mRNA_M-pyrifera_M_contig79152.18583.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: D7G872_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G872_ECTSI) HSP 1 Score: 257 bits (656), Expect = 7.880e-77 Identity = 120/155 (77.42%), Postives = 140/155 (90.32%), Query Frame = 1 Query: 1 SYRYDGAMELSLHLVWKVVPGVIERTASESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMVMVRKCTIIGMAAGLSAFFGVQLGG 465 ++ YDGAMELSL +VWKV+PG +ER A ++E GL ++S+WGFLYT+A S+ LATAAG SIK+LGFPGDLP+V+HCVH+LGYVPM QTLPMI SLFSIAAGGSLGPEAPLVAVSAS +G++SMHYF HDMVMVRKCTIIGM+AGLSAFFGVQLGG Sbjct: 62 AFVYDGAMELSLKIVWKVIPGYLERIAEQAEDGLAMLSKWGFLYTIAASIFLATAAGASIKFLGFPGDLPDVVHCVHELGYVPMCQTLPMICCSLFSIAAGGSLGPEAPLVAVSASVSGYISMHYFNHDMVMVRKCTIIGMSAGLSAFFGVQLGG 216
BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A836CDB9_9STRA (Chloride channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDB9_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.100e-32 Identity = 78/152 (51.32%), Postives = 91/152 (59.87%), Query Frame = 1 Query: 10 YDGAMELSLHLVWKVVPGVIERTASESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMVMVRKCTIIGMAAGLSAFFGVQLGG 465 YD AME L LVW+ VP A+E+ G W LYT+ +V L+ AAG SIK LGFPGDLPNV+ CVH+ G VP+ Q M SLFSIAAG SLGPEAPL MVRK T++GM+AGL+AFFGV LGG Sbjct: 48 YDYAMESLLKLVWEQVPA-----AAEALWGPPGAYAW--LYTLLMAVLLSAAAGASIKLLGFPGDLPNVVECVHRHGCVPLRQAPAMAACSLFSIAAGASLGPEAPLAPS------------------MVRKATLMGMSAGLAAFFGVPLGG 174
BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A5J4XNN3_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XNN3_9CHLO) HSP 1 Score: 122 bits (306), Expect = 1.480e-29 Identity = 60/159 (37.74%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 1 SYRYDGAMELSLHLVWKVVPGVIERTA----SESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMVMVRKCTIIGMAAGLSAFFGVQLGG 465 ++ Y+ E +HL W++ P + A S VS+ ++YTV S + AG+ + LG PGDLP+ + +H+ GY+ + ++ M S FSIAAGGSLGPEAPL+A+ + W ++ +R C ++GM AGL+AFFGV LGG Sbjct: 60 AWIYNSFFEAVVHLAWEIAPEKLVAPALTHLSNKVSWFPAVSKVAWVYTVLLSTTFGFLAGLVQRLLGSPGDLPDTVRDIHEQGYISINKSPSMFLCSTFSIAAGGSLGPEAPLLALCGATCSWFGKSVLRYKGQKLRNCALLGMTAGLAAFFGVALGG 218
BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A1X6PBU2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBU2_PORUM) HSP 1 Score: 122 bits (306), Expect = 1.540e-29 Identity = 72/157 (45.86%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 1 SYRYDGAMELSLHLVWKVVP-GVIERTASESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFK-HDMVMVRKCTIIGMAAGLSAFFGVQLGG 465 ++ Y +EL L L W+ +P G+I+ I S +L+ T + A+ G+SI +LGFPGDL ++CVH+LGYVPM MI S SI AGGSLGPEAPLVA+ AS GW+SM F +R T+ GMA L+AFFGV LGG Sbjct: 83 AWIYYSILELLLDLFWEKLPEGLIKAFPG-------IPSSLYWLWIPVTGMMFASMVGISIYFLGFPGDLGYTVNCVHELGYVPMGHAPSMIVSSQASILAGGSLGPEAPLVAICASIAGWVSMVLFGVSGRKRLRAHTLSGMACALAAFFGVPLGG 232
BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A8J9WP55_9CHLO (Probable chloride channel protein CLC-e n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP55_9CHLO) HSP 1 Score: 122 bits (306), Expect = 1.590e-29 Identity = 65/162 (40.12%), Postives = 92/162 (56.79%), Query Frame = 1 Query: 1 SYRYDGAMELSLHLVWKVVPGVIERTASESEGGLDIVSRW-------GFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMVMVRKCTIIGMAAGLSAFFGVQLGG 465 ++ YD E L +VW+V+P ++ + L+ W ++YT+A + + T GV+ + LG PGDLP V+H +H G + + Q M S FSIAAGGSLGPEA L+A+ S T WL+ F +R C ++GM AGL+AFFGV LGG Sbjct: 75 AFVYDTYFEAILKVVWEVMP---DQVVTPLVNNLNTNLSWFPPLEKVAWVYTLAVATIMGTLVGVTQRVLGSPGDLPEVVHQIHTSGRIAISQAPSMFVCSAFSIAAGGSLGPEAALLALCGSTTSWLARKVFGARGQHLRNCALMGMTAGLAAFFGVALGG 233
BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: R7QI83_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI83_CHOCR) HSP 1 Score: 122 bits (306), Expect = 1.820e-29 Identity = 70/156 (44.87%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 1 SYRYDGAMELSLHLVWKVVPGVIERTASESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMV-MVRKCTIIGMAAGLSAFFGVQLGG 465 ++ Y +E L +WK +P E+ A L W ++ V + A GVSIK +GFPGDL + CVHK+GYVP+ M+ S SI GGSLGPEAPLVA+ AS GW+S++ FK +VRK T+ GMA L+AFFGV LGG Sbjct: 105 AFLYYTMLEFFLEFLWKTLP---EQLAESFPMWLPCF-HWVWIPIVG--MICAILVGVSIKVMGFPGDLAYTVKCVHKMGYVPIGHAPAMVASSQLSILGGGSLGPEAPLVAICASIAGWVSIYLFKQKYKNVVRKHTLCGMACALAAFFGVPLGG 254
BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A7S0BQK1_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQK1_9RHOD) HSP 1 Score: 121 bits (304), Expect = 2.390e-29 Identity = 69/157 (43.95%), Postives = 91/157 (57.96%), Query Frame = 1 Query: 1 SYRYDGAMELSLHLVWKVVP-GVIERTASESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMV-MVRKCTIIGMAAGLSAFFGVQLGG 465 +Y Y A+E L + W +P G++ E W L+ ++ A G+SI+ LGFPGDL + CVH+ GYV M T M+ S FSI AG SLGPEAPLVA+ A+ GW+S + FKH ++RK T+ GMA L+AFFGV LGG Sbjct: 57 AYLYYTALEWLLEIFWLKLPQGLVVDNPIWPEN-----LYW--LWIPIVCLTFAGLVGLSIEVLGFPGDLAYTVKCVHEFGYVDMGHTPSMVVASQFSIIAGASLGPEAPLVAICAAIAGWVSRNLFKHTQKNLIRKHTLCGMACALAAFFGVPLGG 206
BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: I0YW15_COCSC (Clc chloride channel n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YW15_COCSC) HSP 1 Score: 120 bits (300), Expect = 1.490e-28 Identity = 63/159 (39.62%), Postives = 92/159 (57.86%), Query Frame = 1 Query: 1 SYRYDGAMELSLHLVWKVVPGVIERTA----SESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMVMVRKCTIIGMAAGLSAFFGVQLGG 465 ++ YD E L LVW+V+P + + + + + ++YT+A + + T GV+ ++LG PGDLP V+H +H G + + Q M S FSIAAGGSLGPEA L+A+ S T +L+ F +R C ++GM AGL+AFFGV LGG Sbjct: 74 AFVYDTYFEAILKLVWEVMPHQVVTPLVNHLNTNVSWFPSLDKVAWVYTLAIATLMGTLVGVTQRFLGSPGDLPEVVHQIHTSGRIAISQAPSMFVCSAFSIAAGGSLGPEAALLALCGSTTSYLARKVFGARGQHLRNCALMGMTAGLAAFFGVALGG 232
BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A7S2LJU1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LJU1_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.720e-28 Identity = 69/153 (45.10%), Postives = 89/153 (58.17%), Query Frame = 1 Query: 16 GAMELSLHLVWKVVPGVIERTASESEGGLDIV--SRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKH-DMVMVRKCTIIGMAAGLSAFFGVQLGG 465 GA L +W V+ + +S G D V S W FL+ +++ G+S+KYLG PGDL V+ CVH Y+ +PMI S FSI GGSLGPEAPLVA+ A GWLS + FK + +VRK T++GM A L+AFFG LGG Sbjct: 133 GAALLYYKSLWAVLDYLWHDLPQDS-GFKDAVPESLW-FLWIAIIGFTMSAGVGLSVKYLGEPGDLAYVVKCVHNDAYIHESHMIPMIAASQFSILGGGSLGPEAPLVAICAGVAGWLSRNVFKTVNKNVVRKHTLMGMCAALAAFFGAPLGG 283
BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A1E7EV89_9STRA (Clc chloride channel n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EV89_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.690e-26 Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 124 FLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMV-MVRKCTIIGMAAGLSAFFGVQLGG 465 +L+ S S+ T G+++ Y+G PGDLP I VH ++PM PM+F SLFSI AGGSLGPEAPLVA+ + G++S F+ +VRK T +GM+ L+AFFGV LGG Sbjct: 250 WLWIPLVSFSMVTLVGLTVIYMGEPGDLPYTISRVHAEAFIPMNHVTPMVFASLFSILAGGSLGPEAPLVAICGALGGFVSRRIFRQTSTNVVRKHTFMGMSGALAAFFGVPLGG 364 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79152.18583.1 >prot_M-pyrifera_M_contig79152.18583.1 ID=prot_M-pyrifera_M_contig79152.18583.1|Name=mRNA_M-pyrifera_M_contig79152.18583.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp MELSLHLVWKVVPGVIERTASESEGGLDIVSRWGFLYTVATSVSLATAAGback to top mRNA from alignment at M-pyrifera_M_contig79152:261..725+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79152.18583.1 ID=mRNA_M-pyrifera_M_contig79152.18583.1|Name=mRNA_M-pyrifera_M_contig79152.18583.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig79152:261..725+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79152:261..725+ >mRNA_M-pyrifera_M_contig79152.18583.1 ID=mRNA_M-pyrifera_M_contig79152.18583.1|Name=mRNA_M-pyrifera_M_contig79152.18583.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig79152:261..725+ (Macrocystis pyrifera P11B4 male)back to top |