mRNA_M-pyrifera_M_contig100827.178.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100827.178.1 vs. uniprot
Match: A0A2D4TC56_9GAMM (Small-conductance mechanosensitive channel n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D4TC56_9GAMM) HSP 1 Score: 171 bits (434), Expect = 1.600e-52 Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 1 Query: 1 NTATYGARKVRSAIIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEQPAPTNTAPATES-LQPAAIEAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 312 +TATY ARKVRSA+IRQVKTAFDLAGISMPSEAREITFPEGVQVALAE APTNTAPA E+ LQP EAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL Sbjct: 80 DTATYDARKVRSAVIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEPSAPTNTAPAPENPLQPPTSEAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 184
BLAST of mRNA_M-pyrifera_M_contig100827.178.1 vs. uniprot
Match: A0A3C1KSD9_9GAMM (Small-conductance mechanosensitive channel n=6 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KSD9_9GAMM) HSP 1 Score: 171 bits (434), Expect = 2.620e-49 Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 1 Query: 1 NTATYGARKVRSAIIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEQPAPTNTAPATES-LQPAAIEAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 312 +TATY ARKVRSA+IRQVKTAFDLAGISMPSEAREITFPEGVQVALAE APTNTAPA E+ LQP EAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL Sbjct: 372 DTATYDARKVRSAVIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEPSAPTNTAPAPENPLQPPTSEAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 476
BLAST of mRNA_M-pyrifera_M_contig100827.178.1 vs. uniprot
Match: A0A2E7BZH2_9GAMM (Small-conductance mechanosensitive channel n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7BZH2_9GAMM) HSP 1 Score: 106 bits (265), Expect = 6.460e-25 Identity = 61/104 (58.65%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 1 NTATYGARKVRSAIIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEQPAPTNTAPATESLQPAAIEAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 312 NTATY A+KVRSA IR VKTAF+ AGISMP E REITFP G++V L E ++S A G H+AEG LKN+D DIE+QA+A+RLPEGG+NLL Sbjct: 367 NTATYDAQKVRSAAIRLVKTAFEQAGISMPGEVREITFPAGLRVDLQEPSGEAGVTFPSDSTPTAPDNVG--THIAEGDLKNTDSDIERQAQASRLPEGGENLL 468
BLAST of mRNA_M-pyrifera_M_contig100827.178.1 vs. uniprot
Match: A0A557R2D8_9RHOO (Small-conductance mechanosensitive channel n=1 Tax=Denitromonas halophilus TaxID=1629404 RepID=A0A557R2D8_9RHOO) HSP 1 Score: 85.9 bits (211), Expect = 2.040e-17 Identity = 55/101 (54.46%), Postives = 65/101 (64.36%), Query Frame = 1 Query: 13 YGARKVRSAIIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEQ-PAPTNTAPATESLQPAAIEAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 312 Y K+RSA+IRQVK AF+ GISMP E REI FPEGV V + +Q PAPT AP QP A + G AEGGL + D+ + QAR ARLPE G +LL Sbjct: 375 YNGFKLRSALIRQVKNAFETHGISMPDENREILFPEGVPVRMLDQTPAPT-AAPTVADTQPVADDTTGSE--AEGGLVSEDEQLRAQARKARLPEEGADLL 472
BLAST of mRNA_M-pyrifera_M_contig100827.178.1 vs. uniprot
Match: A0A517RM59_9PLAN (Small-conductance mechanosensitive channel n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RM59_9PLAN) HSP 1 Score: 82.0 bits (201), Expect = 4.900e-16 Identity = 53/106 (50.00%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 1 NTATYGARKVRSAIIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEQ--PAPTNTAPATESLQPAAIEAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 312 NTA + KVRSA+IR K AFD AGISMP EAREI FPEGV V + + P E L P+ EA A+ AEG L + ++IE+QA+ +R PE G NLL Sbjct: 388 NTAEFSTFKVRSAVIRLTKLAFDQAGISMPDEAREIVFPEGVPVQMISEHDQIPEPVVIPQEQLTPSREEAAS-ANEAEGDLTSEANEIEQQAKQSRSPESGQNLL 492
BLAST of mRNA_M-pyrifera_M_contig100827.178.1 vs. uniprot
Match: UPI001C862FCD (mechanosensitive ion channel family protein n=1 Tax=Desulfuromonas versatilis TaxID=2802975 RepID=UPI001C862FCD) HSP 1 Score: 78.6 bits (192), Expect = 7.990e-15 Identity = 48/102 (47.06%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 7 ATYGARKVRSAIIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEQPAPTNTAPATESLQPAAIEAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 312 + Y KV+S++IR VK AF+ GISMP EAREI FP+GV V + E P P E AA+E G AEG L N + + +QAR AR+PE G +LL Sbjct: 366 SAYNGPKVKSSLIRLVKRAFEGRGISMPDEAREIVFPDGVPVRMLEAAEPPAKKPRPEE---AAVETGAVTTAAEGHLANEEGPLREQARRARMPEEGASLL 464
BLAST of mRNA_M-pyrifera_M_contig100827.178.1 vs. uniprot
Match: UPI000408FDAA (mechanosensitive ion channel n=1 Tax=Desulfuromonas sp. TF TaxID=1232410 RepID=UPI000408FDAA) HSP 1 Score: 77.8 bits (190), Expect = 1.460e-14 Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 13 YGARKVRSAIIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEQPAPTNTAPATESLQPAAIEAGGE---AHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 312 Y K+RS++IR+VK +F GISMP EAREI FP GV V L+ + P AP E ++ A +EA E A AEG L++ + I +QAR AR+PE G++LL Sbjct: 351 YNGPKIRSSLIRRVKRSFMDQGISMPDEAREIVFPRGVPVRLSREEVPLEEAPPAE-IRRAELEAEPEEPVATAAEGALESEEGKIREQARTARVPEEGEDLL 452
BLAST of mRNA_M-pyrifera_M_contig100827.178.1 vs. uniprot
Match: A0A356A8G7_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356A8G7_9PLAN) HSP 1 Score: 72.8 bits (177), Expect = 3.980e-14 Identity = 45/102 (44.12%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 7 ATYGARKVRSAIIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEQPAPTNTAPATESLQPAAIEAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 312 A Y + KV SAIIR VK AFD AGISMP EARE+ FP GV V + T + +P+ +++ AEG L + +I +QA+ +R PE G NLL Sbjct: 41 AKYSSLKVNSAIIRLVKQAFDEAGISMPDEAREVVFPNGVPVHMISSQQFKETE--ASNKKPSGESPDSQSNAAEGDLSSESKEINEQAQKSRSPESGQNLL 140
BLAST of mRNA_M-pyrifera_M_contig100827.178.1 vs. uniprot
Match: A0A3E0PNG2_9BACT (BON domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PNG2_9BACT) HSP 1 Score: 74.3 bits (181), Expect = 2.490e-13 Identity = 50/104 (48.08%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 1 NTATYGARKVRSAIIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEQPAPTNTAPATESLQPAAIEAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 312 N + KV S++IR K AFD A ISMP EARE+ FP GV V Q P A E A IE AH AEG L + +DIE+QAR AR PE G +LL Sbjct: 368 NVHKHSFLKVLSSVIRLTKQAFDEAEISMPDEAREVVFPAGVPVITPGQEPPR----APEKRAAATIEDKSAAHSAEGDLASEAEDIEQQARNARSPEAGKDLL 467
BLAST of mRNA_M-pyrifera_M_contig100827.178.1 vs. uniprot
Match: UPI001CD4C2DC (mechanosensitive ion channel family protein n=1 Tax=Desulfuromonas sp. CSMB_57 TaxID=2807629 RepID=UPI001CD4C2DC) HSP 1 Score: 72.8 bits (177), Expect = 8.750e-13 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = 1 Query: 13 YGARKVRSAIIRQVKTAFDLAGISMPSEAREITFPEGVQVAL-----AEQPAPTNTAPATESLQPAAIEAGGEAHLAEGGLKNSDDDIEKQARAARLPEGGDNLL 312 Y KV+S++IR VK A++ GISMP EARE+ FPEG+ V + AEQP L+PA + + EG L + D+ +++QAR +R+PE G NLL Sbjct: 373 YNGAKVKSSLIRLVKRAYEAHGISMPDEAREVLFPEGISVRMLENLAAEQPEGLQRPLPQPVLEPATLSS-----ETEGNLVSEDEQLQEQARKSRIPEEGKNLL 472 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100827.178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100827.178.1 >prot_M-pyrifera_M_contig100827.178.1 ID=prot_M-pyrifera_M_contig100827.178.1|Name=mRNA_M-pyrifera_M_contig100827.178.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp NTATYGARKVRSAIIRQVKTAFDLAGISMPSEAREITFPEGVQVALAEQPback to top mRNA from alignment at M-pyrifera_M_contig100827:360..674- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100827.178.1 ID=mRNA_M-pyrifera_M_contig100827.178.1|Name=mRNA_M-pyrifera_M_contig100827.178.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=315bp|location=Sequence derived from alignment at M-pyrifera_M_contig100827:360..674- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100827:360..674- >mRNA_M-pyrifera_M_contig100827.178.1 ID=mRNA_M-pyrifera_M_contig100827.178.1|Name=mRNA_M-pyrifera_M_contig100827.178.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig100827:360..674- (Macrocystis pyrifera P11B4 male)back to top |