mRNA_M-pyrifera_M_contig79284.18616.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79284.18616.1
Unique NamemRNA_M-pyrifera_M_contig79284.18616.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A023GN49_AMBTT (Selenoprotein O (Fragment) n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023GN49_AMBTT)

HSP 1 Score: 259 bits (663), Expect = 3.470e-82
Identity = 138/243 (56.79%), Postives = 162/243 (66.67%), Query Frame = 1
Query:    4 EGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732
            E L+F    LK LPID EE N+VR+ V  A++SRV P+ LE P ++  SED   LL L       ++    FSG K+  G    AHCYCG+QFG FAGQLGDGA M LGEV    G   E+QLKGAG TPYSRSADGRKVLRSS+REFL SE MH LGIP+TRA   V S STV RDMFYDG    E+C+V+ R+  TFLRFGSFEIF++ D  TG  GPS G +E+L  L  YT   FFP +
Sbjct:   33 ETLKFDNLALKTLPIDKEERNYVRT-VNGAVFSRVSPTPLESPELVVFSEDAMMLLDLPPSELERQDAAEYFSGNKLLPGSETAAHCYCGHQFGYFAGQLGDGAAMYLGEVINRKGERWEIQLKGAGLTPYSRSADGRKVLRSSLREFLCSEAMHYLGIPTTRAGTCVTSSSTVSRDMFYDGHPKDEKCSVILRIAPTFLRFGSFEIFKTLDSFTGRVGPSVGRKEILLQLLNYTVESFFPEI 274          
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A7R9MP19_9ACAR (Selenoprotein O (Fragment) n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9MP19_9ACAR)

HSP 1 Score: 257 bits (656), Expect = 1.380e-81
Identity = 132/244 (54.10%), Postives = 166/244 (68.03%), Query Frame = 1
Query:    1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732
            +E LEF    L+ LP+D  E N+VRS V NA +SRV P+ L  PR+++ S+    L+ +      SE+FV   +G K+ +G  P +HCYCG+QFG+FAGQLGDGAV+ LGEV    G   E+QLKGAGRTPYSR ADGRKVLRSS+REFL SE MH LG  +TRA   V SD  V+RDMFY G    E C+V++R+  TFLRFGSFEIF++ DP TG  GPS G  ++L +L  YT   FFP +
Sbjct:    7 LETLEFDNKALRRLPLDAIEDNYVRS-VSNACFSRVRPTPLSNPRLVSYSKSALKLIDISEEEVVSEDFVQYMTGNKLMSGSEPASHCYCGHQFGTFAGQLGDGAVIYLGEVVTSCGDRWEIQLKGAGRTPYSREADGRKVLRSSVREFLCSEAMHGLGGATTRAATCVISDDKVVRDMFYKGEPTLEYCSVISRLAPTFLRFGSFEIFKTVDPMTGRRGPSVGRNDILLSLIEYTIETFFPEI 249          
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A5A8BZY5_CAFRO (Selenoprotein O n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BZY5_CAFRO)

HSP 1 Score: 270 bits (690), Expect = 1.280e-79
Identity = 139/245 (56.73%), Postives = 178/245 (72.65%), Query Frame = 1
Query:    7 GLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASE--EFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHVI 735
             L F    L++LP+D + +N VR PV +A +SRV P+ ++KPR++A SE   ALLGL    EA+E  +     SG K+P G  P+A+CYCGYQFG F+GQLGDGA M LGEV    G   E+QLKGAG+TPYSR+ADGRKVLRSS+REFL SE MH+LG+P+TRA  VV SDST++RD+FY GR   E+C+V+TR+  TFLRFGSFEIF++ DP TG AGPS GN +LL  +  YT + FF  ++
Sbjct:  673 SLRFDNRALRVLPVDADATNSVRDPVADACFSRVKPTPVDKPRMVAASESALALLGLPLS-EAAERADGAEYLSGNKLPDGADPVANCYCGYQFGYFSGQLGDGAAMTLGEVVNDAGERYELQLKGAGKTPYSRTADGRKVLRSSLREFLCSEAMHSLGVPTTRAGSVVTSDSTIVRDVFYTGRPEAEQCSVITRMAPTFLRFGSFEIFKAKDPTTGRAGPSPGNLDLLNRMVDYTCNAFFKDIV 916          
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A6J8AYH4_MYTCO (Selenoprotein O n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AYH4_MYTCO)

HSP 1 Score: 260 bits (664), Expect = 1.920e-79
Identity = 132/244 (54.10%), Postives = 169/244 (69.26%), Query Frame = 1
Query:    1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732
            +E L F    L+ LPIDP   N+VRS V  A +S+V P+ ++KP ++AVS+    LLG+       ++FV  FSG K+  G  P AHCYCG+QFG F+GQLGDGA M LGEV   +G   E+Q KGAG+TPYSR+ADGRKVLRS+IREFL SE +H LGIP+TRA   V S+STV+RD+FY G  + E+C VV R+  TFLRFGSFEIF++ DP TG AGPS G  ++L  +  YT   F+P +
Sbjct:    4 LETLNFDNSALRSLPIDPVTDNYVRS-VAGACFSKVKPTPVDKPSLVAVSQPALDLLGIPPPETNRDDFVQFFSGNKLLPGSDPAAHCYCGHQFGYFSGQLGDGATMYLGEVINKNGERWEIQFKGAGKTPYSRTADGRKVLRSTIREFLCSEAIHHLGIPTTRAGTCVTSESTVVRDIFYSGDPIEEKCTVVLRIAPTFLRFGSFEIFKTLDPQTGRAGPSVGRNDILIQMLEYTVQTFYPEI 246          
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A836CN66_9STRA (Selenoprotein O n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN66_9STRA)

HSP 1 Score: 258 bits (658), Expect = 8.410e-79
Identity = 132/242 (54.55%), Postives = 163/242 (67.36%), Query Frame = 1
Query:    1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFP 726
            ++ L F    +K LP+DPEE NFVR  V NA +S+V P+ +  P+++A+S+D   LLGL        +     SG K+  G +P AHCYCG+QFGSF+GQLGDGA M LGEV    G   E+Q KGAG TPYSR  DGRKVLRSSIREFL SE MH LGIP+TRA  +V SD+ V RD+FY G  + ER  +V R+  TFLRFGSFEIF+  DP TG  GPS GN +LL+ +  Y+ S FFP
Sbjct:    5 LDSLPFDNVAVKALPVDPEERNFVRPAVPNACFSKVAPAPVRDPKIVAISQDAMDLLGLSSCEVNRPDAAEYLSGNKLFPGASPHAHCYCGHQFGSFSGQLGDGAAMYLGEVVNERGERWEMQFKGAGPTPYSRRGDGRKVLRSSIREFLCSEAMHYLGIPTTRAASMVTSDTLVQRDLFYTGDVINERATIVLRIAPTFLRFGSFEIFKGTDPTTGRRGPSEGNVDLLKKMLHYSLSTFFP 246          
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A443RR32_9ACAR (Selenoprotein O n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A443RR32_9ACAR)

HSP 1 Score: 257 bits (657), Expect = 2.920e-78
Identity = 130/245 (53.06%), Postives = 166/245 (67.76%), Query Frame = 1
Query:    1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHVI 735
            +E L F     K LPID EE N+VR+ V NA +S+V P+ L+ P+++  S D   L+ +       ++FV  F G K+  G  PLAHCYCG+QFG FAGQLGDGA + LGE+   D    E+QLKGAG TPYSRSADGRKVLRSSIRE+L SE MH LGIP+TRA   + SD TV RD+FYDG    E+C V++R+ +TF+RFGSFEIF+  DP TG  GPS G  ++ +TL  Y    F+PH++
Sbjct:   26 LETLNFDNKVYKCLPIDTEERNYVRT-VSNACFSKVKPTPLKNPKMVCYSLDALKLVDINENEVKRDDFVEYFVGNKLLPGSEPLAHCYCGHQFGVFAGQLGDGAAIYLGEIINEDNQRWELQLKGAGLTPYSRSADGRKVLRSSIREYLCSEAMHYLGIPTTRAGTCITSDETVERDIFYDGHPKNEKCTVISRIAQTFIRFGSFEIFKVMDPMTGRRGPSVGRYDIFKTLLDYVVETFYPHIV 269          
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: UPI000C6D134E (selenoprotein O-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D134E)

HSP 1 Score: 256 bits (655), Expect = 3.320e-78
Identity = 134/244 (54.92%), Postives = 164/244 (67.21%), Query Frame = 1
Query:    1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732
            ++ L F    ++ LPIDP E N+VR+ VRNA +SRV P+ +E P  +A S     LL L       ++F   FSG K+  G  P AHCYCG+QFG F+GQLGDGA M LGEV    G   E+QLKGAG+TPYSR ADGRKVLRSSIREFL SE MH LGIP+TRA   V SD+ V+RD+FYDG  V ERC +V+R+  TFLRFGSFEIF++ D  TG  GPS G  ++L  +  YT   FFP +
Sbjct:    4 LDRLRFDNLAIRELPIDPVEENYVRN-VRNACFSRVEPTPVENPVTVAYSIGAFQLLDLPESELRRDDFSQYFSGNKLLKGSEPAAHCYCGHQFGYFSGQLGDGAAMYLGEVINSRGERWEIQLKGAGKTPYSRQADGRKVLRSSIREFLCSEAMHYLGIPTTRAGSCVTSDTKVIRDIFYDGHPVLERCTIVSRIAPTFLRFGSFEIFKTIDEFTGRVGPSVGRTDILMKMLEYTIKTFFPEI 246          
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A814ZV49_ADIRI (Selenoprotein O n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A814ZV49_ADIRI)

HSP 1 Score: 257 bits (657), Expect = 3.370e-78
Identity = 129/245 (52.65%), Postives = 174/245 (71.02%), Query Frame = 1
Query:    1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGL-QRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732
            +EG++F    L+ LPIDP E+N+VRS V  A +S+V P+ ++ P+++A S D   L+ + +  ++  ++   VFSG  +  GM P AHCYCG+QFG F+GQLGDGA M LGEV   +    E+Q KGAG+TPYSR+ADGRKVLRSSIREFL SE M+ LGIP+TRA   V SD  V+RD+FYDG A  ERC ++TR+ +TF+RFGSFEIF++ DP TG  GPS G  ++L+TL  Y  + F+P +
Sbjct:   33 MEGIKFDNLALRTLPIDPVEANYVRS-VSGACFSKVKPTPVKNPKLVAYSADALKLIDVGEDALKEEKQLAQVFSGNVLLPGMDPAAHCYCGHQFGYFSGQLGDGATMYLGEVINKNNERWELQFKGAGKTPYSRTADGRKVLRSSIREFLCSEAMYYLGIPTTRAGTCVTSDDYVIRDIFYDGNAKQERCTIITRIAQTFIRFGSFEIFKTLDPMTGRRGPSLGRNDILKTLLDYVVATFYPEI 276          
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: UPI001402BBC7 (protein adenylyltransferase SelO, mitochondrial n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001402BBC7)

HSP 1 Score: 257 bits (657), Expect = 3.810e-78
Identity = 137/247 (55.47%), Postives = 166/247 (67.21%), Query Frame = 1
Query:    1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQ--RGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHVI 735
            +E L F    L+ LP+DP +    R  V  A++SRV PS +E+PRV+A+S     LLGL+      A  E     SG +VP G  P AHCYCG+QFGSFAGQLGDGA M LGEVQ   G   EVQLKGAG TPYSR +DGRKVLRSS+REFL SE MH LG+P+TRA   V S STVLRD+ YDG A PE+C+VV R+  +FLRFGSFEIF+S D  TG  GPSAG  ++  T+  Y    F+P ++
Sbjct:   51 LETLRFDNSALRRLPLDPSDDPAPRQ-VPGAVFSRVRPSPVERPRVVAISVPALRLLGLRDPEAEAARPEAAEFLSGNRVPPGAQPAAHCYCGHQFGSFAGQLGDGAAMYLGEVQPGPGQRWEVQLKGAGPTPYSRHSDGRKVLRSSLREFLCSEAMHHLGVPTTRAGSCVTSHSTVLRDVHYDGNARPEQCSVVLRIAPSFLRFGSFEIFKSTDKDTGRTGPSAGREDIKVTMLDYVIDTFYPELL 296          
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A1E1XCD7_9ACAR (Selenoprotein O n=2 Tax=Amblyomma TaxID=6942 RepID=A0A1E1XCD7_9ACAR)

HSP 1 Score: 254 bits (650), Expect = 1.320e-77
Identity = 135/243 (55.56%), Postives = 162/243 (66.67%), Query Frame = 1
Query:    4 EGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732
            E L+F    L+ LPID EE N+VR+ V  A++SRV P+ LE P V+  SED   LL L       ++    FSG K+  G    AHCYCG+QFG FAGQLGDGA M LGEV    G   E+QLKGAG TPYSRSADGRKVLRSS+REFL SE MH LG+P+TRA   V S +TV RDMFYDG    E+C+V+ R+  TFLRFGSFEIF++ D  TG  GPS G +E+L  L  Y+   FFP +
Sbjct:    5 ETLKFDNVALRTLPIDKEERNYVRT-VSGAVFSRVSPTPLECPEVVVFSEDAMLLLDLPPSELERQDAAEYFSGNKLLPGSETAAHCYCGHQFGYFAGQLGDGAAMYLGEVINHKGERWEIQLKGAGLTPYSRSADGRKVLRSSLREFLCSEAMHYLGVPTTRAGTCVTSSTTVSRDMFYDGHPRDEKCSVILRIAPTFLRFGSFEIFKTLDNFTGRVGPSVGRKEILLQLLNYSVETFFPEI 246          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A023GN49_AMBTT3.470e-8256.79Selenoprotein O (Fragment) n=1 Tax=Amblyomma trist... [more]
A0A7R9MP19_9ACAR1.380e-8154.10Selenoprotein O (Fragment) n=1 Tax=Oppiella nova T... [more]
A0A5A8BZY5_CAFRO1.280e-7956.73Selenoprotein O n=3 Tax=Cafeteria roenbergensis Ta... [more]
A0A6J8AYH4_MYTCO1.920e-7954.10Selenoprotein O n=1 Tax=Mytilus coruscus TaxID=421... [more]
A0A836CN66_9STRA8.410e-7954.55Selenoprotein O n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A443RR32_9ACAR2.920e-7853.06Selenoprotein O n=1 Tax=Dinothrombium tinctorium T... [more]
UPI000C6D134E3.320e-7854.92selenoprotein O-like n=1 Tax=Centruroides sculptur... [more]
A0A814ZV49_ADIRI3.370e-7852.65Selenoprotein O n=3 Tax=Adineta ricciae TaxID=2492... [more]
UPI001402BBC73.810e-7855.47protein adenylyltransferase SelO, mitochondrial n=... [more]
A0A1E1XCD7_9ACAR1.320e-7755.56Selenoprotein O n=2 Tax=Amblyomma TaxID=6942 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79284contigM-pyrifera_M_contig79284:36..881 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score250.4
Seed ortholog evalue8.6e-64
Seed eggNOG ortholog2880.D8LIY8
Preferred nameSELENOO
KEGG koko:K20865
KEGG Pathwayko04621,map04621
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.Uncharacterized ACR, YdiU/UPF0061 family
EggNOG OGsCOG0397@1,KOG2542@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons2
Model size735
Cds size714
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79284.18616.1prot_M-pyrifera_M_contig79284.18616.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79284 36..860 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816696.047898-CDS-M-pyrifera_M_contig79284:35..6891622816696.047898-CDS-M-pyrifera_M_contig79284:35..689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79284 36..689 -
1692278124.9356315-CDS-M-pyrifera_M_contig79284:35..6891692278124.9356315-CDS-M-pyrifera_M_contig79284:35..689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79284 36..689 -
1622816696.0591931-CDS-M-pyrifera_M_contig79284:800..8601622816696.0591931-CDS-M-pyrifera_M_contig79284:800..860Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79284 801..860 -
1692278124.9516695-CDS-M-pyrifera_M_contig79284:800..8601692278124.9516695-CDS-M-pyrifera_M_contig79284:800..860Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79284 801..860 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816696.0732398-UTR-M-pyrifera_M_contig79284:860..8811622816696.0732398-UTR-M-pyrifera_M_contig79284:860..881Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79284 861..881 -
1692278124.9618878-UTR-M-pyrifera_M_contig79284:860..8811692278124.9618878-UTR-M-pyrifera_M_contig79284:860..881Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79284 861..881 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79284.18616.1

>prot_M-pyrifera_M_contig79284.18616.1 ID=prot_M-pyrifera_M_contig79284.18616.1|Name=mRNA_M-pyrifera_M_contig79284.18616.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp
MPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALL
GLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVM
LLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHA
LGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFE
IFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHVI
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mRNA from alignment at M-pyrifera_M_contig79284:36..881-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79284.18616.1 ID=mRNA_M-pyrifera_M_contig79284.18616.1|Name=mRNA_M-pyrifera_M_contig79284.18616.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig79284:36..881- (Macrocystis pyrifera P11B4 male)
GTGGAAGGGCTGGAGTTTGCCATGCCCCAGTTGAAGATGCTGCCCATTGA CCCCGAGGAAAGTAACTTTGTGCGCAGTCCCGTAAGAGAAGAGTGAAGGA GGGGAGATTGGGGTTCTGGTGGGGGTTTGGGGGGATTTGGGTGATGTGTT TGGAGGTGAGGTGGATGGGTGTGGGTTTGTTGTGGTGTGCAGGTTCGGAA TGCCATTTATTCTCGCGTGATGCCAAGTGCATTGGAGAAGCCGCGTGTTT TGGCAGTTTCTGAGGATGTGCGCGCATTGTTGGGGCTGCAACGGGGCGTG GAGGCGTCGGAGGAGTTTGTGAATGTGTTCAGTGGCGGCAAAGTGCCTGC TGGCATGACTCCTCTGGCGCATTGCTATTGCGGGTATCAGTTTGGGTCGT TTGCAGGGCAGTTGGGGGATGGTGCGGTGATGCTTCTGGGAGAAGTGCAG TGTGTGGACGGCGTGTGGCGCGAAGTGCAGCTGAAGGGGGCGGGAAGGAC TCCATATTCGCGAAGTGCAGATGGGAGGAAAGTGCTCCGTTCTTCGATTC GCGAATTTTTGGCCTCAGAACACATGCACGCCCTGGGCATCCCGTCCACA CGGGCCCTCTGTGTGGTGGGCTCCGACTCCACGGTGCTGCGGGATATGTT TTACGACGGGAGGGCCGTGCCAGAGCGATGCGCCGTCGTGACCCGCGTCG GAGAAACGTTTCTCCGGTTCGGCTCCTTCGAAATCTTCCGCAGCGCCGAC CCGCACACGGGAGAGGCCGGGCCCAGCGCAGGCAACCGAGAGCTCCTCCA AACCCTCTTCCGCTACACCACCTCTCGATTCTTCCCTCACGTCATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79284:36..881-

>mRNA_M-pyrifera_M_contig79284.18616.1 ID=mRNA_M-pyrifera_M_contig79284.18616.1|Name=mRNA_M-pyrifera_M_contig79284.18616.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig79284:36..881- (Macrocystis pyrifera P11B4 male)
ATGCCCCAGTTGAAGATGCTGCCCATTGACCCCGAGGAAAGTAACTTTGT
GCGCAGTCCCATGCCCCAGTTGAAGATGCTGCCCATTGACCCCGAGGAAA
GTAACTTTGTGCGCAGTCCCGTTCGGAATGCCATTTATTCTCGCGTGATG
CCAAGTGCATTGGAGAAGCCGCGTGTTTTGGCAGTTTCTGAGGATGTGCG
CGCATTGTTGGGGCTGCAACGGGGCGTGGAGGCGTCGGAGGAGTTTGTGA
ATGTGTTCAGTGGCGGCAAAGTGCCTGCTGGCATGACTCCTCTGGCGCAT
TGCTATTGCGGGTATCAGTTTGGGTCGTTTGCAGGGCAGTTGGGGGATGG
TGCGGTGATGCTTCTGGGAGAAGTGCAGTGTGTGGACGGCGTGTGGCGCG
AAGTGCAGCTGAAGGGGGCGGGAAGGACTCCATATTCGCGAAGTGCAGAT
GGGAGGAAAGTGCTCCGTTCTTCGATTCGCGAATTTTTGGCCTCAGAACA
CATGCACGCCCTGGGCATCCCGTCCACACGGGCCCTCTGTGTGGTGGGCT
CCGACTCCACGGTGCTGCGGGATATGTTTTACGACGGGAGGGCCGTGCCA
GAGCGATGCGCCGTCGTGACCCGCGTCGGAGAAACGTTTCTCCGGTTCGG
CTCCTTCGAAATCTTCCGCAGCGCCGACCCGCACACGGGAGAGGCCGGGC
CCAGCGCAGGCAACCGAGAGCTCCTCCAAACCCTCTTCCGCTACACCACC
TCTCGATTCTTCCCTCACGTCATCGTTCGGAATGCCATTTATTCTCGCGT
GATGCCAAGTGCATTGGAGAAGCCGCGTGTTTTGGCAGTTTCTGAGGATG
TGCGCGCATTGTTGGGGCTGCAACGGGGCGTGGAGGCGTCGGAGGAGTTT
GTGAATGTGTTCAGTGGCGGCAAAGTGCCTGCTGGCATGACTCCTCTGGC
GCATTGCTATTGCGGGTATCAGTTTGGGTCGTTTGCAGGGCAGTTGGGGG
ATGGTGCGGTGATGCTTCTGGGAGAAGTGCAGTGTGTGGACGGCGTGTGG
CGCGAAGTGCAGCTGAAGGGGGCGGGAAGGACTCCATATTCGCGAAGTGC
AGATGGGAGGAAAGTGCTCCGTTCTTCGATTCGCGAATTTTTGGCCTCAG
AACACATGCACGCCCTGGGCATCCCGTCCACACGGGCCCTCTGTGTGGTG
GGCTCCGACTCCACGGTGCTGCGGGATATGTTTTACGACGGGAGGGCCGT
GCCAGAGCGATGCGCCGTCGTGACCCGCGTCGGAGAAACGTTTCTCCGGT
TCGGCTCCTTCGAAATCTTCCGCAGCGCCGACCCGCACACGGGAGAGGCC
GGGCCCAGCGCAGGCAACCGAGAGCTCCTCCAAACCCTCTTCCGCTACAC
CACCTCTCGATTCTTCCCTCACGTCATC
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