prot_M-pyrifera_M_contig75332.17781.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig75332.17781.1
Unique Nameprot_M-pyrifera_M_contig75332.17781.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length87
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75332.17781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013049Spo11/DNA topoisomerase VI, subunit A, N-terminalPFAMPF04406TP6A_Ncoord: 22..81
e-value: 7.9E-16
score: 57.8
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 16..84
e-value: 1.2E-5
score: 27.0
NoneNo IPR availablePANTHERPTHR10848:SF0MEIOTIC RECOMBINATION PROTEIN SPO11coord: 19..87
IPR002815Spo11/DNA topoisomerase VI subunit APANTHERPTHR10848MEIOTIC RECOMBINATION PROTEIN SPO11coord: 19..87
IPR036078Spo11/DNA topoisomerase VI subunit A superfamilySUPERFAMILY56726DNA topoisomerase IV, alpha subunitcoord: 21..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75332contigM-pyrifera_M_contig75332:796..1056 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75332.17781.1mRNA_M-pyrifera_M_contig75332.17781.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig75332 772..1056 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig75332.17781.1 ID=prot_M-pyrifera_M_contig75332.17781.1|Name=mRNA_M-pyrifera_M_contig75332.17781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp
MLSPASLWEPSTVRRFLNRSKSLAALWSVLKSSHSLLHGKKSATLREAYY
MDAALFSKQEDTNRAVQQVCGMLHIPRHSLGFMASAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013049Spo11/TopoVI_A_N
IPR036388WH-like_DNA-bd_sf
IPR002815Spo11/TopoVI_A
IPR036078Spo11/TopoVI_A_sf