|
Homology
BLAST of mRNA_M-pyrifera_M_contig7638.18009.1 vs. uniprot
Match: A0A6H5KLI3_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLI3_9PHAE) HSP 1 Score: 228 bits (581), Expect = 5.320e-71 Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 1
Query: 1 MSGRRDGTFFGDPGMRGNGPPNIEGMVTLKVDNVPYNSSIEDLRRTFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRLDGEFFAGRELRIQYAKRRRPEFSAGGGG 348
MSGRRDGTFFGDPGMRGNGPPNIEGM+TLKVDNVPYNSSI+DLRR FEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDR+DGEFFAGRELRIQYAK+RRPE S G GG
Sbjct: 1 MSGRRDGTFFGDPGMRGNGPPNIEGMITLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRMDGEFFAGRELRIQYAKKRRPEASGGYGG 116
BLAST of mRNA_M-pyrifera_M_contig7638.18009.1 vs. uniprot
Match: A0A6H5KI74_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI74_9PHAE) HSP 1 Score: 152 bits (384), Expect = 1.880e-41 Identity = 73/106 (68.87%), Postives = 87/106 (82.08%), Query Frame = 1
Query: 31 GDPGMRGNGPPNIEGMVTLKVDNVPYNSSIEDLRRTFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRLDGEFFAGRELRIQYAKRRRPEFSAGGGG 348
G RG+GPPNI+GMVTLKVDN+ + S E+LR FE G+LGDVY+PRD+RTGEPRGFAFVR++D+RDADDA+DRLDG F GRELRIQYA++RRP GGGG
Sbjct: 7 GGSDQRGSGPPNIDGMVTLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADDAVDRLDGTRFNGRELRIQYARKRRP----GGGG 108
BLAST of mRNA_M-pyrifera_M_contig7638.18009.1 vs. uniprot
Match: A0A6S7FVA8_PARCT (Serine arginine-rich splicing factor 2 n=2 Tax=Alcyonacea TaxID=40677 RepID=A0A6S7FVA8_PARCT) HSP 1 Score: 131 bits (329), Expect = 3.840e-34 Identity = 56/94 (59.57%), Postives = 76/94 (80.85%), Query Frame = 1
Query: 46 RGNGPPNIEGMVTLKVDNVPYNSSIEDLRRTFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRLDGEFFAGRELRIQYAKRRRPE 327
RG GPPNIEGM +LKVDN+ Y ++++DL++ F YG++GDVY+PRD RT + RGFAFVRF ++RDA+DA+DR+DG GRE+R+Q AK RP+
Sbjct: 5 RGRGPPNIEGMTSLKVDNLTYRTTVDDLKKVFRAYGDVGDVYIPRDARTNQSRGFAFVRFFERRDAEDAMDRVDGSVLDGREIRVQNAKYGRPQ 98
BLAST of mRNA_M-pyrifera_M_contig7638.18009.1 vs. uniprot
Match: UPI001B88AFA6 (serine/arginine-rich splicing factor 2-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88AFA6) HSP 1 Score: 130 bits (328), Expect = 4.100e-34 Identity = 60/98 (61.22%), Postives = 77/98 (78.57%), Query Frame = 1
Query: 49 GNGPPNIEGMVTLKVDNVPYNSSIEDLRRTFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRLDGEFFAGRELRIQYAKRRRPEFSAGG 342
G GPPN EGM++LKVDN+ Y ++ E+L+R FEKYG++GDVY+PRD T E RGFAFVRF D+RDA+DA+D +DG F GRELR+Q A+ RP+ GG
Sbjct: 4 GRGPPNSEGMISLKVDNLTYRTTPENLKRAFEKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDAMDSMDGAIFDGRELRVQTARYGRPDTRRGG 101
BLAST of mRNA_M-pyrifera_M_contig7638.18009.1 vs. uniprot
Match: T1J1U9_STRMM (RRM domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J1U9_STRMM) HSP 1 Score: 131 bits (329), Expect = 4.790e-34 Identity = 60/92 (65.22%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 49 GNGPPNIEGMVTLKVDNVPYNSSIEDLRRTFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRLDGEFFAGRELRIQYAKRRRP 324
G GPPNIEGM +LKVDN+ Y ++ EDLRR FEKYGE+GDVY+PRD T E RGFAFVRF D+RDA+DA++ +DG+ GRELR+Q A+ RP
Sbjct: 4 GRGPPNIEGMTSLKVDNLTYRTTPEDLRRAFEKYGEVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDALEAMDGQMLDGRELRVQMARYGRP 95
BLAST of mRNA_M-pyrifera_M_contig7638.18009.1 vs. uniprot
Match: A0A8J5KC64_HOMAM (Serine/arginine-rich splicing factor 2-like n=15 Tax=Decapoda TaxID=6683 RepID=A0A8J5KC64_HOMAM) HSP 1 Score: 125 bits (314), Expect = 4.600e-33 Identity = 57/93 (61.29%), Postives = 75/93 (80.65%), Query Frame = 1
Query: 49 GNGPPNIEGMVTLKVDNVPYNSSIEDLRRTFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRLDGEFFAGRELRIQYAKRRRPE 327
G GPP+I+GM +LKVDN+ Y ++ EDLRR+FEKYGE+GDVY+PRD + E RGFAFVR+ D+RDA+DA++ +DG GRELR+Q A+ RPE
Sbjct: 4 GRGPPDIKGMTSLKVDNLTYRTTPEDLRRSFEKYGEIGDVYIPRDRFSRESRGFAFVRYYDRRDAEDAMEAMDGRRLDGRELRVQMARYGRPE 96
BLAST of mRNA_M-pyrifera_M_contig7638.18009.1 vs. uniprot
Match: T1G9I7_HELRO (RRM domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G9I7_HELRO) HSP 1 Score: 127 bits (318), Expect = 4.960e-33 Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 1
Query: 46 RGNGPPNIEGMVTLKVDNVPYNSSIEDLRRTFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRLDGEFFAGRELRIQYAKRRRPEFSAGGGG 348
R NGPP+ E + +LKVDN+ + +++E LR+ FEKYGE+GDVY+PRD T E RGF FVRF D+RDA+DAID +DG GRELR+Q AK RP GG G
Sbjct: 4 RYNGPPDTESLFSLKVDNLTFRTTVESLRKAFEKYGEIGDVYIPRDRYTQESRGFGFVRFYDERDAEDAIDGMDGRIMDGRELRVQLAKHPRPPNRYGGSG 104
BLAST of mRNA_M-pyrifera_M_contig7638.18009.1 vs. uniprot
Match: UPI000C254D37 (serine/arginine-rich splicing factor 2-like n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C254D37) HSP 1 Score: 127 bits (318), Expect = 5.900e-33 Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 1
Query: 49 GNGPPNIEGMVTLKVDNVPYNSSIEDLRRTFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRLDGEFFAGRELRIQYAKRRRP 324
G PP IEGM++LKVDN+ Y +S+EDLRR FE+ GE+GD+Y+PRD T E RGFAFVRF D+RDA+DA+D +DG GRELR+Q A+ RP
Sbjct: 5 GRAPPRIEGMISLKVDNLTYRTSVEDLRRAFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 96
BLAST of mRNA_M-pyrifera_M_contig7638.18009.1 vs. uniprot
Match: V3ZXL2_LOTGI (RRM domain-containing protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZXL2_LOTGI) HSP 1 Score: 126 bits (317), Expect = 6.600e-33 Identity = 56/93 (60.22%), Postives = 74/93 (79.57%), Query Frame = 1
Query: 46 RGNGPPNIEGMVTLKVDNVPYNSSIEDLRRTFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRLDGEFFAGRELRIQYAKRRRP 324
RGNGPP+ +GMV+LKVDN+ Y + +DL+R FEKYG++GD+Y+PRD T E RGFAFVRF D+RDA+DA+D +DG GR+LR+Q A+ RP
Sbjct: 2 RGNGPPSTDGMVSLKVDNLTYRTRPDDLKRAFEKYGDVGDIYIPRDRITKESRGFAFVRFFDKRDAEDAMDSMDGAMMDGRDLRVQMARYGRP 94
BLAST of mRNA_M-pyrifera_M_contig7638.18009.1 vs. uniprot
Match: R7U1V7_CAPTE (Serine/arginine-rich splicing factor 2 n=1 Tax=Capitella teleta TaxID=283909 RepID=R7U1V7_CAPTE) HSP 1 Score: 126 bits (317), Expect = 7.630e-33 Identity = 58/89 (65.17%), Postives = 71/89 (79.78%), Query Frame = 1
Query: 58 PPNIEGMVTLKVDNVPYNSSIEDLRRTFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRLDGEFFAGRELRIQYAKRRRP 324
PPNIEGM +LKVDN+ Y ++ EDLRR FEKYG++GDVY+PRD + E RGFAFVRF D+RDADDA++ +DG GRELR+Q AK RP
Sbjct: 7 PPNIEGMASLKVDNLTYRTTTEDLRRAFEKYGDVGDVYIPRDRFSHESRGFAFVRFFDKRDADDAMESMDGAVMDGRELRVQSAKYGRP 95
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 227.3 |
Seed ortholog evalue | 8.4e-57 |
Seed eggNOG ortholog | 2880.D7FM62 |
KEGG ko | ko:K12891 |
KEGG Pathway | ko03040,ko05168,map03040,map05168 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0031974,GO:0031981,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 |
EggNOG free text desc. | regulation of RNA splicing |
EggNOG OGs | KOG4207@1,KOG4207@2759 |
Ec32 ortholog description | SR RNA splicing protein |
Ec32 ortholog | Ec-16_004930.1 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko03041 |
Exons | 5 |
Model size | 772 |
Cds size | 771 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816663.2120976-CDS-M-pyrifera_M_contig7638:1191..1396 | 1622816663.2120976-CDS-M-pyrifera_M_contig7638:1191..1396 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7638 1192..1396 - |
1692278105.7325528-CDS-M-pyrifera_M_contig7638:1191..1396 | 1692278105.7325528-CDS-M-pyrifera_M_contig7638:1191..1396 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7638 1192..1396 - |
1622816663.2245936-CDS-M-pyrifera_M_contig7638:2494..2757 | 1622816663.2245936-CDS-M-pyrifera_M_contig7638:2494..2757 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7638 2495..2757 - |
1692278105.7476466-CDS-M-pyrifera_M_contig7638:2494..2757 | 1692278105.7476466-CDS-M-pyrifera_M_contig7638:2494..2757 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7638 2495..2757 - |
1622816663.2391353-CDS-M-pyrifera_M_contig7638:5696..5853 | 1622816663.2391353-CDS-M-pyrifera_M_contig7638:5696..5853 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7638 5697..5853 - |
1692278105.7559922-CDS-M-pyrifera_M_contig7638:5696..5853 | 1692278105.7559922-CDS-M-pyrifera_M_contig7638:5696..5853 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7638 5697..5853 - |
1622816663.2515402-CDS-M-pyrifera_M_contig7638:9084..9180 | 1622816663.2515402-CDS-M-pyrifera_M_contig7638:9084..9180 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7638 9085..9180 - |
1692278105.764479-CDS-M-pyrifera_M_contig7638:9084..9180 | 1692278105.764479-CDS-M-pyrifera_M_contig7638:9084..9180 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7638 9085..9180 - |
1622816663.2648456-CDS-M-pyrifera_M_contig7638:11710..11760 | 1622816663.2648456-CDS-M-pyrifera_M_contig7638:11710..11760 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7638 11711..11760 - |
1692278105.772717-CDS-M-pyrifera_M_contig7638:11710..11760 | 1692278105.772717-CDS-M-pyrifera_M_contig7638:11710..11760 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7638 11711..11760 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7638.18009.1 >prot_M-pyrifera_M_contig7638.18009.1 ID=prot_M-pyrifera_M_contig7638.18009.1|Name=mRNA_M-pyrifera_M_contig7638.18009.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=257bp
MSGRRDGTFFGDPGMRGNGPPNIEGMVTLKVDNVPYNSSIEDLRRTFEKY GELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRLDGEFFAGRELRI QYAKRRRPEFSAGGGGGGGGGGGYGGGHGGGYGGGYGGGGGGGRYGGRDD RRDDRRDDRRDDRRDDRRDDNHRRRRSRSRSRSRGRRSRSRSPPPRRRSR SHSPVARRGHRSKSRSPSPRRDRKRRDSSAEDGGGGGKRVKETPTRSRRD SSIDGGS back to topmRNA from alignment at M-pyrifera_M_contig7638:1192..11760- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig7638.18009.1 ID=mRNA_M-pyrifera_M_contig7638.18009.1|Name=mRNA_M-pyrifera_M_contig7638.18009.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10569bp|location=Sequence derived from alignment at M-pyrifera_M_contig7638:1192..11760- (Macrocystis pyrifera P11B4 male) ATGAGTGGTCGCCGAGACGGCACGTTCTTCGGGGATCCCGGCATGAGAGG
GTAAGCACGTAAAACCCGCTTTGGACTGCACTCCCTTTGTGGGGCCCAAA
CACTTGAAGTTAGAATAGGATTTAGGCTCCTGGACAGTGCAGCACCAAGA
GGGTTATTAAATATAAACCCTTTGACGTACTCGTAGATCTGCATCCGCGT
GTTTTGGGGACAATTACCAGCTTGCACCTGCGAAGAGTAGGATAGTTTTT
TTGCGGTACGTGCTGACCGCCATGGCCTCTTTGGAAGCTCACGAACGTTC
TTCAGACTTGAGTTTTTGTTTTCGGGGGAATATGGACGCATAGCGTACAG
TACACCGCATTTTTTTTACCTCAGGTGGCCCCTACGCGAGGGGTGGCCTC
CGGCGGTCGGTCCTCGGAGCCCCCCCCCGCGGGCCCCCTGCGAGGGGCTA
CGCGCCTACGGTGCGCAAACAGGCGTCGAAGCCCTGATTTATGCCCTGCT
GTAGCGCCTCTAGACTAGAAGTACGCGGATGTTTTTGGGACGAAATTGCT
TGTAACATGTGTGGGCTAATTTTAGCAGTCCTTTGGGACGTGAGAGGGGG
AAAATATCGAACAATCGTGACTGATTGCGGCGGCCTCTGTCGGCCATCCG
AAGCAGCTCCACCTGCTAACTGGGGTACGGGGTGCAATGTAGGGAGATCG
GAGGTATCTGGTACCTGGTACACGGCAGGCGAGACTGTTATTACGGGGGA
CCATAGTAAATAGGACCAAATATTGTTATTACGGGGGCCCATAGTTAACA
GGACGTATGATGTATATAAAACCTATATATTTGCCAAGTTTTACTAACAA
AATTTGGTCCCGTTAACTATGGACCCCCGTAATAGTAAAAATAGGTAAAT
TTATAGGTTTTTGTCTGTACCGTATGGCCCCCCGTAGTAAGACCGCACCT
GTCGTTTTTGTTGGTTGCTATTACATAGTCGTTTTCTGTCGCTGTACTAT
TACGGGGGTCCATGGTTAACAGGACCTATGGTGTACATAAAAACCTTTAT
ATTTCTCAAAGGGTTAAGATTCCTCTCCATTTTTGTATGACGGTTTAAAC
GTCACCACAGCAGAGTATTGCCGTTCCGCACCAAAACACAGTATGATAGT
AATACGGGGGTCCATAGTTAACAGGACCTATGGCATACATAAAAACCTAT
ATATTTAGGTATTTTTACTAACAATATTTGGTCCTGTTTACTATGGTCCC
CCGTAATAGTAGATTTTCACTACATATAATACCGTTGTGGCGTGTTTAGT
CTATTGATAGTAGTTGACCGCAGCAGCAGCAGCACTATCGAAAGTTCCCT
GTGCGTGTTCAGGTCACTATCGTTGATATTGCTTGAGCTGCAGAGAGCTG
GAGAGCATGGCAACAGGTCATGCCTCGGATTAGATCGTTCAAGGGTAGCC
GTACTCGGCACTCGTCTCGCGTCTCGTTTGTCACGCCCTTCCACCTGGTA
TGGAGTATGGACCTTGCTGTGTATTACATCGAGACGGCAATTGGTCACAC
CAGCCGTGTTCCTGAAACGTTTTTTCGCAAACGAGGAGGTTTACAACAGT
GTATGAATATGTCGGGCGGCATGATCGAGGCAGGCACACCTGCCATACTC
AGCACGAATATTTTAGTCGTGCTGACGTTCAGGGTTGTCGCTAATGTTGG
AATCACTACTTGTACAAGCACGCGCAGCAACCCATATGATACGATAGCGC
ATGATGCAACGTAGGCCTTCGGCACAGGTCGGCTGGACCGAGCTCGAGCT
ATAGGCATTAGTTAGGTTCAGATTGATGTGCACCCTATGTGTTACGGACA
CGGCGACCAAACAAACGATACGTCAGCGCACAGCAGTGTTGCTGCTGCTG
TAGTACGAGTAGGGTCACGCTGCCCGCTTGATATGGTCGACTCCTTGCCT
TGTTGTTCGGAAACTGCACCAAGTGTGTATGCAACCCCCCAGTCGAGCAG
CAGTGGCCGATGCTGTACGTGCTCGTCTTTTTTTTCGTTGGTTCGGTTTC
CTCTTCGAACTTGAGTCCTATATATGAAGGTTACAGTAGCTTGTCCCGCC
CTTTTACTATTACGGGGGTCCATAGTTAACGGGACCAAATTTTGTTAGTA
AAAATAGGCAAATATATAGGTTTTTATGTACACCATAGGTCCTGTTAACT
ATGGACCCCCGTAAATAGAGTAGTTTCACTGCTGTGCAGAAATCTCAACC
TGACTCTAGTTTCAAGTGGTTTGCCCCGACAATGGGAGTGCAGTCCTTAA
GGCCTGAACGGGTTACATCATAATCTAAACCTGACTCTTGTTTCAAGTGG
TTTGCCCCCACAACGAGAGTGCCGTCCTTAAGGCCTGAACAGGTTACATT
GATCTAAACTTGACTCTGCTTCGAAGTGGTTTGCCCCCACATCGGGAGTG
CGGTCCTTAAGGCCTCAACCGGTTACAGTAAGTCCCCCAAGAGGATTAAC
CTATCCCGCTTCTGATCGATGCCGCCGCCGATGCCATGCCACGCCTTGCC
TCTCCATGCCACGCCGTCATACGGCCACAGAAATGGACCTCCCAATATCG
AGGGCATGGTGACGCTCAAGGTGGACAACGTGCCTTACAACTCCAGCATC
GAGGACCTTCGCCGAACCTTCGAAAAGTGAGTATTTTTTTTTTTGGAAGT
GCTGTAGATCGACACCCGCCTACCACAGCAGAGTATTACCTTCTTTTTTT
TTAATTAGCTACCACCCTGGAAATTCAAGTGCCGTTTGGATAGTGGTATT
AGTACCCAAATAATCCGTATATTTCCGGACAGAGTGGTGTCATATTGTGT
TGGACCACTGTCGAAGGTACGTCATACTGTTGTTTGCTGCTGCTGCTGCA
ACATAGCCCGCTCTTTCTCGATGGACGTGGGATGATGCGATGCAGCAGGC
AGCAGTGGTTCGAGTAAAGGCTGGTCGGTCTGTCTGCGGCCCGTTGTGGT
ACGAAGAGCCTCATCGGACGTACCCGTGGGTAGATGTAGGTGGTCGAATG
CTGACTGCTGACGCCGGAACGAGTTGCGTTTCTGCACACTGGCACTCGCA
TTTACCACTTGGGACGGGAACATGAAAACCAAGCGGTCCTTCGTTTTCGC
CCAGGATGGAAATATATTATGAGCATTGCAAGCAGTAGACTAGGGCAGTA
CAAGCTGTTCCGGTAACCCCGCAGTATGTATGTAGGCTGTGAAGACCTCG
TTTTCTGCTCCTGCCGGAAACTTAATGGATAGTTTGGGGATACATGTTAC
AACTGCTGTTGATATCCAAACGGTCCTTATATGTACGGACAGACTGGTGT
ACGATACTTGCCATTTACAGGTGATACCCGCCGCCTCGGCGGCGGACCAC
CCGTAGGTAGCACTGCGAGTCGCGTGTATAGACAAGTAATAGTATAAGGT
ATCGAGGAGGTCAGTATATATGGTACCACTCTCCTGAAATGTAAGAAACG
CTTAGATATTCATACACGTAGTATTCATACCGGTATGAATACCCAACCAG
TGCCTACGTTTTCGGGCACAGCGGTGAGAGGAGAGCAAAGGCTTGCGCCC
ACGGACAGGTCCTGCGGCCGCGGTGTCCTCGTGTTGTCCAAAAAAAAGCC
AGAGGGAAAACGCGCGTGTAAATAATGTGTAGCAGTAGCAGCAGCAGCAG
CAGCAGCAGTTGGGCAAATGCGCGCTAGGATCGTTCGTGGTGAGGCCTCC
AGAAATGCAGAAGCTTTTCGGGCGGGATTCGTTACTTGCAAATCGAGTTG
GTATGTTTCGCAGGGGTCAAAAGTGTTCCAACCCCTTTAGCGCCAAGTTT
CGGGGACAAAGTATGTGAAAATTGAGTTGAGCATTGGTTTTGGAGTGATA
AGGACTGTCTAAGCTTTGGAAAAACTGTTTGCAGAAGGCGTTCCCCCCGC
CCCCCCCCCCCCGTGCTCCGTCTCGAAAGGGATGCGTGGCCAGTGGCCAA
ATGACTACTGTAAGGCAAACAACAAATGAGTATCCCCCCCCAAGCCCCAC
GGCTTCGATCGACGAACGAATTTGTCGCAGTCCCTCAGCCTCGCCCGCTC
GCTCCGCATGTACTGTACTGCTGTACTTTACTGCTCTATCACGTCGATAT
ATAGGAGAGACCTGCCATGATGTCCTGTTCTATCCTGTCCTGTCCTGCTA
CGAGTACCGGCAGTCCTGCCACCACGTCCGGGCCGAAAGTCGATCGGTGC
GGGTGAACGAGCTCCAAGCGTATTGTGTTGGTGTGGCTTGTATATGGGCG
AAGCCGACGTGAGAAGGGTGGCCGGTTGACGTGTTTTTTTGTACGAGGGA
AGGCAGTGCGAGAGAGGGACGGAGGGAGGGCGGGAGGTGCAGCCCGGAAG
CGATTTAAGACGACGGCGTTCGGCGAGCGAGCAGGATAAGGACGGCGAGC
ATGCTGAGAGAGCAGGCAGACAAGCAGACAGAGAGAGCGTTGGCGGCAGA
CGGACCCTGATCCTGAGCTGACGAGCAAACAGACAGACAGACAGACAGAC
AGACAGTCAGAGAGAGAGAGAGAAAGACAGACCGGCCGGCCGGCTCGAGC
GGTTCGGATGCGGATTGGGTACGGGTGCGTCGCGTTCCGAGTACAGACAC
GCGTCGTCGCTGTGAAGGGGTGGTGATCGTGATGGTGGTTTCGTGAGCGG
TGAAGGGTCGTGATGACTGCGTGCCTCCCTGCAGTGGTCTGTGTCTCGGT
CGAGGTAAAGTGCGGAGGGAGGCTTATGATGATAAAGAAGTAAAGCTTGC
GTGTGTCATAGTGTACGTATATATACTGCCTGGTTAGCCCGTTTAGGTCT
GCACTCCCGTTCCGTGCACAACTTACTTGGAATCAGAGTTAAATAGGTGT
GCCTGGGCACTGCAGCACTGAAAGGGTCAATCTGATGCGCATGTTCATGT
TGCACGCATTGCCCCTCGAATGGCGTGCGTTTCGCGTGCTGTTTTTTCTT
TCCCCTTCGAGTGTGTGTCACCTTTATTTTTTTGGCGAAAGCCAACAATC
GGTACACCTACGCCTTTTGAGCCTGTCATAGGTGCACTACTTATTTGCAA
AAGGTACTATCGGGCGCTGGTGGCCAATCAGAGAAGAAGGGAGCCAGGAA
GCCTTGTCCCGAGCGCAGTATATTGTGTGCCTGTAAATGGCTCGAAAGGC
ACAGGTGCACCCATACTTGGCTTTTTGCCCGTAATTTTTTTTGTGTATTT
AATGCATAAATCGGGATGAGAGAACCACTACTATTACGGAGGACTATAGT
AAATACGACCAAATATTGTTAGTAAAAATAGGTAAATATATAGTTTTTTT
TATGTATACCATAGGTCTTATTAACTATGGTCCCCCGTAATAAGACAATA
CGCTTATCAATTAATTGGTTGCTCGACGACCTGTGTACGTAAGACATGGC
GGTAACTTGCCCATTGGGTCCATTTGGAAGCACCACCGTGACACTCGAGG
CCGTAAATACCTACTTTTTCTTCAACTATTGAGACAGCGCCCCCCCCCCC
CTGTAGTTTGCAAGTACATATCCCTCTCTCCTCCATAAGGTATACATGGA
ACATATTTGTTGGTGGTCGTTTTTAGTGCAAGTTCATGTCCCTCTCTCCT
GCATATTTTATACCAGGTACCTGGGACTTACTCATGGCTGGTTGTTCGTT
TTTGGTCTTCATGGCGGCGAGGCGTGTTGTTGGTCCTCGTGCCGTGTGCC
ATTGACCCGGCGGTGCCTGCAGCAGCACCGCTTGCACCCTGGCACCATTG
CCGCCGTTAGGTGCTCGCTCTCGCGCGGCCACGCTCCCTGATAACTACAT
CCTATGCCGCAATGGCCACCCGCCCTCTTGTGCTGTCGTTCTTCTCGGCC
GATTCAGGTACGGTGAGCTAGGTGATGTCTACATGCCGAGGGACCTCCGT
ACCGGCGAGCCGAGGGGATTCGCGTTCGTACGGTTCATGGACCAAAGGGA
CGCCGACGACGCCATCGACCGCCTCGACGGAGAGTTCTTCGCCGGCCGTG
AGCTTCGTATCCAGGTATGGTATATGGTGTGCCTTGTTTCCCACCCAAAA
TAGTTTTGATCGCTACTGTGGTCGTTGCTTTTACGCCGTGAGCTTGGTAT
CCAGGTGTGATGCAACGGTGTGCCTTGTTTCCCGCTCAACAAGTAGTTTA
TATCGCTACCGTCACCGCATATGTAGGCCGTGAGTTTCTTATCCTAGAAT
GATGTGCTTTGTTTTCTGATCACTCTGTCGAACCGTTGCACTTAGGCCGT
GAGCCAAAGATCCACATTATTGTTTATCGCGGCGCGCACGACACGCACGA
CACACACCGCACACACCGCACACGCAAGCACAGCAGCACAGCAGCACAGC
AGAAGAGAGAGAGGTAGGTGGTGAGGACCGATGACGGACCGCAGCCTCCG
ACAAGGCAACTAGCCAAAGCAGTACACCACGGACCCGCGACACGCGCGCG
TTGTGGCCCGCTGCTGCTTGTGCTGCTAGACGGGGTTGTAGCTTTGTTTG
TGTTCTTTGCATGTTGTCTGATGTCTAGCGTAGATTTCTGGGGGTGTACT
TCGGGCGAGAAACACAAATCGTCGGAAGTACATGGACAGTTGAGGCACTC
GTATTTAATTTAAGCGGTCAATACATTTCCCGCTAGAGTGTGCGTGGATG
TCACACAGCAGCAGCAACGACAGGTAGATGATGGATTCCGGACCGCAGGT
TCCGATAAACACAACCAACCACAGCAACACCGCAAATGGGTGTGTGGCAA
ACGCGCGGCGTATGGGCTGCAGCGTTGTAACGTTATGCTCTGTGCATGTT
GTCTGCTGTCTACCTGGTATGGTTTATGTCTGGGCTGTGTGCTCATGAGG
CAAAACATAGAGAACAAAGTCTTAGGTACGTACTTCCAAAATATGGTCCC
TCGTAGGTAGTCGTCTTATCCACTCCCGCCGCAACAAAAACTTTGAGCGC
GCGCCACGCGCTCCAGAGTGCACGGATCGCGCCCGGCCCGGATCTCGACC
AATGTGTCCGGTCGGGCTTCCCGTGTCGACTACCTAGCGTTTTGCCCAAA
CTTGCTCGTACGAAGAGATGTGTTCGAAAAAGTACAACATTTCCAAAAAA
CATAACTATGCATATGCTTTGTTTCCGGGCGAGGTCGAACTATGGTAGAA
ATTATTTGAACTTGTCTGGTCGTTAAGTCCGCGTGATGATGGAAGGGTTT
TTTTTTCCGTCCCAGCCTCCAGCTTTTAAGCTTTGTTTCCCACCCAAAAA
TAGTTTTGATTACTATTACGGGGGTCCATAGTTAATAGCACCTATGGTAT
GCATAAAAGCCTACATGTTTACCTATTTTTACTAACAATATTTGGTCCCG
TTAACTATGGACCCCCGTATTAACTGCTGCTGTCGTCGTCGCGGTTGCAC
TTGCTCTAATTTATGGTCTGATTTTCATGAACCTGACCCAAGAGATAGTA
TGCCCGCTTCCTACTGTAGTGACACCCACCTTTGGTAGTAGGTGTATGTC
GATGGGTTCATTCGTTGGTTTGACGTTGCCGTGGCGCTGGCTGGCCTTTC
GGTGCTCGAGAGCGAGAAAGCCCCGCACCGTCCGTCCGTCTGCCTGCCTG
CCTGCCTGCCTGCCGCATGCTCGTTAATGCCAGGTACGTTGTATTACTAT
GAGCGAATGCGAGATTCTAATTTGGCGACGCCAAAATAGTAGGGTCTGGT
TTCAGACGGCCTGAACCTCCTCGCTGTAGCGGGTCTCAAAATATGTTACG
GCGTTTACCAACAACTTTTTTTTCTTTTTTTTTCTTTTTTTGTCTCCGGG
TTGTCCAGAAAAGTCGCCCGCAGACCATCAGCAGCAGTTGATCGGTATCT
CATCAGTGTACCAAGTGTCTCGGGTGGGAACGGATCGCTGGGGTACAAGC
GCTGTGCTCTGCCGGTATCTCGCGTGCTTCCTGTTGTCCGAAGCCGTTTA
CAACGTCCGCGGACCAACAGCAGCAGTTGGTCGTTGTCGCATCAGCGCGG
ACGCGCAGCCTGAGCGCAGTGGGCCAACCCGCACGGCACCACGAGGCAGA
ACAGCCGCCACCGAGGCCGTGCGTGCGCACTCAATGTCGCGGATGGGAAC
GGCTCGCTGAGCTAAACTTGCTGTGCTTGGCATGTCTCTTGTGCGCTTCC
TGTTGGTGCGATGTTTTCTACAGTATAACCTCTACCTTCGAACCAACTCA
AAGGGTACTCAAGACGCACGCTACTTCTGTTGCTGTGCGAGTATGAGCAG
ATGATATTTTCGAAGGTGTCGCGAGTCGAGGACGGTGTAGTTGTACGCCG
AAGCGCAGGGCGATGGGGTATGATCGGCGGCGGGCAGGCCAAGGGGGGCT
GGTGGGGTGGGGTGTGATCGGCGCACTCATATGCTGTAGTTGCATGTTCA
GCTTTTCTTACCCTGAACATGTGATACCTATGTTGATTTTTTTTTTTTTT
TCATCAACACACCCAACATTAGTTGTCGACAGTTACAATTCCCTGGTGCC
CGAGTTCATAGCGACAGCCATGCTTTCTTTTTATTGGTAGAATACACGTA
TTCATACCGTATTGTATACCCTGGTAAGACGCAAGGTAACTCCCTCTCGA
TCGAATTTCCAAGTTAATTTTCTTGACATCAGGGAGAGCGCAAATACCAA
GCGATGTGTCTATGGATGGGTTTCGACGAGATGTTTCCAAAGCCACTCAC
TGCTGTTACTATTTCGCTGTGTGCGCCCCCCTTGCTTTGGAGATGATCGG
CTCGAACGTTCGTCCCAGGGGGTGTGCTAGCTAGCCTATCACCCGTGTGA
TAGTGTTGTACGGTATTCCCATCGCGGTAAAAAATATTCGGAAGCTAAGC
TGAATGCGTGACTGAGCCAGTCTCAACCTCTTGCCTTGTCTGATTCCAAA
CGCTGTGTGCACGTTCGCGCGACACTTCCGCGACCGCTACGCCATTCGAA
CAGTACGCCAAGCGCAGGAGGCCCGAATTCAGCGCGGGCGGGGGTGGCGG
CGGCGGTGGTGGTGGTGGGTACGGAGGTGGGCACGGGGGCGGGTATGGAG
GCGGGTATGGGGGTGGCGGCGGCGGAGGGCGCTACGGTGGACGCGATGAC
AGACGCGATGACAGGCGCGACGACAGACGTGATGACAGGCGTGATGATAG
GCGTGATGACAACCATCGCCGTCGCCGCAGCCGCAGCCGCAGCCGCTCCC
GAGGACGCCGCTCCAGGTAAACAATCTCGCCTTCAGGCGTGTGCTTAGTA
GTAGGGTAATATACCGTATACTTTTGAGATACTCGCGGGTACCAAACCTG
GTTGTCTTGGTCATACCTGGTATTTGAGTAGATACCCGGGTACCAAACTT
GGTTCTTTTTGTGGTACTATACTCGGATAGATACTCGGGTACCCAACGTG
GTCGTTTTGTTAATACCTGGTACTCGTTAGGTACCCGGGTACCAAACTTG
GTTGTTTTGGTCGAACTCGGGTAGGTACCCGGGCTCCAAACCTGGTTGTT
TTGGTCATACTCGAGTAGGTACCCGGGTACCCCCAGATCATATACCTTAC
TATTAATAGACATACCTCTTGCAAAGTTGATTGAAATGATGCTTGAGCAT
GGCGGCGTAAATGCTGCCCATGTTGGTGGCGCCGGTGGCACGTCAAGTTT
AGGCCAGAGTCCCTCGCCACGCAATTGGGCCCAAACGACACTATATTTTA
GAATATTTGTGCTTGGTGTTCGTACCAAACGGTATTATCACTGTGTCTGT
TCTTATTTTTTGTGGATATTACCGTTTCTGCAGAAGATTCCGAGGTTTGG
TCGCAAATCGGAGAAGCTCGCTTGTCAGTATGTCCTGACATTTGCCACGA
AGGTGTCTTTCGTTACGGGGGACCATAGTGAATAGAACCAAATATTGTTC
GTAAAAAATAGGCAAATATGTAGGCTTTTGTGTTTACCGCAGGTCCTATT
TACTATGGCCCCCCGTAATAGTAGGCACTGGCGTGCGCCGCTATTAAAAG
TTGGGAACTGGGGGTTGTACCGCTACATAGTGCCTAGTCAGTTGCTTGTA
TAGCTGTAATCGTTCAGGGCTGCTGTAGTCCTCGATCTGATAGACCCAGG
TATTGTTCGTATCAGCAGTAGTGGTCATGCCATCCCGTTGTCAAACACGA
CGACCCAACTTTCCCCCCCCCTTCTTATCTTACACTTACCATCGTTGATG
TTCTTCAACGCAACGACCCTCTCCCACCCCTACCCCTTCCCGCCCCCGCG
ACTCGCGCACCGCGCCATGGATCATCGACGTTTTCCCTCCTGCACCCGCC
CGACATAAGAACAGAAGCCGCTCCCCGCCTCCGCGCCGTCGCTCGCGCTC
CCACTCTCCGGTCGCCCGCCGCGGGCACCGCTCCAAAAGCCGCAGCCCGT
CACCTCGGCGGGACCGCAAGCGCCGTGACTCCAGTGCAGAAGACGGCGGC
GGCGGCGGCAAGAGGGTCAAGGAGACCCCCACCCGCTCGCGCCGCGATTC
CAGCATAGACGGTGGCAGC back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig7638:1192..11760- >mRNA_M-pyrifera_M_contig7638.18009.1 ID=mRNA_M-pyrifera_M_contig7638.18009.1|Name=mRNA_M-pyrifera_M_contig7638.18009.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1542bp|location=Sequence derived from alignment at M-pyrifera_M_contig7638:1192..11760- (Macrocystis pyrifera P11B4 male) ATGAGTGGTCGCCGAGACGGCACGTTCTTCGGGGATCCCGGCATGAGAGG ATGAGTGGTCGCCGAGACGGCACGTTCTTCGGGGATCCCGGCATGAGAGG AAATGGACCTCCCAATATCGAGGGCATGGTGACGCTCAAGGTGGACAACG TGCCTTACAACTCCAGCATCGAGGACCTTCGCCGAACCTTCGAAAAAAAT GGACCTCCCAATATCGAGGGCATGGTGACGCTCAAGGTGGACAACGTGCC TTACAACTCCAGCATCGAGGACCTTCGCCGAACCTTCGAAAAGTACGGTG AGCTAGGTGATGTCTACATGCCGAGGGACCTCCGTACCGGCGAGCCGAGG GGATTCGCGTTCGTACGGTTCATGGACCAAAGGGACGCCGACGACGCCAT CGACCGCCTCGACGGAGAGTTCTTCGCCGGCCGTGAGCTTCGTATCCAGG TACGGTGAGCTAGGTGATGTCTACATGCCGAGGGACCTCCGTACCGGCGA GCCGAGGGGATTCGCGTTCGTACGGTTCATGGACCAAAGGGACGCCGACG ACGCCATCGACCGCCTCGACGGAGAGTTCTTCGCCGGCCGTGAGCTTCGT ATCCAGTACGCCAAGCGCAGGAGGCCCGAATTCAGCGCGGGCGGGGGTGG CGGCGGCGGTGGTGGTGGTGGGTACGGAGGTGGGCACGGGGGCGGGTATG GAGGCGGGTATGGGGGTGGCGGCGGCGGAGGGCGCTACGGTGGACGCGAT GACAGACGCGATGACAGGCGCGACGACAGACGTGATGACAGGCGTGATGA TAGGCGTGATGACAACCATCGCCGTCGCCGCAGCCGCAGCCGCAGCCGCT CCCGAGGACGCCGCTCCAGTACGCCAAGCGCAGGAGGCCCGAATTCAGCG CGGGCGGGGGTGGCGGCGGCGGTGGTGGTGGTGGGTACGGAGGTGGGCAC GGGGGCGGGTATGGAGGCGGGTATGGGGGTGGCGGCGGCGGAGGGCGCTA CGGTGGACGCGATGACAGACGCGATGACAGGCGCGACGACAGACGTGATG ACAGGCGTGATGATAGGCGTGATGACAACCATCGCCGTCGCCGCAGCCGC AGCCGCAGCCGCTCCCGAGGACGCCGCTCCAGAAGCCGCTCCCCGCCTCC GCGCCGTCGCTCGCGCTCCCACTCTCCGGTCGCCCGCCGCGGGCACCGCT CCAAAAGCCGCAGCCCGTCACCTCGGCGGGACCGCAAGCGCCGTGACTCC AGTGCAGAAGACGGCGGCGGCGGCGGCAAGAGGGTCAAGGAGACCCCCAC CCGCTCGCGCCGCGATTCCAGCATAGACGGTGGCAGCAAGCCGCTCCCCG CCTCCGCGCCGTCGCTCGCGCTCCCACTCTCCGGTCGCCCGCCGCGGGCA CCGCTCCAAAAGCCGCAGCCCGTCACCTCGGCGGGACCGCAAGCGCCGTG ACTCCAGTGCAGAAGACGGCGGCGGCGGCGGCAAGAGGGTCAAGGAGACC CCCACCCGCTCGCGCCGCGATTCCAGCATAGACGGTGGCAGC back to top
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