prot_M-pyrifera_M_contig79607.18689.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79607.18689.1
Unique Nameprot_M-pyrifera_M_contig79607.18689.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length149
Homology
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A8J6BZU8_DIALT (B-related factor 1 n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6BZU8_DIALT)

HSP 1 Score: 171 bits (434), Expect = 7.090e-47
Identity = 81/146 (55.48%), Postives = 110/146 (75.34%), Query Frame = 0
Query:    3 ASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF 148
            A +L + SH VEAA R +L+A+  N +QGRRT  VV A LYI CRRE  P +L++F++V+  N+F+LG+T+L+ +R L L++P +DP+LY+H+FASRL LG  +  V+  A RLV RM++DWI  GRRP  ICGAALLVA+RVHGF
Sbjct:   87 AGALSLNSHHVEAAQRFFLLAVQHNFIQGRRTQHVVAACLYIVCRREKTPHMLIDFSDVLQTNVFALGSTFLKFTRLLNLQLPLIDPSLYIHRFASRLELGDKMHTVSILALRLVQRMKRDWIQTGRRPSGICGAALLVASRVHGF 232          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: M1V3G8_CYAM1 (B-related factor 1 n=2 Tax=cellular organisms TaxID=131567 RepID=M1V3G8_CYAM1)

HSP 1 Score: 170 bits (430), Expect = 3.590e-46
Identity = 78/146 (53.42%), Postives = 107/146 (73.29%), Query Frame = 0
Query:    3 ASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF 148
            AS L +P   V+AA R++ +A+  N +QGRRT  V  A LYI CRRE  P LL++F++ + +N++ LG TYL+L R L L +P +DP+ Y+H+FASRL+LG    AV QTA RL++RM++DWI  GRRP  +CGAALL+AAR+HGF
Sbjct:  343 ASQLHLPPRFVDAAHRLFTLAVQHNFVQGRRTQTVAAAALYIVCRREKTPHLLIDFSDTLRINVYVLGHTYLKLCRVLHLALPIIDPSFYIHRFASRLDLGEKQNAVAQTALRLISRMKRDWIHTGRRPAGLCGAALLIAARMHGF 488          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A0M0JU91_9EUKA (Brf1 subunit of RNA polymerase iii transcription initiation factor iiib n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU91_9EUKA)

HSP 1 Score: 160 bits (406), Expect = 4.240e-45
Identity = 73/146 (50.00%), Postives = 106/146 (72.60%), Query Frame = 0
Query:    3 ASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF 148
            A++LR+  H  EAA R++++A+  N +QGRRT  V+ A LY  CR+E  P LL+++++V+  N++ LG+ +L+ +R L L +P +DP+LY+H+FASRL  G     V+ +A RLV RM++DWI  GRRP  ICGAALL+AARVHGF
Sbjct:   90 AAALRLAEHHQEAAQRLFMLAVQHNFIQGRRTQHVIAACLYTVCRKEKTPHLLIDYSDVLQENVYLLGSCFLKFTRLLSLTLPIIDPSLYIHRFASRLEFGDKTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGF 235          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7S0LNL5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LNL5_9EUKA)

HSP 1 Score: 155 bits (391), Expect = 8.060e-45
Identity = 70/146 (47.95%), Postives = 104/146 (71.23%), Query Frame = 0
Query:    3 ASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF 148
            A++LR+  H  EAA R++++A+  N +QGR+T  V+ A LY  CRRE    LL+++++V+  N++ LG+ +L+ +R L L +P +DP+LY+H+FAS+L  G     V+ +A RLV RM++DWI  GRRP  ICGAALL+AAR HGF
Sbjct:   69 AAALRLAEHHQEAAQRLFMLAVQHNFIQGRKTQHVIAACLYTVCRREKTAHLLIDYSDVLQTNVYMLGSCFLKFTRMLSLTLPIIDPSLYIHRFASKLEFGDKTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARGHGF 214          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A5A8DA24_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DA24_CAFRO)

HSP 1 Score: 166 bits (419), Expect = 1.210e-44
Identity = 77/143 (53.85%), Postives = 105/143 (73.43%), Query Frame = 0
Query:    6 LRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF 148
            L++ SH V+ A R+Y+MALS+N  QGRR NVV  A LY  CRRE  P +L++FA+ + VN+F+LG T++R +R + ++MP +DP+LY+H+FA ++ LG    AV  TA RLV  M++DW+A GRRP  ICGA LLVAAR HGF
Sbjct:  101 LKLGSHHVDGALRLYIMALSKNFTQGRRANVVAAACLYTVCRRERTPHMLLDFADALRVNVFTLGHTFVRFARLVNIRMPMVDPSLYIHRFAGQMELGDKKHAVATTAMRLVQIMQRDWLAAGRRPAGICGACLLVAARAHGF 243          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7S3ZRV4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRV4_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.710e-44
Identity = 76/146 (52.05%), Postives = 107/146 (73.29%), Query Frame = 0
Query:    3 ASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF 148
            A+SLR+  H V+ A R++ +A  RN  QGR+T  VV A LY+ CRRE    +LV+F++V+ VN++SLGAT+L+  R L L++P +DP+LY+H+FA++L LG A  AV  TA ++V RM++DWI  GRRP  +C AALLV+AR HGF
Sbjct:  104 ANSLRLGQHYVDGADRIFKLAAQRNFTQGRKTLHVVCACLYVMCRREKSAHMLVDFSDVLQVNVYSLGATFLKFRRVLNLELPLVDPSLYIHRFAAKLELGDAASAVGATALKVVQRMKRDWIETGRRPAGVCAAALLVSARAHGF 249          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7J7IDI4_9RHOD (B-related factor 1 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDI4_9RHOD)

HSP 1 Score: 164 bits (415), Expect = 2.880e-44
Identity = 75/146 (51.37%), Postives = 104/146 (71.23%), Query Frame = 0
Query:    3 ASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF 148
            AS L +P   V+AA R++ +A+  N +QGRRT  V  A LYI CRRE  P LL++F++ + +N++ LG TYL+L R L L +P +DP+ Y+H+FASRL  G     V QTA RL++RM++DWI  GRRP  +CGAALL++AR+HGF
Sbjct:  205 ASQLHLPPRFVDAAHRLFTLAVQHNFVQGRRTQNVAAAALYIVCRREKTPHLLIDFSDALRINVYVLGHTYLKLCRVLHLSLPIIDPSFYIHRFASRLEFGEKQNLVAQTALRLISRMKRDWIHTGRRPAGLCGAALLISARMHGF 350          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A7S4BVT8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BVT8_CHRCT)

HSP 1 Score: 155 bits (393), Expect = 5.770e-43
Identity = 71/146 (48.63%), Postives = 105/146 (71.92%), Query Frame = 0
Query:    3 ASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF 148
            A++LR+  H  EAA+R++ +A+  N +QGR+T  V+ A LY  CRRE    LL+++++V+  N++ LG+ +L+ +R L L +P +DP+LY+H+FAS+L  G     V+ +A RLV RM++DWI  GRRP  ICGAALL+AARVHGF
Sbjct:   88 AAALRLADHHQEAANRLFHLAVQHNFIQGRKTQHVIAACLYTVCRREKTAHLLIDYSDVLQTNVYLLGSCFLKFTRILSLTLPIIDPSLYIHRFASKLEFGDRTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGF 233          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: F0YC94_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC94_AURAN)

HSP 1 Score: 160 bits (406), Expect = 6.630e-43
Identity = 76/146 (52.05%), Postives = 106/146 (72.60%), Query Frame = 0
Query:    3 ASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF 148
            ASSLR+ +H V+ A R++ MA  RN  QGR+T  VV A LY+ CRRE    +L++F++V+ VN+++LGAT+L+  R L L++P +DP+LY+H+FA++L LG    AV  TA R+V RM++DWI  GRRP  +C AALLV AR HGF
Sbjct:  495 ASSLRLGAHFVDGAHRLFGMAAQRNFTQGRKTLHVVCACLYVMCRREKSAHMLIDFSDVLQVNVYALGATFLKFRRLLNLELPIIDPSLYIHRFAAKLELGDKCGAVATTALRVVQRMKRDWIETGRRPAGVCAAALLVGARAHGF 640          
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Match: A0A1Z5JG53_FISSO (B-related factor 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JG53_FISSO)

HSP 1 Score: 158 bits (400), Expect = 9.500e-43
Identity = 75/146 (51.37%), Postives = 107/146 (73.29%), Query Frame = 0
Query:    3 ASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREHFPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRLNLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF 148
            AS LR+ SH V+AA R++ +A+ +N +QGRRT  VV A LYIACR+E    +L++F++ + VN+++LG  +L+  R LGL++  +DP LY+++FA+ L+L     AV+ TA RLV RM++DWI  GRRP  IC AALL+AARVHGF
Sbjct:  127 ASRLRLGSHFVDAAHRLFTIAVEKNFVQGRRTIHVVAACLYIACRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLQLEIIDPALYIYRFAAHLDLDEKANAVSMTALRLVARMKRDWIVAGRRPAGICAAALLIAARVHGF 272          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79607.18689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J6BZU8_DIALT7.090e-4755.48B-related factor 1 n=2 Tax=Diacronema lutheri TaxI... [more]
M1V3G8_CYAM13.590e-4653.42B-related factor 1 n=2 Tax=cellular organisms TaxI... [more]
A0A0M0JU91_9EUKA4.240e-4550.00Brf1 subunit of RNA polymerase iii transcription i... [more]
A0A7S0LNL5_9EUKA8.060e-4547.95Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A5A8DA24_CAFRO1.210e-4453.85Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A7S3ZRV4_9STRA2.710e-4452.05Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7J7IDI4_9RHOD2.880e-4451.37B-related factor 1 n=1 Tax=Cyanidiococcus yangming... [more]
A0A7S4BVT8_CHRCT5.770e-4348.63Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
F0YC94_AURAN6.630e-4352.05Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A1Z5JG53_FISSO9.500e-4351.37B-related factor 1 n=2 Tax=Fistulifera solaris Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000812Transcription factor TFIIBPRINTSPR00685TIFACTORIIBcoord: 39..58
score: 43.0
coord: 129..145
score: 27.45
coord: 65..80
score: 23.75
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 4..148
NoneNo IPR availableGENE3D1.10.472.10coord: 1..87
e-value: 3.7E-23
score: 83.4
NoneNo IPR availableGENE3D1.10.472.10coord: 88..148
e-value: 1.4E-15
score: 59.3
IPR013150Transcription factor TFIIB, cyclin-like domainPFAMPF00382TFIIBcoord: 3..65
e-value: 1.6E-11
score: 44.1
coord: 94..146
e-value: 3.1E-10
score: 40.0
IPR029529Transcription factor IIIB subunit Brf1PANTHERPTHR11618:SF4TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNITcoord: 4..148
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 3..86
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 88..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79607contigM-pyrifera_M_contig79607:97..543 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79607.18689.1mRNA_M-pyrifera_M_contig79607.18689.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79607 61..894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79607.18689.1 ID=prot_M-pyrifera_M_contig79607.18689.1|Name=mRNA_M-pyrifera_M_contig79607.18689.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
MWASSLRVPSHLVEAASRVYLMALSRNLLQGRRTNVVVGATLYIACRREH
FPALLVEFANVMGVNMFSLGATYLRLSRALGLKMPPLDPTLYLHKFASRL
NLGPAIPAVTQTATRLVTRMRKDWIAEGRRPQAICGAALLVAARVHGF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000812TFIIB
IPR013150TFIIB_cyclin
IPR029529Brf1
IPR036915Cyclin-like_sf