prot_M-pyrifera_M_contig78816.18516.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78816.18516.1
Unique Nameprot_M-pyrifera_M_contig78816.18516.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length44
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig78816.18516.1 vs. uniprot
Match: D7FX52_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX52_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 6.750e-13
Identity = 32/43 (74.42%), Postives = 41/43 (95.35%), Query Frame = 0 
Query:    2 LPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGATAVLSS 44
            LPH+LRQLLLQLSSV GD+F+ND+++KAYASFLV+GA AVL++
Sbjct:  288 LPHALRQLLLQLSSVHGDIFENDDQRKAYASFLVEGAAAVLAA 330
[Close]
BLAST of mRNA_M-pyrifera_M_contig78816.18516.1 vs. uniprot
Match: A0A6H5K5P3_9PHAE (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P3_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 6.750e-13
Identity = 32/43 (74.42%), Postives = 41/43 (95.35%), Query Frame = 0 
Query:    2 LPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGATAVLSS 44
            LPH+LRQLLLQLSSV GD+F+ND+++KAYASFLV+GA AVL++
Sbjct:  288 LPHALRQLLLQLSSVHGDIFENDDQRKAYASFLVEGAAAVLAA 330
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78816.18516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FX52_ECTSI6.750e-1374.42Importin N-terminal domain-containing protein n=1 ... [more]
A0A6H5K5P3_9PHAE6.750e-1374.42Importin N-terminal domain-containing protein n=1 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78816contigM-pyrifera_M_contig78816:336..467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78816.18516.1mRNA_M-pyrifera_M_contig78816.18516.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78816 336..467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78816.18516.1 ID=prot_M-pyrifera_M_contig78816.18516.1|Name=mRNA_M-pyrifera_M_contig78816.18516.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=44bp
NLPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGATAVLSS
back to top