prot_M-pyrifera_M_contig75553.17819.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig75553.17819.1
Unique Nameprot_M-pyrifera_M_contig75553.17819.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length57
Homology
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BLAST of mRNA_M-pyrifera_M_contig75553.17819.1 vs. uniprot
Match: D7FHI0_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI0_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 8.950e-26
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 0 
Query:    1 ESYSQLREAAKQIIARVAGRLSGTVGRSGLMDPAVTGLERAAVVANTPITFRPRELL 57
            E+YSQLREAAKQIIARVAGRLSGTVG+SGLMDPAVTGLERAAVVANTPITFRPRELL
Sbjct: 1198 ETYSQLREAAKQIIARVAGRLSGTVGKSGLMDPAVTGLERAAVVANTPITFRPRELL 1254
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BLAST of mRNA_M-pyrifera_M_contig75553.17819.1 vs. uniprot
Match: A0A6H5JDL7_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL7_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 3.750e-24
Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 0 
Query:    1 ESYSQLREAAKQIIARVAGRLSGTVGRSGLMDPAVTGLERAAVVANTPITFRPRELL 57
            E+YS+LREAAKQIIARVAGRLSGTVG+SGLMDPAVTGLERAAVVANTPITFR RELL
Sbjct: 1236 ETYSKLREAAKQIIARVAGRLSGTVGKSGLMDPAVTGLERAAVVANTPITFRSRELL 1292
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75553.17819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHI0_ECTSI8.950e-2696.49LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JDL7_9PHAE3.750e-2492.98LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75553contigM-pyrifera_M_contig75553:696..866 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75553.17819.1mRNA_M-pyrifera_M_contig75553.17819.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig75553 696..866 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig75553.17819.1 ID=prot_M-pyrifera_M_contig75553.17819.1|Name=mRNA_M-pyrifera_M_contig75553.17819.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=57bp
ESYSQLREAAKQIIARVAGRLSGTVGRSGLMDPAVTGLERAAVVANTPIT
FRPRELL
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