prot_M-pyrifera_M_contig79265.18605.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79265.18605.1
Unique Nameprot_M-pyrifera_M_contig79265.18605.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length88
Homology
BLAST of mRNA_M-pyrifera_M_contig79265.18605.1 vs. uniprot
Match: Q54BY9_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54BY9_DICDI)

HSP 1 Score: 54.3 bits (129), Expect = 1.530e-6
Identity = 27/85 (31.76%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    4 VRKRVATELLETEKNYVKNMEQVIQLLVGPVLNASKQGMRIMKDSEFFSCFANLPQLTAHHASFCAKLTERIEENWTDEVTIGDI 88
            +R+R+A ELL TEK+YV N++ +I + + P++N +    R++  SE    F N  +L   ++     +  +++ NW+ + TIGD+
Sbjct:  286 MRRRIAQELLSTEKSYVYNLKLIIDIFIRPLINFNSIEQRVLSVSEISGVFGNWERLYKINSDLLVLIQCKLD-NWSIDQTIGDL 369          
BLAST of mRNA_M-pyrifera_M_contig79265.18605.1 vs. uniprot
Match: UPI002025D51D (LOW QUALITY PROTEIN: FYVE, RhoGEF and PH domain-containing protein 2 n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002025D51D)

HSP 1 Score: 50.4 bits (119), Expect = 3.490e-5
Identity = 29/88 (32.95%), Postives = 47/88 (53.41%), Query Frame = 0
Query:    1 QNTVRKRVATELLETEKNYVKNMEQVIQLLVGPVLNASKQGMRIMKDSEFFSCFANLPQLTAHHASFCAKLTERIEENWTDEVTIGDI 88
            Q++  K++A ELLETEK YV  +  + Q+    ++NA++ G  I +D      F+N+  +   H+ F     ++  ENW     IGDI
Sbjct:  110 QDSEEKKIALELLETEKAYVGRLHLLDQVFFSELMNAARNGKTIPEDVVKM-IFSNISSIYQFHSQFFLPELQKRMENWDSNSRIGDI 196          
BLAST of mRNA_M-pyrifera_M_contig79265.18605.1 vs. uniprot
Match: A0A1X7UJQ9_AMPQE (DH domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UJQ9_AMPQE)

HSP 1 Score: 50.1 bits (118), Expect = 3.910e-5
Identity = 30/88 (34.09%), Postives = 45/88 (51.14%), Query Frame = 0
Query:    1 QNTVRKRVATELLETEKNYVKNMEQVIQLLVGPVLNASKQGMRIMKDSEFFSCFANLPQLTAHHASFCAKLTERIEENWTDEVTIGDI 88
            Q+T R  +  ELL TEKN+VK + + ++ L  P     ++G +++ +    S F N+P +   H      L ERI  NW     IGDI
Sbjct:  101 QDTARYHIVKELLTTEKNFVKILNEFMKPLATP----GQRGGQLLTNENVKSIFGNIPDILRVHTDIMNGLEERIN-NWESNTCIGDI 183          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79265.18605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Q54BY9_DICDI1.530e-631.76Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
UPI002025D51D3.490e-532.95LOW QUALITY PROTEIN: FYVE, RhoGEF and PH domain-co... [more]
A0A1X7UJQ9_AMPQE3.910e-534.09DH domain-containing protein n=1 Tax=Amphimedon qu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035899Dbl homology (DH) domain superfamilyGENE3D1.20.900.10coord: 1..88
e-value: 7.9E-15
score: 56.9
IPR035899Dbl homology (DH) domain superfamilySUPERFAMILY48065DBL homology domain (DH-domain)coord: 4..88
IPR000219Dbl homology (DH) domainPFAMPF00621RhoGEFcoord: 8..88
e-value: 6.6E-11
score: 42.8
IPR000219Dbl homology (DH) domainPROSITEPS50010DH_2coord: 4..88
score: 12.031
IPR026817Guanine nucleotide exchange factor Ect2PANTHERPTHR16777EPITHELIAL CELL TRANSFORMING-2 ECT-2coord: 2..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79265contigM-pyrifera_M_contig79265:6..269 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79265.18605.1mRNA_M-pyrifera_M_contig79265.18605.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79265 6..269 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79265.18605.1 ID=prot_M-pyrifera_M_contig79265.18605.1|Name=mRNA_M-pyrifera_M_contig79265.18605.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp
QNTVRKRVATELLETEKNYVKNMEQVIQLLVGPVLNASKQGMRIMKDSEF
FSCFANLPQLTAHHASFCAKLTERIEENWTDEVTIGDI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035899DBL_dom_sf
IPR000219DH-domain
IPR026817Ect2