prot_M-pyrifera_M_contig8031.18817.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8031.18817.1
Unique Nameprot_M-pyrifera_M_contig8031.18817.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length89
Homology
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: D7G468_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G468_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 3.340e-39
Identity = 70/88 (79.55%), Postives = 77/88 (87.50%), Query Frame = 0
Query:    1 MKVDLSKVTIPVADDSYFTRVSAAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 88
            M VD+SKVTIP ADDSYFTR   A KT+EDQFFEQGAK STVSDKRKADQK VDAG+LA++   P+LKAYLNAKFSLKKGDRPHEM+F
Sbjct:   93 MSVDVSKVTIPAADDSYFTREEVATKTDEDQFFEQGAKSSTVSDKRKADQKTVDAGVLAAMT-NPMLKAYLNAKFSLKKGDRPHEMIF 179          
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: A0A835YT51_9STRA (60S ribosomal protein L6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT51_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.020e-26
Identity = 53/87 (60.92%), Postives = 65/87 (74.71%), Query Frame = 0
Query:    2 KVDLSKVTIPVADDSYFTRVSAAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 88
            K+D+SKV +   DD+YF R   AKKT ED FF Q +K S VSD++K DQ +VDA ILA ++ + LLKAYLNAKFSL K DRPHEM+F
Sbjct:   99 KLDVSKVDVSAIDDAYFARAPEAKKTAEDAFFAQASKESVVSDQKKKDQDVVDASILAGLSKDKLLKAYLNAKFSLTKKDRPHEMVF 185          
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: A0A5D6Y3Z6_9STRA (60S ribosomal protein L6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3Z6_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 6.880e-21
Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    2 KVDLSKVTIPVADDSYFTRVS-AAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 88
            KVDL  V +P  +D+YF +   ++KK++E+QFF Q A    + D+RK DQK VDA +L  V AEPLLKAYLNAKFSL K DR H + F
Sbjct:  142 KVDLEGVKLPEINDAYFAKEKVSSKKSKEEQFFAQSASAPVIPDQRKKDQKAVDAALLKKVEAEPLLKAYLNAKFSLTKNDRAHALKF 229          
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: A0A7S4V8G6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V8G6_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.670e-20
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    3 VDLSKVTIPVADDSYFTRVSAAKKTEEDQFF-EQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 88
            VD+S + +   DD+YF R +++ +  ED+FF    AK + VS+ RKADQK VDA +L +V A P+LK YLNAKFSL KGD+PH+M+F
Sbjct:  136 VDVSAIDVSAIDDAYFARAASSGEEGEDEFFANDAAKPAVVSETRKADQKKVDAALLKAVEAVPMLKQYLNAKFSLSKGDKPHKMVF 222          
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: K3W6W0_GLOUD (60S ribosomal protein L6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6W0_GLOUD)

HSP 1 Score: 90.5 bits (223), Expect = 2.000e-20
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    2 KVDLSKVTIPVADDSYFTRVS-AAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 88
            KVDL  V++P  +D+YF +   ++KKT+E+QFF Q A    + D+RK DQK VDA ++  + AEP LKAYLNAKFSL K DR H + F
Sbjct:  144 KVDLEGVSLPEINDAYFAKEKVSSKKTKEEQFFAQSAAAPVIPDQRKKDQKAVDAALIKKIDAEPFLKAYLNAKFSLTKNDRAHALKF 231          
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: A0A0P1B5I3_PLAHL (60S ribosomal protein L6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5I3_PLAHL)

HSP 1 Score: 90.1 bits (222), Expect = 2.400e-20
Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    2 KVDLSKVTIPVADDSYFTRVSAAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 88
            KV++  + +P  DD+YF +  AAKK +EDQFF Q +    + ++RK DQK VD+ +L  + AEP LKAYLNAKFSL K DR H + F
Sbjct:  137 KVNIEGLNLPAIDDAYFAKEKAAKKNKEDQFFAQSSAAPVIPEQRKQDQKAVDSVLLKKLDAEPFLKAYLNAKFSLTKNDRVHTLKF 223          
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: D0MZV7_PHYIT (60S ribosomal protein L6 n=12 Tax=Phytophthora TaxID=4783 RepID=D0MZV7_PHYIT)

HSP 1 Score: 89.0 bits (219), Expect = 6.310e-20
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    2 KVDLSKVTIPVADDSYFTRVSAAKKTEEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 88
            KV++  + +P  DD+YF +  AAKK++E+QFF Q +    + ++RK DQK VD+ ++  + AEP LK+YLNAKFSL K DR H + F
Sbjct:  134 KVNIEGLALPAIDDAYFAKEKAAKKSKEEQFFAQSSTAPVIPEQRKKDQKAVDSALIKKLEAEPFLKSYLNAKFSLTKNDRAHALKF 220          
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: B8CBR7_THAPS (60S ribosomal protein L6 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBR7_THAPS)

HSP 1 Score: 87.0 bits (214), Expect = 1.420e-19
Identity = 47/88 (53.41%), Postives = 60/88 (68.18%), Query Frame = 0
Query:    2 KVDLSKVTIPVADDSYFTRVSAAKKTEEDQFF-EQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 88
            KVD+S   +   DD+YF RV +     E++FF    AK + VSD+RKADQK VDA IL +V + PL+K YL + FSLKK DRPHEM+F
Sbjct:   91 KVDVSGADVSKIDDAYFARVKSDSAEGEEEFFANDAAKPAVVSDQRKADQKKVDAAILKAVESTPLMKNYLGSNFSLKKHDRPHEMIF 178          
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: A0A8K1FLY4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLY4_PYTOL)

HSP 1 Score: 86.3 bits (212), Expect = 8.860e-19
Identity = 46/90 (51.11%), Postives = 64/90 (71.11%), Query Frame = 0
Query:    2 KVDLSKVTIPVADDSYFTRV-SAAKKTEEDQFFEQGAKCST--VSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 88
            KVDLS VT+P  DDSYF +  S+ KK+ E+QF+E   + ++  VS++RK DQK VD  +L+ ++ EP L+ YLNAKF+L K DR HE+ F
Sbjct:  144 KVDLSDVTLPEIDDSYFVKPKSSGKKSAEEQFYESSDESTSRVVSEQRKQDQKAVDDALLSKISNEPYLRTYLNAKFTLTKNDRVHELTF 233          
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Match: F0WZ30_9STRA (60S ribosomal protein L6 n=2 Tax=Albugo TaxID=65356 RepID=F0WZ30_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.110e-18
Identity = 47/88 (53.41%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    2 KVDLSKVTIPVADDSYFTRVSAAKKT-EEDQFFEQGAKCSTVSDKRKADQKIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF 88
            K+D+S V     DDSYF +    KK+ +EDQFFEQ      +SD+R+ DQK VD  ++  + AEPLLKAYLNAKFSL K D  HEM F
Sbjct:  140 KIDISGVPSIDIDDSYFAKEKVKKKSSKEDQFFEQSTSAPVISDQRRKDQKAVDEVLINQIEAEPLLKAYLNAKFSLTKKDIVHEMKF 227          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8031.18817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G468_ECTSI3.340e-3979.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YT51_9STRA2.020e-2660.9260S ribosomal protein L6 n=1 Tax=Tribonema minus T... [more]
A0A5D6Y3Z6_9STRA6.880e-2154.5560S ribosomal protein L6 n=1 Tax=Pythium brassicum... [more]
A0A7S4V8G6_9STRA1.670e-2052.87Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K3W6W0_GLOUD2.000e-2052.2760S ribosomal protein L6 n=1 Tax=Globisporangium u... [more]
A0A0P1B5I3_PLAHL2.400e-2050.5760S ribosomal protein L6 n=1 Tax=Plasmopara halste... [more]
D0MZV7_PHYIT6.310e-2047.1360S ribosomal protein L6 n=12 Tax=Phytophthora Tax... [more]
B8CBR7_THAPS1.420e-1953.4160S ribosomal protein L6 (Fragment) n=1 Tax=Thalas... [more]
A0A8K1FLY4_PYTOL8.860e-1951.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WZ30_9STRA1.110e-1853.4160S ribosomal protein L6 n=2 Tax=Albugo TaxID=6535... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR00091560S ribosomal protein L6EPFAMPF01159Ribosomal_L6ecoord: 2..88
e-value: 2.7E-23
score: 82.6
IPR00091560S ribosomal protein L6EPANTHERPTHR1071560S RIBOSOMAL PROTEIN L6coord: 2..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8031contigM-pyrifera_M_contig8031:1718..2556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8031.18817.1mRNA_M-pyrifera_M_contig8031.18817.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8031 1598..2944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8031.18817.1 ID=prot_M-pyrifera_M_contig8031.18817.1|Name=mRNA_M-pyrifera_M_contig8031.18817.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp
MKVDLSKVTIPVADDSYFTRVSAAKKTEEDQFFEQGAKCSTVSDKRKADQ
KIVDAGILASVAAEPLLKAYLNAKFSLKKGDRPHEMLF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR00091560S_ribosomal_L6E