prot_M-pyrifera_M_contig79081.18573.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79081.18573.1
Unique Nameprot_M-pyrifera_M_contig79081.18573.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length250
Homology
BLAST of mRNA_M-pyrifera_M_contig79081.18573.1 vs. uniprot
Match: A0A7Z9PVR8_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PVR8_9BACT)

HSP 1 Score: 331 bits (849), Expect = 3.140e-112
Identity = 180/236 (76.27%), Postives = 196/236 (83.05%), Query Frame = 0
Query:   13 SIVSADVVTYSGPRDATRDQFNIDSDNLALLENFDSFVGETIVGDLPANGARFAPEYADGSVAPLPVTQPFAGAPSGSQWMKNFGNGRPPSSAWVIRPDNENDLIYAFGQVNAQGDWVRIDGFDADDNLIVSVDAQPIVAGCFAGFIVREGVSKVVVTPLGNFDGLNGMDDVQVATTPIDLCDVDLNCDGDLDIFDVIEFIEAFNAEDPRADFLPNGVXXXXXXXXXXXXFEEGCP 248
            S+V ADVVTYSGP  ATRDQFN DSD LALLE+F+SF G   VGD+P NGARFA EYADGS APLP+ Q    APSGS+WM+NFGNGRP  +AWVIRPD+ +DLIYAFGQVNAQGDWVRI+GFDADDNLIVSVDAQPI+  CFAGFIVREGVSKVVVTPLGN D  NGMDDVQV+T  I+LCDVDLNCDG+LD FDV  FI A+NA DPRADF     XXXXXXXXXXXX   GCP
Sbjct:   15 SVVCADVVTYSGPLTATRDQFNADSDGLALLEDFESFSGGQAVGDMPGNGARFAEEYADGSSAPLPIIQATFAAPSGSRWMQNFGNGRPFGAAWVIRPDDPDDLIYAFGQVNAQGDWVRIEGFDADDNLIVSVDAQPIL--CFAGFIVREGVSKVVVTPLGNGDFANGMDDVQVSTQEINLCDVDLNCDGNLDFFDVSAFIAAYNAMDPRADFTGXXXXXXXXXXXXXXXXXAGCP 248          
BLAST of mRNA_M-pyrifera_M_contig79081.18573.1 vs. uniprot
Match: A0A3D4UN49_9BACT (Uncharacterized protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UN49_9BACT)

HSP 1 Score: 318 bits (814), Expect = 7.080e-107
Identity = 168/240 (70.00%), Postives = 190/240 (79.17%), Query Frame = 0
Query:    9 LLLSSIVSADVVTYSGPRDATRDQFNIDSDNLALLENFDSFVGETIVGDLPANGARFAPEYADGSVAPLPVTQPFAGAPSGSQWMKNFGNGRPPSSAWVIRPDNENDLIYAFGQVNAQGDWVRIDGFDADDNLIVSVDAQPIVAGCFAGFIVREGVSKVVVTPLGNFDGLNGMDDVQVATTPIDLCDVDLNCDGDLDIFDVIEFIEAFNAEDPRADFLPNGVXXXXXXXXXXXXFEEGCP 248
            + LS +  ADVVTYSGP +ATR QFN  +   A LE+F++F     VGD+P NGARFAPEY DG  APLP+ Q  A APSG +W+ NFGNGRP  SAWVIRPDN  DLIYAFGQVNAQGDWVRI+GFDADD L+VSVDAQPI+AGCFAGFIV +GVSKVVVTP+GNFDG NGMDDVQV+T+PI+ C VDLNCDG +D FD+ EFI A+ A DPRADF     XXXXXXXXXXXX   GCP
Sbjct:   11 MCLSPLAVADVVTYSGPLEATRSQFNSYTRGAASLEDFETFADGQEVGDMPGNGARFAPEYPDGLAAPLPLIQASANAPSGDRWLANFGNGRPAFSAWVIRPDNAGDLIYAFGQVNAQGDWVRIEGFDADDQLVVSVDAQPILAGCFAGFIVPDGVSKVVVTPVGNFDGFNGMDDVQVSTSPIEPCVVDLNCDGFIDFFDISEFIAAYTAMDPRADFTGXXXXXXXXXXXXXXXXXAGCP 250          
BLAST of mRNA_M-pyrifera_M_contig79081.18573.1 vs. uniprot
Match: UPI001AD31769 (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI001AD31769)

HSP 1 Score: 179 bits (454), Expect = 6.730e-53
Identity = 100/189 (52.91%), Postives = 120/189 (63.49%), Query Frame = 0
Query:    2 KTTLLCTLLLSSIVSADVVTYSGPRDATRDQFNIDSDNLALLENFDSFVGETIVGDLPANGARFAPEYADGSVAPLPVTQPFAGAPSGSQWMKNFGNGRPPSSAWVIRPDNENDLIYAFGQVNAQGDWVRIDGFDADDNLIVSVDAQPIVAGCFAGFIVREGVSKVVVTPLGNFDGLNGMDDVQVATTP 190
            +T  L    L+   SA  VT+SGP   TR  F   +      E F+SF    IVGD+P   A F+PEYADGS APLPV    +   S  +W+ NFGNGRP  S+WVIRPD   + IYAFGQVN+QGDWVRI  +DA + LI  VDA PI + CFAGF+    ++KVVVTPLGN DG NGMDDV V+  P
Sbjct:    4 RTGALMVCALAGQASASFVTFSGPLGTTRPAFEAAAGGSVPRETFESFANGAIVGDMPNVQAFFSPEYADGSPAPLPVVLNNSPVTS-PRWIGNFGNGRPFWSSWVIRPD-AGESIYAFGQVNSQGDWVRILAYDASNTLIGQVDASPI-SHCFAGFVSTTPIAKVVVTPLGNADGANGMDDVSVSIVP 189          
BLAST of mRNA_M-pyrifera_M_contig79081.18573.1 vs. uniprot
Match: A0A5C5W329_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium RAS1 TaxID=2528034 RepID=A0A5C5W329_9BACT)

HSP 1 Score: 72.8 bits (177), Expect = 7.240e-12
Identity = 54/157 (34.39%), Postives = 74/157 (47.13%), Query Frame = 0
Query:   43 LENFDSFVGETIVGDLPANGARFAPEYADGSVAPLPVTQPFAGAPSGSQWMKNFGNGRPPSS----AWVIRPDNENDLIYAFG-----QVNAQGDWVRIDGFDADDNLIVSVDAQPIVAGCFAGFIVREGVSKVVVTPLGNFDGLNGMDDVQVATTP 190
            LE+FDS+     V  LP     F          PLP  Q +  +   ++   N    RPP S     ++IRP+    LI A G        A  D +R+  FD +  ++ SVD  P     FAGF+V  G S+V ++ LGN DG NG DD+Q+ T P
Sbjct:   48 LEDFDSYSDGANVASLPGLHVSFDD--------PLPFAQAYEASHIFARSEPNQLANRPPDSDVNNPYIIRPE-PGLLISALGLWETSSTPAGIDQLRLTAFDGNGLILGSVDT-PFAGVAFAGFVVSSGASRVEISVLGNADGRNGFDDLQIGTVP 194          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79081.18573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7Z9PVR8_9BACT3.140e-11276.27Uncharacterized protein n=1 Tax=Phycisphaerales ba... [more]
A0A3D4UN49_9BACT7.080e-10770.00Uncharacterized protein n=2 Tax=Phycisphaerae TaxI... [more]
UPI001AD317696.730e-5352.91Uncharacterized protein n=1 Tax=Phycisphaerales ba... [more]
A0A5C5W329_9BACT7.240e-1234.39Uncharacterized protein n=1 Tax=Phycisphaerae bact... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 197..209
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.866

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79081contigM-pyrifera_M_contig79081:209..958 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79081.18573.1mRNA_M-pyrifera_M_contig79081.18573.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79081 209..958 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79081.18573.1 ID=prot_M-pyrifera_M_contig79081.18573.1|Name=mRNA_M-pyrifera_M_contig79081.18573.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=250bp
MKTTLLCTLLLSSIVSADVVTYSGPRDATRDQFNIDSDNLALLENFDSFV
GETIVGDLPANGARFAPEYADGSVAPLPVTQPFAGAPSGSQWMKNFGNGR
PPSSAWVIRPDNENDLIYAFGQVNAQGDWVRIDGFDADDNLIVSVDAQPI
VAGCFAGFIVREGVSKVVVTPLGNFDGLNGMDDVQVATTPIDLCDVDLNC
DGDLDIFDVIEFIEAFNAEDPRADFLPNGVFDIFDVIEYIRQFEEGCPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS