mRNA_M-pyrifera_M_contig76012.17929.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: A0A518CCC1_9BACT (Glycosyl transferase family 64 domain protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518CCC1_9BACT) HSP 1 Score: 101 bits (251), Expect = 3.850e-23 Identity = 62/173 (35.84%), Postives = 94/173 (54.34%), Query Frame = 1 Query: 13 ILMSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLQTANDLGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLSIHGIWGRWPTRSNPYRPGEIPPDFTRAPIVLTRAFVVNKAHMGTFWVAAPHLDFLAASATPRWNGEDILFS 531 +++++KRP V +I+ + +V E IV+NNN T A V+ A D+G++TRF+ LAT++ +L QDDD+ L AE++ L+ +H IHG++GR P Y I D T +PIVLTR V ++ + F+ AP + P NGEDI+FS Sbjct: 7 VILNWKRPTNVARILSGWQASGIVTEAIVWNNNPAATFRHQWAN------VVNAAQDMGLYTRFATACLATNDCVLIQDDDLELPAESLRTLVDAWHDDFGIIHGVFGRAPKPDGSYA-RNIGGD-TESPIVLTRVLVAHRRYASQFFQVAPAFANVQQGGKPAGNGEDIIFS 171
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: A0A5J4YB26_9CHLO (Glyco_transf_64 domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YB26_9CHLO) HSP 1 Score: 99.0 bits (245), Expect = 5.620e-21 Identity = 64/178 (35.96%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 4 LSVILMSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLQTANDLGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLSIHGIWGRWPTRSNP-YRPGEIPPDFTRAPIVLTRAFVVNKAHMGTFWVAAPHLDFLAASATPRWNGEDILFSL 534 ++V+L++FKR + KIV + + V E+IV +NN T P + I L ++ +DLGV RF A LA + IL DDD++++ + LL+ + HP SI G WGR SNP Y + P I LT+A +++ FW A+ + +A A WNGEDI SL Sbjct: 235 VTVVLLNFKRSDNIRKIVDNMVNYNSVAEIIVVSNNPNSTFTYPNKKVIV-LDMMAYEDDLGVAVRFKACLLAMNRHILIADDDLMVTEAGLSNLLTARYEHPWSIVGFWGRDYNHSNPDYAYVDTEPG--HHDIALTKALLLDTCACRAFWEASHLMQDIAHEAAVTWNGEDIFMSL 409
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: A0A7R9V959_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V959_9CHLO) HSP 1 Score: 82.4 bits (202), Expect = 6.690e-16 Identity = 63/187 (33.69%), Postives = 98/187 (52.41%), Query Frame = 1 Query: 1 QLSVILMSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLQ--TAN-DLGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLSIHGIWGR-----WPTRSNPYRPGEIPPDFTRAPIVLTRAFVVNKAHMGTFWVAAPHL-DFLAASATPRWNGEDILFSL 534 ++SV++++++RP V +I++ Y D V E+IV+ + D T S P++ ++ +AN + G+ TRF A LA E +L QDDD L + + ++ P + G +GR W R Y +PP R IVLT + + A FW AAP + +F+ + P WNGEDI FSL Sbjct: 8 RVSVVMLNWRRPGNVRRILRKYVEYDAVEEIIVW---MCHPD-TRFNFSHPRVRIVDKPSANSEFGLATRFRACLLAKSEWVLVQDDDHYLQPQGLAAFMAAKASSPARLVGAFGRDWRGGW--RDAAYVRRRVPPGPAR--IVLTVLALTDVAACQAFWDAAPAVQEFITQRSRPLWNGEDIFFSL 186
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: A0A7S0WN27_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WN27_9CHLO) HSP 1 Score: 79.7 bits (195), Expect = 2.830e-15 Identity = 58/181 (32.04%), Postives = 95/181 (52.49%), Query Frame = 1 Query: 1 QLSVILMSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLQT--AND-LGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLSIHGIWGRWPTRSNPYRPGEIPPDFTRAPIVLTRAFVVNKAHMGTFWVAAPHLDFLAASATPRWNGEDILFSL 534 + +V++M++KRP V +I+ V E+IV++ N D T + PK+ + AND G++TR+ A++E ++ DDDVL I++LL R+P +H GR P Y + + A +VLT+ V ++ ++ AP ++ +A +ATP WNGEDI SL Sbjct: 20 EATVVIMNWKRPDNVRQILSAMVNYRAVKEIIVWHCN---PD-TVFDYAHPKVRNIDEPEANDKFGLNTRYQGCLRASYEQVITVDDDVLPPEITINQLLLAKQRNPQCLHSTHGRNPQPGCVYNFKQT--NDGPAQVVLTKVMVTDRRFCKAYFEYAPVMEDVARNATPYWNGEDIFMSL 194
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: A0A0S8DZM1_9BACT (Glyco_transf_64 domain-containing protein n=1 Tax=Phycisphaerae bacterium SG8_4 TaxID=1703409 RepID=A0A0S8DZM1_9BACT) HSP 1 Score: 71.2 bits (173), Expect = 6.580e-12 Identity = 51/177 (28.81%), Postives = 90/177 (50.85%), Query Frame = 1 Query: 4 LSVILMSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLQTANDLGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLSIHGIWGRWPTRSNPYRPGEIPPDFTRAPIVLTRAFVVNKAHMGTFWVAAPHLDFLAASATPRWNGEDILFSL 534 +S +L+S++RP +E IV+ ++ E++V+NNN ++ + +V+ ++++ R+ L H I FQDDD+L+S E + K++S + P I+G GR R Y P + + I+L ++ + +K F+ AP + LA P G+DI FSL Sbjct: 3 ISAVLLSWRRPTNIEPIVRTLRKHPLIKEVLVWNNN---PEINLKGDGA---IVINSSHNFFPFVRYCLVPLTKHPLIWFQDDDLLISPEQLDKIVSAYSTAPNRIYGCRGRNIVRGR-YAPAIV---YGECDIILGQSMLFHKK---LFYEVAPEFNALA----PNERGDDIAFSL 162
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: Q2SLD6_HAHCH (Uncharacterized protein n=2 Tax=Hahella chejuensis TaxID=158327 RepID=Q2SLD6_HAHCH) HSP 1 Score: 63.2 bits (152), Expect = 1.180e-8 Identity = 39/112 (34.82%), Postives = 55/112 (49.11%), Query Frame = 1 Query: 4 LSVILMSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLQTANDLGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLSIHGIWGR 339 ++ IL+S+ RP+ V+KI A +G++IV NNN + DL E PKL ++Q RF + L DDD+ LS E I LL P HG+WG+ Sbjct: 25 VTAILLSYLRPENVQKIFGQLAKSKYIGKIIVSNNNP-DIDLCLYIEQHPKLSLIQQVVHYPPWIRFEFAAHDSANYFLSIDDDIFLSLEQIDLLLERLFNGPAVPHGVWGQ 135
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: A0A525KGT8_BRASZ (Uncharacterized protein (Fragment) n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525KGT8_BRASZ) HSP 1 Score: 59.7 bits (143), Expect = 1.540e-8 Identity = 33/108 (30.56%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 4 LSVILMSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLQTANDLGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLSIHG 327 +S IL+S++RP+ + +IV +GE++V+NNN + +LT +P ++ + + G R+ LA ++ I FQDDD+L+S KL + + + I+G Sbjct: 1 MSAILLSWRRPENIARIVAELRTWKRIGEIMVWNNNP-DQNLT-----LPGATIINSGRNFGCLARYGLVALADNDTIWFQDDDLLVSEAQFEKLFASYLKDAGRIYG 102
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: UPI00035E6313 (hypothetical protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00035E6313) HSP 1 Score: 61.6 bits (148), Expect = 3.640e-8 Identity = 50/182 (27.47%), Postives = 79/182 (43.41%), Query Frame = 1 Query: 1 QLSVILMSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLQTANDLGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLSIHGIWGRWPTRSN---PYRPGEIPPDFTRAPIVLTRAFVVNKAHMGTFWVAAPHLDFLAASATPRWNGEDILFSLS 537 +++ IL+S+ RP +++I A + + ++IV NNN + DL + PKL + Q RF E + DDD+ L+ E + L+ +P S HG+WG+ ++N R D VL RA+ K H + HL A + ED+L S S Sbjct: 6 KVTAILLSYLRPDNIQRIFDALAASEHISKVIVSNNNP-DIDLREYLKDHPKLSLRQQIVHYPPWIRFEFAVHDDAEYFISVDDDLFLTTEQVDSLIQSLFNNPSSPHGVWGQRIVKTNIGLQVRDNIFGEDGRVD--VLNRAYACTKEHAINSFTLLKHLGINHARKIGMF--EDVLLSFS 182
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: UPI001C1F0957 (hypothetical protein n=1 Tax=Hahella sp. HN01 TaxID=2847262 RepID=UPI001C1F0957) HSP 1 Score: 59.7 bits (143), Expect = 1.820e-7 Identity = 38/115 (33.04%), Postives = 57/115 (49.57%), Query Frame = 1 Query: 4 LSVILMSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLQTANDLGVHTRFSAGTLATHEAILF---QDDDVLLSAEAIHKLLSEFHRHPLSIHGIWGR 339 ++ IL+S+ RP+ +++I A + ++IV NNN + DL E PKL ++Q RF A HE + DDD+ LS E I LL P+ HG+WG+ Sbjct: 10 VTAILLSYLRPENIQRIFGQLAKSKYIDKIIVSNNNP-DVDLCVYIEQHPKLTLIQQVVHYPPWIRFE---FAAHEPANYFFSVDDDIFLSVEQIDLLLERLFDRPVVPHGVWGQ 120
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: W6TVM1_9SPHI (Uncharacterized protein n=1 Tax=Pedobacter sp. V48 TaxID=509635 RepID=W6TVM1_9SPHI) HSP 1 Score: 52.0 bits (123), Expect = 8.260e-5 Identity = 32/112 (28.57%), Postives = 53/112 (47.32%), Query Frame = 1 Query: 7 SVILMSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAE-SIPKLLVLQTANDLGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLSIHGIWGR 339 + I++S+KRPQ +++I + + V +LI+ NNN E DL + + +++ D G R+ + E DDD+ LS I L+ P HG WG+ Sbjct: 6 TAIVLSYKRPQNIQRICETILSVSQVCKLILSNNNP-EVDLKSYVKIDDNRFVLINQERDSGCIKRYELAYVEHSEYYFCIDDDLFLSKTQIQYLMVNLINDPFRPHGFWGQ 116 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76012.17929.1 >prot_M-pyrifera_M_contig76012.17929.1 ID=prot_M-pyrifera_M_contig76012.17929.1|Name=mRNA_M-pyrifera_M_contig76012.17929.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp MSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLback to top mRNA from alignment at M-pyrifera_M_contig76012:149..694- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76012.17929.1 ID=mRNA_M-pyrifera_M_contig76012.17929.1|Name=mRNA_M-pyrifera_M_contig76012.17929.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig76012:149..694- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76012:149..694- >mRNA_M-pyrifera_M_contig76012.17929.1 ID=mRNA_M-pyrifera_M_contig76012.17929.1|Name=mRNA_M-pyrifera_M_contig76012.17929.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig76012:149..694- (Macrocystis pyrifera P11B4 male)back to top |