mRNA_M-pyrifera_M_contig79607.18689.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79607.18689.1
Unique NamemRNA_M-pyrifera_M_contig79607.18689.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A0M0JU91_9EUKA (Brf1 subunit of RNA polymerase iii transcription initiation factor iiib n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU91_9EUKA)

HSP 1 Score: 191 bits (485), Expect = 7.360e-55
Identity = 93/195 (47.69%), Postives = 135/195 (69.23%), Query Frame = 1
Query:   10 FESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594
            F +G+  +S  A++LR+  H  EAA R++++A+  N +QGRRT  V+ A LY  CR+E  P LL+++++V+  N++ LG+ +L+ +R L L +P +DP+LY+H+FASRL  G     V+ +A RLV RM++DWI  GRRP  ICGAALL+AARVHGF +T+ ++V  V   D+TLR RL EF  TP   L+A QL
Sbjct:   79 FNNGQRHISQLAAALRLAEHHQEAAQRLFMLAVQHNFIQGRRTQHVIAACLYTVCRKEKTPHLLIDYSDVLQENVYLLGSCFLKFTRLLSLTLPIIDPSLYIHRFASRLEFGDKTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLTEFAETPMGALTARQL 273          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A8J6BZU8_DIALT (B-related factor 1 n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6BZU8_DIALT)

HSP 1 Score: 197 bits (502), Expect = 2.400e-54
Identity = 100/192 (52.08%), Postives = 137/192 (71.35%), Query Frame = 1
Query:   19 GRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594
            GR  +S  A +L + SH VEAA R +L+A+  N +QGRRT  VV A LYI CRRE  P +L++F++V+  N+F+LG+T+L+ +R L L++P +DP+LY+H+FASRL LG  +  V+  A RLV RM++DWI  GRRP  ICGAALLVA+RVHGF +T+ ++V  V   D+TLR RL EFE T    L+A +L
Sbjct:   79 GRRKISHIAGALSLNSHHVEAAQRFFLLAVQHNFIQGRRTQHVVAACLYIVCRREKTPHMLIDFSDVLQTNVFALGSTFLKFTRLLNLQLPLIDPSLYIHRFASRLELGDKMHTVSILALRLVQRMKRDWIQTGRRPSGICGAALLVASRVHGFRRTQRELVHIVRICDVTLRKRLCEFEETACGALTAQEL 270          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A5A8DA24_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DA24_CAFRO)

HSP 1 Score: 196 bits (497), Expect = 4.120e-53
Identity = 97/194 (50.00%), Postives = 135/194 (69.59%), Query Frame = 1
Query:   13 ESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594
            ++G+  L      L++ SH V+ A R+Y+MALS+N  QGRR NVV  A LY  CRRE  P +L++FA+ + VN+F+LG T++R +R + ++MP +DP+LY+H+FA ++ LG    AV  TA RLV  M++DW+A GRRP  ICGA LLVAAR HGF + + D++  V   D T+RNRLAEFEA P A L+A Q+
Sbjct:   88 DNGKRHLHTLVGKLKLGSHHVDGALRLYIMALSKNFTQGRRANVVAAACLYTVCRRERTPHMLLDFADALRVNVFTLGHTFVRFARLVNIRMPMVDPSLYIHRFAGQMELGDKKHAVATTAMRLVQIMQRDWLAAGRRPAGICGACLLVAARAHGFRRRQEDVLRIVRVADCTVRNRLAEFEAAPVARLTAEQM 281          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: M1V3G8_CYAM1 (B-related factor 1 n=2 Tax=cellular organisms TaxID=131567 RepID=M1V3G8_CYAM1)

HSP 1 Score: 195 bits (495), Expect = 4.990e-53
Identity = 95/195 (48.72%), Postives = 136/195 (69.74%), Query Frame = 1
Query:   10 FESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594
            + +GR  ++  AS L +P   V+AA R++ +A+  N +QGRRT  V  A LYI CRRE  P LL++F++ + +N++ LG TYL+L R L L +P +DP+ Y+H+FASRL+LG    AV QTA RL++RM++DWI  GRRP  +CGAALL+AAR+HGF +++ +I A V   D+T+R RL E E TP  TL+  +L
Sbjct:  332 YAAGRRRIATIASQLHLPPRFVDAAHRLFTLAVQHNFVQGRRTQTVAAAALYIVCRREKTPHLLIDFSDTLRINVYVLGHTYLKLCRVLHLALPIIDPSFYIHRFASRLDLGEKQNAVAQTALRLISRMKRDWIHTGRRPAGLCGAALLIAARMHGFRRSQREIGAVVRVGDMTIRQRLCEIEETPTGTLTGREL 526          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7J7IDI4_9RHOD (B-related factor 1 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDI4_9RHOD)

HSP 1 Score: 191 bits (484), Expect = 7.440e-52
Identity = 93/195 (47.69%), Postives = 134/195 (68.72%), Query Frame = 1
Query:   10 FESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594
            + +GR  ++  AS L +P   V+AA R++ +A+  N +QGRRT  V  A LYI CRRE  P LL++F++ + +N++ LG TYL+L R L L +P +DP+ Y+H+FASRL  G     V QTA RL++RM++DWI  GRRP  +CGAALL++AR+HGF +++ +I A V   D+T+R RL+E E TP ATL+   L
Sbjct:  194 YAAGRRRIATIASQLHLPPRFVDAAHRLFTLAVQHNFVQGRRTQNVAAAALYIVCRREKTPHLLIDFSDALRINVYVLGHTYLKLCRVLHLSLPIIDPSFYIHRFASRLEFGEKQNLVAQTALRLISRMKRDWIHTGRRPAGLCGAALLISARMHGFRRSQREISAVVRVGDMTIRQRLSEIEETPTATLTGRDL 388          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7S3ZRV4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRV4_9STRA)

HSP 1 Score: 187 bits (474), Expect = 9.790e-52
Identity = 92/188 (48.94%), Postives = 135/188 (71.81%), Query Frame = 1
Query:   19 GRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLS 582
            G+  +   A+SLR+  H V+ A R++ +A  RN  QGR+T  VV A LY+ CRRE    +LV+F++V+ VN++SLGAT+L+  R L L++P +DP+LY+H+FA++L LG A  AV  TA ++V RM++DWI  GRRP  +C AALLV+AR HGF +T+ D+V+A+    +T+  RLA+F+ATPAA L+
Sbjct:   96 GKRKIEQVANSLRLGQHYVDGADRIFKLAAQRNFTQGRKTLHVVCACLYVMCRREKSAHMLVDFSDVLQVNVYSLGATFLKFRRVLNLELPLVDPSLYIHRFAAKLELGDAASAVGATALKVVQRMKRDWIETGRRPAGVCAAALLVSARAHGFHRTQQDVVSALRVCGMTVSKRLADFQATPAAQLT 283          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7S4BVT8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BVT8_CHRCT)

HSP 1 Score: 182 bits (462), Expect = 3.320e-51
Identity = 90/195 (46.15%), Postives = 133/195 (68.21%), Query Frame = 1
Query:   10 FESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594
            F +G+  +S  A++LR+  H  EAA+R++ +A+  N +QGR+T  V+ A LY  CRRE    LL+++++V+  N++ LG+ +L+ +R L L +P +DP+LY+H+FAS+L  G     V+ +A RLV RM++DWI  GRRP  ICGAALL+AARVHGF +T+ ++V  V   D+TLR RL EF  T    L+A QL
Sbjct:   77 FANGQRHISQLAAALRLADHHQEAANRLFHLAVQHNFIQGRKTQHVIAACLYTVCRREKTAHLLIDYSDVLQTNVYLLGSCFLKFTRILSLTLPIIDPSLYIHRFASKLEFGDRTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLDEFSDTAVGVLTAQQL 271          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7S2RQN0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQN0_9STRA)

HSP 1 Score: 185 bits (470), Expect = 9.020e-51
Identity = 88/192 (45.83%), Postives = 135/192 (70.31%), Query Frame = 1
Query:   19 GRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594
            G++ ++  A  LR+ +H +++A R++  A+ RN +QGR+T  VV   LYI CR +  P +L++F++ + VN+F+LG+ +L+  R L +  P +DP+LY+H+FA+R++LG    AV Q+A R+V RM++DWI  GRRP  IC AALL+AAR HGF +T+A++V  +    +T+R RL EFEATPAA L+  QL
Sbjct:   82 GKASIAEVAGRLRLQNHYIDSAHRLFTFAVQRNFVQGRKTMHVVAVCLYIKCREDKSPHMLIDFSDALSVNVFTLGSCFLKFCRLLSIDTPLIDPSLYIHRFAARMDLGAKTQAVAQSALRIVARMKRDWIQTGRRPAGICAAALLIAARTHGFPRTQAEVVKILRVCGMTVRTRLEEFEATPAAQLTMDQL 273          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: F0YC94_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC94_AURAN)

HSP 1 Score: 187 bits (476), Expect = 2.320e-50
Identity = 94/191 (49.21%), Postives = 135/191 (70.68%), Query Frame = 1
Query:   19 GRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQ 591
            GR  ++  ASSLR+ +H V+ A R++ MA  RN  QGR+T  VV A LY+ CRRE    +L++F++V+ VN+++LGAT+L+  R L L++P +DP+LY+H+FA++L LG    AV  TA R+V RM++DWI  GRRP  +C AALLV AR HGF +T+ D+V A+    +T+  RLA+F+ATPAA LS  +
Sbjct:  487 GRRKIAQVASSLRLGAHFVDGAHRLFGMAAQRNFTQGRKTLHVVCACLYVMCRREKSAHMLIDFSDVLQVNVYALGATFLKFRRLLNLELPIIDPSLYIHRFAAKLELGDKCGAVATTALRVVQRMKRDWIETGRRPAGVCAAALLVGARAHGFHRTQDDVVKALRVCGMTVAKRLADFQATPAAQLSLAE 677          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7S0IX97_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IX97_9EUKA)

HSP 1 Score: 181 bits (458), Expect = 3.010e-50
Identity = 89/195 (45.64%), Postives = 133/195 (68.21%), Query Frame = 1
Query:   10 FESGRSLLSMWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*KTRADIVAAVATTDITLRNRLAEFEATPAATLSATQL 594
            + +G+  +S  A++LR+  H  EAA R++ +A+  N +QGR+T  V+ A LY  CRRE    LL+++++V+  N++ LG+ +L+ +R L L +P +DP+LY+H+FAS+L  G     V+ +A RLV RM++DWI  GRRP  ICGAALL+AARVHGF +T+ ++V  V   D+TLR RL EF  T   +L+A QL
Sbjct:   76 YTNGQRHISQLAAALRLADHHQEAAQRLFNLAVQHNFIQGRKTQHVIAACLYTVCRREKTAHLLIDYSDVLQTNVYMLGSCFLKFTRLLSLTLPIIDPSLYIHRFASKLEFGDKTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLNEFGETALGSLTAQQL 270          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0M0JU91_9EUKA7.360e-5547.69Brf1 subunit of RNA polymerase iii transcription i... [more]
A0A8J6BZU8_DIALT2.400e-5452.08B-related factor 1 n=2 Tax=Diacronema lutheri TaxI... [more]
A0A5A8DA24_CAFRO4.120e-5350.00Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
M1V3G8_CYAM14.990e-5348.72B-related factor 1 n=2 Tax=cellular organisms TaxI... [more]
A0A7J7IDI4_9RHOD7.440e-5247.69B-related factor 1 n=1 Tax=Cyanidiococcus yangming... [more]
A0A7S3ZRV4_9STRA9.790e-5248.94Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4BVT8_CHRCT3.320e-5146.15Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7S2RQN0_9STRA9.020e-5145.83Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YC94_AURAN2.320e-5049.21Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S0IX97_9EUKA3.010e-5045.64Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79607contigM-pyrifera_M_contig79607:61..894 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score168.7
Seed ortholog evalue2.1e-39
Seed eggNOG ortholog45157.CMA019CT
Preferred nameBRF1
KEGG koko:K15196
Hectar predicted targeting categorymitochondrion
GOsGO:0000126,GO:0000976,GO:0000992,GO:0000994,GO:0000995,GO:0001006,GO:0001016,GO:0001025,GO:0001032,GO:0001067,GO:0001112,GO:0001120,GO:0001156,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0006139,GO:0006259,GO:0006351,GO:0006352,GO:0006355,GO:0006359,GO:0006383,GO:0006384,GO:0006399,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009303,GO:0009304,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015074,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031974,GO:0031981,GO:0032091,GO:0032196,GO:0032774,GO:0032991,GO:0034367,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043487,GO:0043488,GO:0043496,GO:0043565,GO:0043933,GO:0044085,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044798,GO:0045893,GO:0045935,GO:0045945,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051098,GO:0051100,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0061013,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070063,GO:0070893,GO:0070897,GO:0070898,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090074,GO:0090304,GO:0090576,GO:0097159,GO:0097659,GO:0098781,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903311,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141
EggNOG free text desc.DNA-templated transcriptional preinitiation complex assembly
EggNOG OGsCOG1405@1,KOG1598@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021
Exons1
Model size834
Cds size447
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79607.18689.1prot_M-pyrifera_M_contig79607.18689.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79607 97..543 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816699.9461122-UTR-M-pyrifera_M_contig79607:60..961622816699.9461122-UTR-M-pyrifera_M_contig79607:60..96Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79607 61..96 +
1692278127.2856605-UTR-M-pyrifera_M_contig79607:60..961692278127.2856605-UTR-M-pyrifera_M_contig79607:60..96Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79607 61..96 +
1622816699.9705565-UTR-M-pyrifera_M_contig79607:543..8941622816699.9705565-UTR-M-pyrifera_M_contig79607:543..894Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79607 544..894 +
1692278127.3084931-UTR-M-pyrifera_M_contig79607:543..8941692278127.3084931-UTR-M-pyrifera_M_contig79607:543..894Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79607 544..894 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816699.9598973-CDS-M-pyrifera_M_contig79607:96..5431622816699.9598973-CDS-M-pyrifera_M_contig79607:96..543Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79607 97..543 +
1692278127.298831-CDS-M-pyrifera_M_contig79607:96..5431692278127.298831-CDS-M-pyrifera_M_contig79607:96..543Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79607 97..543 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79607.18689.1

>prot_M-pyrifera_M_contig79607.18689.1 ID=prot_M-pyrifera_M_contig79607.18689.1|Name=mRNA_M-pyrifera_M_contig79607.18689.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
MWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREH
FPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRL
NLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*
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mRNA from alignment at M-pyrifera_M_contig79607:61..894+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79607.18689.1 ID=mRNA_M-pyrifera_M_contig79607.18689.1|Name=mRNA_M-pyrifera_M_contig79607.18689.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig79607:61..894+ (Macrocystis pyrifera P11B4 male)
CAGCGTTCTTTCGAGAGCGGTCGTTCTTTGCTGAGCATGTGGGCGTCTTC CCTTCGCGTGCCTTCGCACTTGGTGGAGGCTGCTAGTCGCGTGTACTTGA TGGCTCTGAGCCGGAACTTGTTGCAGGGTCGGCGCACGAACGTGGTGGTG GGAGCTACGCTGTACATTGCGTGTCGACGCGAGCATTTTCCTGCGCTTTT GGTGGAGTTTGCCAACGTGATGGGGGTGAACATGTTCTCTCTGGGTGCCA CATACCTCCGTCTCAGCCGAGCTCTGGGGCTGAAAATGCCTCCTCTCGAC CCCACCCTCTACCTCCACAAATTCGCCAGTCGCCTCAACCTCGGCCCGGC CATCCCCGCTGTCACCCAAACTGCCACCAGACTCGTGACCAGAATGCGAA AGGACTGGATCGCAGAGGGAAGGAGGCCGCAAGCCATCTGTGGAGCTGCG CTTCTCGTAGCTGCCAGAGTACACGGCTTCTAGAAAACCAGAGCCGACAT CGTGGCTGCTGTAGCCACCACGGACATCACGCTGCGAAACAGACTTGCTG AATTTGAAGCCACTCCAGCTGCGACGCTCTCGGCAACACAACTCCCTCTC TCCACTGACCAAAACCCATCATCCACCATCCAAGCACTCCCCTCCACCTC CACCACAGCCACCACCAACCCATCCACCACCACCACCAACCCATCCACCT CCACAACCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCT TCTTCTTCTGCCGCTGCTGGGACTGGAGGAGAGGAAGCAGGGGAAGGGAG GAGAGCACAGGACTTGGAAGTGGTGGAGGCTGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79607:61..894+

>mRNA_M-pyrifera_M_contig79607.18689.1 ID=mRNA_M-pyrifera_M_contig79607.18689.1|Name=mRNA_M-pyrifera_M_contig79607.18689.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig79607:61..894+ (Macrocystis pyrifera P11B4 male)
ATGTGGGCGTCTTCCCTTCGCGTGCCTTCGCACTTGGTGGAGGCTGCTAG
TCGCGTGTACTTGATGGCTCTGAGCCGGAACTTGTTGCAGGGTCGGCGCA
CGAACGTGGTGGTGGGAGCTACGCTGTACATTGCGTGTCGACGCGAGCAT
TTTCCTGCGCTTTTGGTGGAGTTTGCCAACGTGATGGGGGTGAACATGTT
CTCTCTGGGTGCCACATACCTCCGTCTCAGCCGAGCTCTGGGGCTGAAAA
TGCCTCCTCTCGACCCCACCCTCTACCTCCACAAATTCGCCAGTCGCCTC
AACCTCGGCCCGGCCATCCCCGCTGTCACCCAAACTGCCACCAGACTCGT
GACCAGAATGCGAAAGGACTGGATCGCAGAGGGAAGGAGGCCGCAAGCCA
TCTGTGGAGCTGCGCTTCTCGTAGCTGCCAGAGTACACGGCTTCTAGATG
TGGGCGTCTTCCCTTCGCGTGCCTTCGCACTTGGTGGAGGCTGCTAGTCG
CGTGTACTTGATGGCTCTGAGCCGGAACTTGTTGCAGGGTCGGCGCACGA
ACGTGGTGGTGGGAGCTACGCTGTACATTGCGTGTCGACGCGAGCATTTT
CCTGCGCTTTTGGTGGAGTTTGCCAACGTGATGGGGGTGAACATGTTCTC
TCTGGGTGCCACATACCTCCGTCTCAGCCGAGCTCTGGGGCTGAAAATGC
CTCCTCTCGACCCCACCCTCTACCTCCACAAATTCGCCAGTCGCCTCAAC
CTCGGCCCGGCCATCCCCGCTGTCACCCAAACTGCCACCAGACTCGTGAC
CAGAATGCGAAAGGACTGGATCGCAGAGGGAAGGAGGCCGCAAGCCATCT
GTGGAGCTGCGCTTCTCGTAGCTGCCAGAGTACACGGCTTCTAG
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