mRNA_M-pyrifera_M_contig79607.18689.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A0M0JU91_9EUKA (Brf1 subunit of RNA polymerase iii transcription initiation factor iiib n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU91_9EUKA) HSP 1 Score: 191 bits (485), Expect = 7.360e-55 Identity = 93/195 (47.69%), Postives = 135/195 (69.23%), Query Frame = 1 Query: 10 FESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594 F +G+ +S A++LR+ H EAA R++++A+ N +QGRRT V+ A LY CR+E P LL+++++V+ N++ LG+ +L+ +R L L +P +DP+LY+H+FASRL G V+ +A RLV RM++DWI GRRP ICGAALL+AARVHGF +T+ ++V V D+TLR RL EF TP L+A QL Sbjct: 79 FNNGQRHISQLAAALRLAEHHQEAAQRLFMLAVQHNFIQGRRTQHVIAACLYTVCRKEKTPHLLIDYSDVLQENVYLLGSCFLKFTRLLSLTLPIIDPSLYIHRFASRLEFGDKTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLTEFAETPMGALTARQL 273
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A8J6BZU8_DIALT (B-related factor 1 n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6BZU8_DIALT) HSP 1 Score: 197 bits (502), Expect = 2.400e-54 Identity = 100/192 (52.08%), Postives = 137/192 (71.35%), Query Frame = 1 Query: 19 GRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594 GR +S A +L + SH VEAA R +L+A+ N +QGRRT VV A LYI CRRE P +L++F++V+ N+F+LG+T+L+ +R L L++P +DP+LY+H+FASRL LG + V+ A RLV RM++DWI GRRP ICGAALLVA+RVHGF +T+ ++V V D+TLR RL EFE T L+A +L Sbjct: 79 GRRKISHIAGALSLNSHHVEAAQRFFLLAVQHNFIQGRRTQHVVAACLYIVCRREKTPHMLIDFSDVLQTNVFALGSTFLKFTRLLNLQLPLIDPSLYIHRFASRLELGDKMHTVSILALRLVQRMKRDWIQTGRRPSGICGAALLVASRVHGFRRTQRELVHIVRICDVTLRKRLCEFEETACGALTAQEL 270
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A5A8DA24_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DA24_CAFRO) HSP 1 Score: 196 bits (497), Expect = 4.120e-53 Identity = 97/194 (50.00%), Postives = 135/194 (69.59%), Query Frame = 1 Query: 13 ESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594 ++G+ L L++ SH V+ A R+Y+MALS+N QGRR NVV A LY CRRE P +L++FA+ + VN+F+LG T++R +R + ++MP +DP+LY+H+FA ++ LG AV TA RLV M++DW+A GRRP ICGA LLVAAR HGF + + D++ V D T+RNRLAEFEA P A L+A Q+ Sbjct: 88 DNGKRHLHTLVGKLKLGSHHVDGALRLYIMALSKNFTQGRRANVVAAACLYTVCRRERTPHMLLDFADALRVNVFTLGHTFVRFARLVNIRMPMVDPSLYIHRFAGQMELGDKKHAVATTAMRLVQIMQRDWLAAGRRPAGICGACLLVAARAHGFRRRQEDVLRIVRVADCTVRNRLAEFEAAPVARLTAEQM 281
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: M1V3G8_CYAM1 (B-related factor 1 n=2 Tax=cellular organisms TaxID=131567 RepID=M1V3G8_CYAM1) HSP 1 Score: 195 bits (495), Expect = 4.990e-53 Identity = 95/195 (48.72%), Postives = 136/195 (69.74%), Query Frame = 1 Query: 10 FESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594 + +GR ++ AS L +P V+AA R++ +A+ N +QGRRT V A LYI CRRE P LL++F++ + +N++ LG TYL+L R L L +P +DP+ Y+H+FASRL+LG AV QTA RL++RM++DWI GRRP +CGAALL+AAR+HGF +++ +I A V D+T+R RL E E TP TL+ +L Sbjct: 332 YAAGRRRIATIASQLHLPPRFVDAAHRLFTLAVQHNFVQGRRTQTVAAAALYIVCRREKTPHLLIDFSDTLRINVYVLGHTYLKLCRVLHLALPIIDPSFYIHRFASRLDLGEKQNAVAQTALRLISRMKRDWIHTGRRPAGLCGAALLIAARMHGFRRSQREIGAVVRVGDMTIRQRLCEIEETPTGTLTGREL 526
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7J7IDI4_9RHOD (B-related factor 1 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDI4_9RHOD) HSP 1 Score: 191 bits (484), Expect = 7.440e-52 Identity = 93/195 (47.69%), Postives = 134/195 (68.72%), Query Frame = 1 Query: 10 FESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594 + +GR ++ AS L +P V+AA R++ +A+ N +QGRRT V A LYI CRRE P LL++F++ + +N++ LG TYL+L R L L +P +DP+ Y+H+FASRL G V QTA RL++RM++DWI GRRP +CGAALL++AR+HGF +++ +I A V D+T+R RL+E E TP ATL+ L Sbjct: 194 YAAGRRRIATIASQLHLPPRFVDAAHRLFTLAVQHNFVQGRRTQNVAAAALYIVCRREKTPHLLIDFSDALRINVYVLGHTYLKLCRVLHLSLPIIDPSFYIHRFASRLEFGEKQNLVAQTALRLISRMKRDWIHTGRRPAGLCGAALLISARMHGFRRSQREISAVVRVGDMTIRQRLSEIEETPTATLTGRDL 388
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7S3ZRV4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRV4_9STRA) HSP 1 Score: 187 bits (474), Expect = 9.790e-52 Identity = 92/188 (48.94%), Postives = 135/188 (71.81%), Query Frame = 1 Query: 19 GRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLS 582 G+ + A+SLR+ H V+ A R++ +A RN QGR+T VV A LY+ CRRE +LV+F++V+ VN++SLGAT+L+ R L L++P +DP+LY+H+FA++L LG A AV TA ++V RM++DWI GRRP +C AALLV+AR HGF +T+ D+V+A+ +T+ RLA+F+ATPAA L+ Sbjct: 96 GKRKIEQVANSLRLGQHYVDGADRIFKLAAQRNFTQGRKTLHVVCACLYVMCRREKSAHMLVDFSDVLQVNVYSLGATFLKFRRVLNLELPLVDPSLYIHRFAAKLELGDAASAVGATALKVVQRMKRDWIETGRRPAGVCAAALLVSARAHGFHRTQQDVVSALRVCGMTVSKRLADFQATPAAQLT 283
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7S4BVT8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BVT8_CHRCT) HSP 1 Score: 182 bits (462), Expect = 3.320e-51 Identity = 90/195 (46.15%), Postives = 133/195 (68.21%), Query Frame = 1 Query: 10 FESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594 F +G+ +S A++LR+ H EAA+R++ +A+ N +QGR+T V+ A LY CRRE LL+++++V+ N++ LG+ +L+ +R L L +P +DP+LY+H+FAS+L G V+ +A RLV RM++DWI GRRP ICGAALL+AARVHGF +T+ ++V V D+TLR RL EF T L+A QL Sbjct: 77 FANGQRHISQLAAALRLADHHQEAANRLFHLAVQHNFIQGRKTQHVIAACLYTVCRREKTAHLLIDYSDVLQTNVYLLGSCFLKFTRILSLTLPIIDPSLYIHRFASKLEFGDRTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLDEFSDTAVGVLTAQQL 271
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7S2RQN0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQN0_9STRA) HSP 1 Score: 185 bits (470), Expect = 9.020e-51 Identity = 88/192 (45.83%), Postives = 135/192 (70.31%), Query Frame = 1 Query: 19 GRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594 G++ ++ A LR+ +H +++A R++ A+ RN +QGR+T VV LYI CR + P +L++F++ + VN+F+LG+ +L+ R L + P +DP+LY+H+FA+R++LG AV Q+A R+V RM++DWI GRRP IC AALL+AAR HGF +T+A++V + +T+R RL EFEATPAA L+ QL Sbjct: 82 GKASIAEVAGRLRLQNHYIDSAHRLFTFAVQRNFVQGRKTMHVVAVCLYIKCREDKSPHMLIDFSDALSVNVFTLGSCFLKFCRLLSIDTPLIDPSLYIHRFAARMDLGAKTQAVAQSALRIVARMKRDWIQTGRRPAGICAAALLIAARTHGFPRTQAEVVKILRVCGMTVRTRLEEFEATPAAQLTMDQL 273
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: F0YC94_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC94_AURAN) HSP 1 Score: 187 bits (476), Expect = 2.320e-50 Identity = 94/191 (49.21%), Postives = 135/191 (70.68%), Query Frame = 1 Query: 19 GRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQ 591 GR ++ ASSLR+ +H V+ A R++ MA RN QGR+T VV A LY+ CRRE +L++F++V+ VN+++LGAT+L+ R L L++P +DP+LY+H+FA++L LG AV TA R+V RM++DWI GRRP +C AALLV AR HGF +T+ D+V A+ +T+ RLA+F+ATPAA LS + Sbjct: 487 GRRKIAQVASSLRLGAHFVDGAHRLFGMAAQRNFTQGRKTLHVVCACLYVMCRREKSAHMLIDFSDVLQVNVYALGATFLKFRRLLNLELPIIDPSLYIHRFAAKLELGDKCGAVATTALRVVQRMKRDWIETGRRPAGVCAAALLVGARAHGFHRTQDDVVKALRVCGMTVAKRLADFQATPAAQLSLAE 677
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7S0IX97_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IX97_9EUKA) HSP 1 Score: 181 bits (458), Expect = 3.010e-50 Identity = 89/195 (45.64%), Postives = 133/195 (68.21%), Query Frame = 1 Query: 10 FESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594 + +G+ +S A++LR+ H EAA R++ +A+ N +QGR+T V+ A LY CRRE LL+++++V+ N++ LG+ +L+ +R L L +P +DP+LY+H+FAS+L G V+ +A RLV RM++DWI GRRP ICGAALL+AARVHGF +T+ ++V V D+TLR RL EF T +L+A QL Sbjct: 76 YTNGQRHISQLAAALRLADHHQEAAQRLFNLAVQHNFIQGRKTQHVIAACLYTVCRREKTAHLLIDYSDVLQTNVYMLGSCFLKFTRLLSLTLPIIDPSLYIHRFASKLEFGDKTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLNEFGETALGSLTAQQL 270 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79607.18689.1 >prot_M-pyrifera_M_contig79607.18689.1 ID=prot_M-pyrifera_M_contig79607.18689.1|Name=mRNA_M-pyrifera_M_contig79607.18689.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp MWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHback to top mRNA from alignment at M-pyrifera_M_contig79607:61..894+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79607.18689.1 ID=mRNA_M-pyrifera_M_contig79607.18689.1|Name=mRNA_M-pyrifera_M_contig79607.18689.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig79607:61..894+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79607:61..894+ >mRNA_M-pyrifera_M_contig79607.18689.1 ID=mRNA_M-pyrifera_M_contig79607.18689.1|Name=mRNA_M-pyrifera_M_contig79607.18689.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig79607:61..894+ (Macrocystis pyrifera P11B4 male)back to top |