mRNA_M-pyrifera_M_contig7578.17874.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7578.17874.1 vs. uniprot
Match: D8LI69_ECTSI (U-box domain containing protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI69_ECTSI) HSP 1 Score: 328 bits (841), Expect = 5.680e-104 Identity = 335/398 (84.17%), Postives = 345/398 (86.68%), Query Frame = 1 Query: 1 QANVRDGQYDATLLHWAVNEGHTPTVEHLLACGADVRLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSRDASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKDADGNTPGSTFHASVPEEARKGIRAAMESGPASDDSVVRAATVSSELLLETLHACRSWGELFENRHFDVLSKECQEHRERLRGVIQGLADQGKAEGLEPCLKAMDLLNSALGLHEDMRSGTKPVPLKPSGGRVGATAGAXXXXXXXXXXXXXXXXXXXXXXGRHECGGGAPPRAGGEGRESVDLQEFLSATGGXXXXXXXXXXXXXXXXXXXXXXXSSG-ASLRLYQLPAVREACGGFDPKRCIGEGGFGKVRKGRGLG 1191 +AN RD QYDATLLHWAVNEGH PTVEHLLACGADVRL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DAS R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADGN PGSTFH SVPEEA + IR+AM+ GPAS D VVRAATVSSELLLETL ACRSWGELFENRHFDVLSKECQEHRERLRGVIQGLADQGKAEGLEPCLKAMDLLNSALGLHEDMRSGTKPVPL G XXXXXXXXXXXXXXXXXXXXX G + GG PPRAGGE R S +L++FLS G XXXXXXXXXXXXXXXXXXXXXXX ASLRLYQLPAVREACGGFD KRCIGEGGFGKV +G +G Sbjct: 30 KANARDSQYDATLLHWAVNEGHMPTVEHLLACGADVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASNRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGNIPGSTFHHSVPEEAIRDIRSAMQRGPASGDGVVRAATVSSELLLETLRACRSWGELFENRHFDVLSKECQEHRERLRGVIQGLADQGKAEGLEPCLKAMDLLNSALGLHEDMRSGTKPVPL--GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTGDSGG--PPRAGGEHRGSEELRDFLSTEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXASLRLYQLPAVREACGGFDQKRCIGEGGFGKVYRGSMMG 423
BLAST of mRNA_M-pyrifera_M_contig7578.17874.1 vs. uniprot
Match: A0A6H5KWH5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWH5_9PHAE) HSP 1 Score: 292 bits (748), Expect = 4.230e-85 Identity = 295/397 (74.31%), Postives = 302/397 (76.07%), Query Frame = 1 Query: 1 QANVRDGQYDATLLHWAVNEGHTPTVEHLLACGADVRLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSRDASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKDADGNTPGSTFHASVPEEARKGIRAAMESGPASDDSVVRAATVSSELLLETLHACRSWGELFENRHFDVLSKECQEHRERLRGVIQGLADQGKAEGLEPCLKAMDLLNSALGLHEDMRSGTKPVPLKPSGGRVGATAGAXXXXXXXXXXXXXXXXXXXXXXGRHECGGGAPPRAGGEGRESVDLQEFLSATGGXXXXXXXXXXXXXXXXXXXXXXXSSGASLRLYQLPAVREACGGFDPKRCIGEGGFGKVRKGRGLG 1191 +AN RD QYDATLLHWAVNEGH PTVEHLLACGADVRL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DAS R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADGN PGSTFH SVPEEA + IR+A++ GPAS D VVRAATVSSELLLETL ACRSWGELFENRHFDVLSKECQEHRERLRGVIQGLADQGKAEGLEPCLKAMDLLNSALGLHEDMRSGTKPVPL GG XXXXXXXXXXXXXXXXXXXXX ASLRLYQLPAVREACGGFD KRCIGEGGFGKV +G +G Sbjct: 30 KANARDSQYDATLLHWAVNEGHMPTVEHLLACGADVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASNRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGNIPGSTFHHSVPEEAIRDIRSALQRGPASGDGVVRAATVSSELLLETLRACRSWGELFENRHFDVLSKECQEHRERLRGVIQGLADQGKAEGLEPCLKAMDLLNSALGLHEDMRSGTKPVPL------------------------------------------------GGXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXASLRLYQLPAVREACGGFDQKRCIGEGGFGKVYRGSMMG 374 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7578.17874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7578.17874.1 >prot_M-pyrifera_M_contig7578.17874.1 ID=prot_M-pyrifera_M_contig7578.17874.1|Name=mRNA_M-pyrifera_M_contig7578.17874.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=397bp QANVRDGQYDATLLHWAVNEGHTPTVEHLLACGADVRLTDGKHSATPLHWback to top mRNA from alignment at M-pyrifera_M_contig7578:4719..12669+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7578.17874.1 ID=mRNA_M-pyrifera_M_contig7578.17874.1|Name=mRNA_M-pyrifera_M_contig7578.17874.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7951bp|location=Sequence derived from alignment at M-pyrifera_M_contig7578:4719..12669+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7578:4719..12669+ >mRNA_M-pyrifera_M_contig7578.17874.1 ID=mRNA_M-pyrifera_M_contig7578.17874.1|Name=mRNA_M-pyrifera_M_contig7578.17874.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2382bp|location=Sequence derived from alignment at M-pyrifera_M_contig7578:4719..12669+ (Macrocystis pyrifera P11B4 male)back to top |