prot_M-pyrifera_M_contig79152.18583.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig79152.18583.1
Unique Name	prot_M-pyrifera_M_contig79152.18583.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	148

Homology

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BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: D7G872_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G872_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.760e-73
Identity = 116/148 (78.38%), Postives = 134/148 (90.54%), Query Frame = 0

Query:    1 MELSLHLVWKVVPGVIERTASESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMVMVRKCTIIGMAAGLSAFFGVQLGG 148
            MELSL +VWKV+PG +ER A ++E GL ++S+WGFLYT+A S+ LATAAG SIK+LGFPGDLP+V+HCVH+LGYVPM QTLPMI  SLFSIAAGGSLGPEAPLVAVSAS +G++SMHYF HDMVMVRKCTIIGM+AGLSAFFGVQLGG
Sbjct:   69 MELSLKIVWKVIPGYLERIAEQAEDGLAMLSKWGFLYTIAASIFLATAAGASIKFLGFPGDLPDVVHCVHELGYVPMCQTLPMICCSLFSIAAGGSLGPEAPLVAVSASVSGYISMHYFNHDMVMVRKCTIIGMSAGLSAFFGVQLGG 216

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BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A836CDB9_9STRA (Chloride channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDB9_9STRA)

HSP 1 Score: 125 bits (315), Expect = 7.450e-31
Identity = 75/148 (50.68%), Postives = 88/148 (59.46%), Query Frame = 0

Query:    1 MELSLHLVWKVVPGVIERTASESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMVMVRKCTIIGMAAGLSAFFGVQLGG 148
            ME  L LVW+ VP      A+E+  G      W  LYT+  +V L+ AAG SIK LGFPGDLPNV+ CVH+ G VP+ Q   M   SLFSIAAG SLGPEAPL                     MVRK T++GM+AGL+AFFGV LGG
Sbjct:   52 MESLLKLVWEQVPA-----AAEALWGPPGAYAW--LYTLLMAVLLSAAAGASIKLLGFPGDLPNVVECVHRHGCVPLRQAPAMAACSLFSIAAGASLGPEAPLAPS------------------MVRKATLMGMSAGLAAFFGVPLGG 174

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BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A1X6PBU2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBU2_PORUM)

HSP 1 Score: 120 bits (302), Expect = 4.300e-29
Identity = 71/150 (47.33%), Postives = 90/150 (60.00%), Query Frame = 0

Query:    1 MELSLHLVWKVVP-GVIERTASESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFK-HDMVMVRKCTIIGMAAGLSAFFGVQLGG 148
            +EL L L W+ +P G+I+           I S   +L+   T +  A+  G+SI +LGFPGDL   ++CVH+LGYVPM     MI  S  SI AGGSLGPEAPLVA+ AS  GW+SM  F       +R  T+ GMA  L+AFFGV LGG
Sbjct:   90 LELLLDLFWEKLPEGLIKAFPG-------IPSSLYWLWIPVTGMMFASMVGISIYFLGFPGDLGYTVNCVHELGYVPMGHAPSMIVSSQASILAGGSLGPEAPLVAICASIAGWVSMVLFGVSGRKRLRAHTLSGMACALAAFFGVPLGG 232

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BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: R7QI83_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI83_CHOCR)

HSP 1 Score: 120 bits (302), Expect = 5.020e-29
Identity = 69/149 (46.31%), Postives = 88/149 (59.06%), Query Frame = 0

Query:    1 MELSLHLVWKVVPGVIERTASESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMV-MVRKCTIIGMAAGLSAFFGVQLGG 148
            +E  L  +WK +P   E+ A      L     W ++  V   +  A   GVSIK +GFPGDL   + CVHK+GYVP+     M+  S  SI  GGSLGPEAPLVA+ AS  GW+S++ FK     +VRK T+ GMA  L+AFFGV LGG
Sbjct:  112 LEFFLEFLWKTLP---EQLAESFPMWLPCF-HWVWIPIVG--MICAILVGVSIKVMGFPGDLAYTVKCVHKMGYVPIGHAPAMVASSQLSILGGGSLGPEAPLVAICASIAGWVSIYLFKQKYKNVVRKHTLCGMACALAAFFGVPLGG 254

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BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A5J4XNN3_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XNN3_9CHLO)

HSP 1 Score: 119 bits (299), Expect = 1.080e-28
Identity = 59/151 (39.07%), Postives = 86/151 (56.95%), Query Frame = 0

Query:    2 ELSLHLVWKVVPGVIERTA----SESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMVMVRKCTIIGMAAGLSAFFGVQLGG 148
            E  +HL W++ P  +   A    S        VS+  ++YTV  S +    AG+  + LG PGDLP+ +  +H+ GY+ + ++  M   S FSIAAGGSLGPEAPL+A+  +   W      ++    +R C ++GM AGL+AFFGV LGG
Sbjct:   68 EAVVHLAWEIAPEKLVAPALTHLSNKVSWFPAVSKVAWVYTVLLSTTFGFLAGLVQRLLGSPGDLPDTVRDIHEQGYISINKSPSMFLCSTFSIAAGGSLGPEAPLLALCGATCSWFGKSVLRYKGQKLRNCALLGMTAGLAAFFGVALGG 218

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BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A7S0BQK1_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQK1_9RHOD)

HSP 1 Score: 119 bits (298), Expect = 1.280e-28
Identity = 59/115 (51.30%), Postives = 76/115 (66.09%), Query Frame = 0

Query:   35 FLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMV-MVRKCTIIGMAAGLSAFFGVQLGG 148
            +L+     ++ A   G+SI+ LGFPGDL   + CVH+ GYV M  T  M+  S FSI AG SLGPEAPLVA+ A+  GW+S + FKH    ++RK T+ GMA  L+AFFGV LGG
Sbjct:   92 WLWIPIVCLTFAGLVGLSIEVLGFPGDLAYTVKCVHEFGYVDMGHTPSMVVASQFSIIAGASLGPEAPLVAICAAIAGWVSRNLFKHTQKNLIRKHTLCGMACALAAFFGVPLGG 206

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BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A8J9WP55_9CHLO (Probable chloride channel protein CLC-e n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP55_9CHLO)

HSP 1 Score: 118 bits (295), Expect = 4.070e-28
Identity = 63/154 (40.91%), Postives = 88/154 (57.14%), Query Frame = 0

Query:    2 ELSLHLVWKVVPGVIERTASESEGGLDIVSRW-------GFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMVMVRKCTIIGMAAGLSAFFGVQLGG 148
            E  L +VW+V+P   ++  +     L+    W        ++YT+A +  + T  GV+ + LG PGDLP V+H +H  G + + Q   M   S FSIAAGGSLGPEA L+A+  S T WL+   F      +R C ++GM AGL+AFFGV LGG
Sbjct:   83 EAILKVVWEVMP---DQVVTPLVNNLNTNLSWFPPLEKVAWVYTLAVATIMGTLVGVTQRVLGSPGDLPEVVHQIHTSGRIAISQAPSMFVCSAFSIAAGGSLGPEAALLALCGSTTSWLARKVFGARGQHLRNCALMGMTAGLAAFFGVALGG 233

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BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A7S2LJU1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LJU1_9STRA)

HSP 1 Score: 117 bits (294), Expect = 5.060e-28
Identity = 60/119 (50.42%), Postives = 76/119 (63.87%), Query Frame = 0

Query:   31 SRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKH-DMVMVRKCTIIGMAAGLSAFFGVQLGG 148
            S W FL+      +++   G+S+KYLG PGDL  V+ CVH   Y+     +PMI  S FSI  GGSLGPEAPLVA+ A   GWLS + FK  +  +VRK T++GM A L+AFFG  LGG
Sbjct:  166 SLW-FLWIAIIGFTMSAGVGLSVKYLGEPGDLAYVVKCVHNDAYIHESHMIPMIAASQFSILGGGSLGPEAPLVAICAGVAGWLSRNVFKTVNKNVVRKHTLMGMCAALAAFFGAPLGG 283

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BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: I0YW15_COCSC (Clc chloride channel n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YW15_COCSC)

HSP 1 Score: 115 bits (289), Expect = 3.520e-27
Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 0

Query:    2 ELSLHLVWKVVPGVIERTA----SESEGGLDIVSRWGFLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMVMVRKCTIIGMAAGLSAFFGVQLGG 148
            E  L LVW+V+P  +        + +      + +  ++YT+A +  + T  GV+ ++LG PGDLP V+H +H  G + + Q   M   S FSIAAGGSLGPEA L+A+  S T +L+   F      +R C ++GM AGL+AFFGV LGG
Sbjct:   82 EAILKLVWEVMPHQVVTPLVNHLNTNVSWFPSLDKVAWVYTLAIATLMGTLVGVTQRFLGSPGDLPEVVHQIHTSGRIAISQAPSMFVCSAFSIAAGGSLGPEAALLALCGSTTSYLARKVFGARGQHLRNCALMGMTAGLAAFFGVALGG 232

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BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Match: A0A1E7EV89_9STRA (Clc chloride channel n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EV89_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.100e-26
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 0

Query:   35 FLYTVATSVSLATAAGVSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPEAPLVAVSASATGWLSMHYFKHDMV-MVRKCTIIGMAAGLSAFFGVQLGG 148
            +L+    S S+ T  G+++ Y+G PGDLP  I  VH   ++PM    PM+F SLFSI AGGSLGPEAPLVA+  +  G++S   F+     +VRK T +GM+  L+AFFGV LGG
Sbjct:  250 WLWIPLVSFSMVTLVGLTVIYMGEPGDLPYTISRVHAEAFIPMNHVTPMVFASLFSILAGGSLGPEAPLVAICGALGGFVSRRIFRQTSTNVVRKHTFMGMSGALAAFFGVPLGG 364

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig79152.18583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G872_ECTSI	1.760e-73	78.38	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CDB9_9STRA	7.450e-31	50.68	Chloride channel n=1 Tax=Tribonema minus TaxID=303...	[more]
A0A1X6PBU2_PORUM	4.300e-29	47.33	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
R7QI83_CHOCR	5.020e-29	46.31	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]
A0A5J4XNN3_9CHLO	1.080e-28	39.07	Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2...	[more]
A0A7S0BQK1_9RHOD	1.280e-28	51.30	Hypothetical protein n=2 Tax=Rhodosorus marinus Ta...	[more]
A0A8J9WP55_9CHLO	4.070e-28	40.91	Probable chloride channel protein CLC-e n=1 Tax=Co...	[more]
A0A7S2LJU1_9STRA	5.060e-28	50.42	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
I0YW15_COCSC	3.520e-27	40.40	Clc chloride channel n=1 Tax=Coccomyxa subellipsoi...	[more]
A0A1E7EV89_9STRA	2.100e-26	48.70	Clc chloride channel n=1 Tax=Fragilariopsis cylind...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014743	Chloride channel, core	GENE3D	1.10.3080.10		coord: 5..148 e-value: 1.7E-11 score: 45.7
IPR014743	Chloride channel, core	SUPERFAMILY	81340	Clc chloride channel	coord: 30..148
IPR001807	Chloride channel, voltage gated	PFAM	PF00654	Voltage_CLC	coord: 61..148 e-value: 9.5E-12 score: 44.8
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..58
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 79..97
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 59..78
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 120..130
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 98..102
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 103..119
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..34
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 131..147
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 148..148

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig79152	contig	M-pyrifera_M_contig79152:282..725 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig79152.18583.1	mRNA_M-pyrifera_M_contig79152.18583.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig79152 261..725 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig79152.18583.1 ID=prot_M-pyrifera_M_contig79152.18583.1|Name=mRNA_M-pyrifera_M_contig79152.18583.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp
MELSLHLVWKVVPGVIERTASESEGGLDIVSRWGFLYTVATSVSLATAAG
VSIKYLGFPGDLPNVIHCVHKLGYVPMEQTLPMIFVSLFSIAAGGSLGPE
APLVAVSASATGWLSMHYFKHDMVMVRKCTIIGMAAGLSAFFGVQLGG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014743	Cl-channel_core
IPR001807	Cl-channel_volt-gated