pyrifera_M_contig8031.18817.1|Name=mRNA_M-pyrifera_M_contig8031.18817.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1347bp|location=Sequence derived from alignment at M-pyrifera_M_contig8031:1598..2944+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8031:1598..2944+ >mRNA_M-pyrifera_M_contig8031.18817.1 ID=mRNA_M-pyrifera_M_contig8031.18817.1|Name=mRNA_M-pyrifera_M_contig8031.18817.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig8031:1598..2944+ (Macrocystis pyrifera P11B4 male)back to top |