mRNA_M-pyrifera_M_contig79284.18616.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A023GN49_AMBTT (Selenoprotein O (Fragment) n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023GN49_AMBTT) HSP 1 Score: 259 bits (663), Expect = 3.470e-82 Identity = 138/243 (56.79%), Postives = 162/243 (66.67%), Query Frame = 1 Query: 4 EGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732 E L+F LK LPID EE N+VR+ V A++SRV P+ LE P ++ SED LL L ++ FSG K+ G AHCYCG+QFG FAGQLGDGA M LGEV G E+QLKGAG TPYSRSADGRKVLRSS+REFL SE MH LGIP+TRA V S STV RDMFYDG E+C+V+ R+ TFLRFGSFEIF++ D TG GPS G +E+L L YT FFP + Sbjct: 33 ETLKFDNLALKTLPIDKEERNYVRT-VNGAVFSRVSPTPLESPELVVFSEDAMMLLDLPPSELERQDAAEYFSGNKLLPGSETAAHCYCGHQFGYFAGQLGDGAAMYLGEVINRKGERWEIQLKGAGLTPYSRSADGRKVLRSSLREFLCSEAMHYLGIPTTRAGTCVTSSSTVSRDMFYDGHPKDEKCSVILRIAPTFLRFGSFEIFKTLDSFTGRVGPSVGRKEILLQLLNYTVESFFPEI 274
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A7R9MP19_9ACAR (Selenoprotein O (Fragment) n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9MP19_9ACAR) HSP 1 Score: 257 bits (656), Expect = 1.380e-81 Identity = 132/244 (54.10%), Postives = 166/244 (68.03%), Query Frame = 1 Query: 1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732 +E LEF L+ LP+D E N+VRS V NA +SRV P+ L PR+++ S+ L+ + SE+FV +G K+ +G P +HCYCG+QFG+FAGQLGDGAV+ LGEV G E+QLKGAGRTPYSR ADGRKVLRSS+REFL SE MH LG +TRA V SD V+RDMFY G E C+V++R+ TFLRFGSFEIF++ DP TG GPS G ++L +L YT FFP + Sbjct: 7 LETLEFDNKALRRLPLDAIEDNYVRS-VSNACFSRVRPTPLSNPRLVSYSKSALKLIDISEEEVVSEDFVQYMTGNKLMSGSEPASHCYCGHQFGTFAGQLGDGAVIYLGEVVTSCGDRWEIQLKGAGRTPYSREADGRKVLRSSVREFLCSEAMHGLGGATTRAATCVISDDKVVRDMFYKGEPTLEYCSVISRLAPTFLRFGSFEIFKTVDPMTGRRGPSVGRNDILLSLIEYTIETFFPEI 249
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A5A8BZY5_CAFRO (Selenoprotein O n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BZY5_CAFRO) HSP 1 Score: 270 bits (690), Expect = 1.280e-79 Identity = 139/245 (56.73%), Postives = 178/245 (72.65%), Query Frame = 1 Query: 7 GLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASE--EFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHVI 735 L F L++LP+D + +N VR PV +A +SRV P+ ++KPR++A SE ALLGL EA+E + SG K+P G P+A+CYCGYQFG F+GQLGDGA M LGEV G E+QLKGAG+TPYSR+ADGRKVLRSS+REFL SE MH+LG+P+TRA VV SDST++RD+FY GR E+C+V+TR+ TFLRFGSFEIF++ DP TG AGPS GN +LL + YT + FF ++ Sbjct: 673 SLRFDNRALRVLPVDADATNSVRDPVADACFSRVKPTPVDKPRMVAASESALALLGLPLS-EAAERADGAEYLSGNKLPDGADPVANCYCGYQFGYFSGQLGDGAAMTLGEVVNDAGERYELQLKGAGKTPYSRTADGRKVLRSSLREFLCSEAMHSLGVPTTRAGSVVTSDSTIVRDVFYTGRPEAEQCSVITRMAPTFLRFGSFEIFKAKDPTTGRAGPSPGNLDLLNRMVDYTCNAFFKDIV 916
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A6J8AYH4_MYTCO (Selenoprotein O n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AYH4_MYTCO) HSP 1 Score: 260 bits (664), Expect = 1.920e-79 Identity = 132/244 (54.10%), Postives = 169/244 (69.26%), Query Frame = 1 Query: 1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732 +E L F L+ LPIDP N+VRS V A +S+V P+ ++KP ++AVS+ LLG+ ++FV FSG K+ G P AHCYCG+QFG F+GQLGDGA M LGEV +G E+Q KGAG+TPYSR+ADGRKVLRS+IREFL SE +H LGIP+TRA V S+STV+RD+FY G + E+C VV R+ TFLRFGSFEIF++ DP TG AGPS G ++L + YT F+P + Sbjct: 4 LETLNFDNSALRSLPIDPVTDNYVRS-VAGACFSKVKPTPVDKPSLVAVSQPALDLLGIPPPETNRDDFVQFFSGNKLLPGSDPAAHCYCGHQFGYFSGQLGDGATMYLGEVINKNGERWEIQFKGAGKTPYSRTADGRKVLRSTIREFLCSEAIHHLGIPTTRAGTCVTSESTVVRDIFYSGDPIEEKCTVVLRIAPTFLRFGSFEIFKTLDPQTGRAGPSVGRNDILIQMLEYTVQTFYPEI 246
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A836CN66_9STRA (Selenoprotein O n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN66_9STRA) HSP 1 Score: 258 bits (658), Expect = 8.410e-79 Identity = 132/242 (54.55%), Postives = 163/242 (67.36%), Query Frame = 1 Query: 1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFP 726 ++ L F +K LP+DPEE NFVR V NA +S+V P+ + P+++A+S+D LLGL + SG K+ G +P AHCYCG+QFGSF+GQLGDGA M LGEV G E+Q KGAG TPYSR DGRKVLRSSIREFL SE MH LGIP+TRA +V SD+ V RD+FY G + ER +V R+ TFLRFGSFEIF+ DP TG GPS GN +LL+ + Y+ S FFP Sbjct: 5 LDSLPFDNVAVKALPVDPEERNFVRPAVPNACFSKVAPAPVRDPKIVAISQDAMDLLGLSSCEVNRPDAAEYLSGNKLFPGASPHAHCYCGHQFGSFSGQLGDGAAMYLGEVVNERGERWEMQFKGAGPTPYSRRGDGRKVLRSSIREFLCSEAMHYLGIPTTRAASMVTSDTLVQRDLFYTGDVINERATIVLRIAPTFLRFGSFEIFKGTDPTTGRRGPSEGNVDLLKKMLHYSLSTFFP 246
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A443RR32_9ACAR (Selenoprotein O n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A443RR32_9ACAR) HSP 1 Score: 257 bits (657), Expect = 2.920e-78 Identity = 130/245 (53.06%), Postives = 166/245 (67.76%), Query Frame = 1 Query: 1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHVI 735 +E L F K LPID EE N+VR+ V NA +S+V P+ L+ P+++ S D L+ + ++FV F G K+ G PLAHCYCG+QFG FAGQLGDGA + LGE+ D E+QLKGAG TPYSRSADGRKVLRSSIRE+L SE MH LGIP+TRA + SD TV RD+FYDG E+C V++R+ +TF+RFGSFEIF+ DP TG GPS G ++ +TL Y F+PH++ Sbjct: 26 LETLNFDNKVYKCLPIDTEERNYVRT-VSNACFSKVKPTPLKNPKMVCYSLDALKLVDINENEVKRDDFVEYFVGNKLLPGSEPLAHCYCGHQFGVFAGQLGDGAAIYLGEIINEDNQRWELQLKGAGLTPYSRSADGRKVLRSSIREYLCSEAMHYLGIPTTRAGTCITSDETVERDIFYDGHPKNEKCTVISRIAQTFIRFGSFEIFKVMDPMTGRRGPSVGRYDIFKTLLDYVVETFYPHIV 269
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: UPI000C6D134E (selenoprotein O-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D134E) HSP 1 Score: 256 bits (655), Expect = 3.320e-78 Identity = 134/244 (54.92%), Postives = 164/244 (67.21%), Query Frame = 1 Query: 1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732 ++ L F ++ LPIDP E N+VR+ VRNA +SRV P+ +E P +A S LL L ++F FSG K+ G P AHCYCG+QFG F+GQLGDGA M LGEV G E+QLKGAG+TPYSR ADGRKVLRSSIREFL SE MH LGIP+TRA V SD+ V+RD+FYDG V ERC +V+R+ TFLRFGSFEIF++ D TG GPS G ++L + YT FFP + Sbjct: 4 LDRLRFDNLAIRELPIDPVEENYVRN-VRNACFSRVEPTPVENPVTVAYSIGAFQLLDLPESELRRDDFSQYFSGNKLLKGSEPAAHCYCGHQFGYFSGQLGDGAAMYLGEVINSRGERWEIQLKGAGKTPYSRQADGRKVLRSSIREFLCSEAMHYLGIPTTRAGSCVTSDTKVIRDIFYDGHPVLERCTIVSRIAPTFLRFGSFEIFKTIDEFTGRVGPSVGRTDILMKMLEYTIKTFFPEI 246
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A814ZV49_ADIRI (Selenoprotein O n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A814ZV49_ADIRI) HSP 1 Score: 257 bits (657), Expect = 3.370e-78 Identity = 129/245 (52.65%), Postives = 174/245 (71.02%), Query Frame = 1 Query: 1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGL-QRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732 +EG++F L+ LPIDP E+N+VRS V A +S+V P+ ++ P+++A S D L+ + + ++ ++ VFSG + GM P AHCYCG+QFG F+GQLGDGA M LGEV + E+Q KGAG+TPYSR+ADGRKVLRSSIREFL SE M+ LGIP+TRA V SD V+RD+FYDG A ERC ++TR+ +TF+RFGSFEIF++ DP TG GPS G ++L+TL Y + F+P + Sbjct: 33 MEGIKFDNLALRTLPIDPVEANYVRS-VSGACFSKVKPTPVKNPKLVAYSADALKLIDVGEDALKEEKQLAQVFSGNVLLPGMDPAAHCYCGHQFGYFSGQLGDGATMYLGEVINKNNERWELQFKGAGKTPYSRTADGRKVLRSSIREFLCSEAMYYLGIPTTRAGTCVTSDDYVIRDIFYDGNAKQERCTIITRIAQTFIRFGSFEIFKTLDPMTGRRGPSLGRNDILKTLLDYVVATFYPEI 276
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: UPI001402BBC7 (protein adenylyltransferase SelO, mitochondrial n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001402BBC7) HSP 1 Score: 257 bits (657), Expect = 3.810e-78 Identity = 137/247 (55.47%), Postives = 166/247 (67.21%), Query Frame = 1 Query: 1 VEGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQ--RGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHVI 735 +E L F L+ LP+DP + R V A++SRV PS +E+PRV+A+S LLGL+ A E SG +VP G P AHCYCG+QFGSFAGQLGDGA M LGEVQ G EVQLKGAG TPYSR +DGRKVLRSS+REFL SE MH LG+P+TRA V S STVLRD+ YDG A PE+C+VV R+ +FLRFGSFEIF+S D TG GPSAG ++ T+ Y F+P ++ Sbjct: 51 LETLRFDNSALRRLPLDPSDDPAPRQ-VPGAVFSRVRPSPVERPRVVAISVPALRLLGLRDPEAEAARPEAAEFLSGNRVPPGAQPAAHCYCGHQFGSFAGQLGDGAAMYLGEVQPGPGQRWEVQLKGAGPTPYSRHSDGRKVLRSSLREFLCSEAMHHLGVPTTRAGSCVTSHSTVLRDVHYDGNARPEQCSVVLRIAPSFLRFGSFEIFKSTDKDTGRTGPSAGREDIKVTMLDYVIDTFYPELL 296
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Match: A0A1E1XCD7_9ACAR (Selenoprotein O n=2 Tax=Amblyomma TaxID=6942 RepID=A0A1E1XCD7_9ACAR) HSP 1 Score: 254 bits (650), Expect = 1.320e-77 Identity = 135/243 (55.56%), Postives = 162/243 (66.67%), Query Frame = 1 Query: 4 EGLEFAMPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLGLQRGVEASEEFVNVFSGGKVPAGMTPLAHCYCGYQFGSFAGQLGDGAVMLLGEVQCVDGVWREVQLKGAGRTPYSRSADGRKVLRSSIREFLASEHMHALGIPSTRALCVVGSDSTVLRDMFYDGRAVPERCAVVTRVGETFLRFGSFEIFRSADPHTGEAGPSAGNRELLQTLFRYTTSRFFPHV 732 E L+F L+ LPID EE N+VR+ V A++SRV P+ LE P V+ SED LL L ++ FSG K+ G AHCYCG+QFG FAGQLGDGA M LGEV G E+QLKGAG TPYSRSADGRKVLRSS+REFL SE MH LG+P+TRA V S +TV RDMFYDG E+C+V+ R+ TFLRFGSFEIF++ D TG GPS G +E+L L Y+ FFP + Sbjct: 5 ETLKFDNVALRTLPIDKEERNYVRT-VSGAVFSRVSPTPLECPEVVVFSEDAMLLLDLPPSELERQDAAEYFSGNKLLPGSETAAHCYCGHQFGYFAGQLGDGAAMYLGEVINHKGERWEIQLKGAGLTPYSRSADGRKVLRSSLREFLCSEAMHYLGVPTTRAGTCVTSSTTVSRDMFYDGHPRDEKCSVILRIAPTFLRFGSFEIFKTLDNFTGRVGPSVGRKEILLQLLNYSVETFFPEI 246 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79284.18616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79284.18616.1 >prot_M-pyrifera_M_contig79284.18616.1 ID=prot_M-pyrifera_M_contig79284.18616.1|Name=mRNA_M-pyrifera_M_contig79284.18616.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp MPQLKMLPIDPEESNFVRSPVRNAIYSRVMPSALEKPRVLAVSEDVRALLback to top mRNA from alignment at M-pyrifera_M_contig79284:36..881- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79284.18616.1 ID=mRNA_M-pyrifera_M_contig79284.18616.1|Name=mRNA_M-pyrifera_M_contig79284.18616.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig79284:36..881- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79284:36..881- >mRNA_M-pyrifera_M_contig79284.18616.1 ID=mRNA_M-pyrifera_M_contig79284.18616.1|Name=mRNA_M-pyrifera_M_contig79284.18616.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig79284:36..881- (Macrocystis pyrifera P11B4 male)back to top |