mRNA_M-pyrifera_M_contig75225.17759.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75225.17759.1 vs. uniprot
Match: D8LBU7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBU7_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 4.000e-22 Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 1 Query: 1 KKKINDSFNRSEEDFEGDLRAYNDYLEIREDIIYGLCSGVKDEISQAQAKVQQYEDGHRDEITKNAAKK 207 +K+I FNRSEEDF GDLRAYNDYLE ED+IYGLCSG K E +AQA V++YED HR EITKNAA+K Sbjct: 81 RKRITKIFNRSEEDFGGDLRAYNDYLETMEDVIYGLCSGDKGEADRAQATVREYEDRHRGEITKNAARK 149
BLAST of mRNA_M-pyrifera_M_contig75225.17759.1 vs. uniprot
Match: A0A1G4KAR3_9SACH (RNA polymerase II transcription factor B subunit 3 n=1 Tax=Lachancea mirantina TaxID=1230905 RepID=A0A1G4KAR3_9SACH) HSP 1 Score: 53.5 bits (127), Expect = 1.330e-6 Identity = 28/65 (43.08%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 1 KKKINDSFNRSEEDFEGDLRAYNDYLEIREDIIYGLCSGVKDEISQAQAKVQQYEDGHRDEITKN 195 +K++++ FN++ +DF+GDL AYN YLE EDIIY L +GV ++++ + K++ YED ++ I N Sbjct: 82 RKRVSNVFNKTMDDFDGDLAAYNKYLEEVEDIIYNLNNGV--DVAKTEEKLRTYEDLNKQLIMSN 144
BLAST of mRNA_M-pyrifera_M_contig75225.17759.1 vs. uniprot
Match: A0A1Y1V063_9FUNG (RNA polymerase II transcription factor B subunit 3 n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1V063_9FUNG) HSP 1 Score: 51.6 bits (122), Expect = 2.570e-6 Identity = 27/68 (39.71%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 1 KKKINDSFNRSEEDFEGDLRAYNDYLEIREDIIYGLCSGVKDEISQAQAKVQQYEDGHRDEITKNAAK 204 +KK+ FN+ EDF GDLR YNDYLE+ E+I++ L + + ++ + K++++ ++ IT NAAK Sbjct: 87 RKKVGKLFNKRLEDFGGDLRKYNDYLEVVEEIMFNLANNI--DVKETNEKIEKWRIENQALITTNAAK 152
BLAST of mRNA_M-pyrifera_M_contig75225.17759.1 vs. uniprot
Match: A0A553NQ35_TIGCA (RING-type domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NQ35_TIGCA) HSP 1 Score: 52.0 bits (123), Expect = 4.610e-6 Identity = 27/65 (41.54%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 1 KKKINDSFNRSEEDFEGDLRAYNDYLEIREDIIYGLCSGVKDEISQAQAKVQQYEDGHRDEITKN 195 +K+I +N EDF+ DL+AYNDYLE+ ED+I+ LC+ + +I + ++ +Y++ ++D ITKN Sbjct: 75 RKRILRDYNMKREDFD-DLQAYNDYLEMVEDLIFNLCNNI--DILETNKRIAEYKEKNKDFITKN 136
BLAST of mRNA_M-pyrifera_M_contig75225.17759.1 vs. uniprot
Match: UPI001C9C0920 (CDK-activating kinase assembly factor MAT1 n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9C0920) HSP 1 Score: 51.2 bits (121), Expect = 8.800e-6 Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 1 KKKINDSFNRSEEDFEGDLRAYNDYLEIREDIIYGLCSGVKDEISQAQAKVQQYEDGHRDEITKN 195 +K++ FN+ EEDFE LRAYNDYLE E I+Y L + + ++ + +++QY+ ++D+I KN Sbjct: 75 RKRVLRDFNKKEEDFEN-LRAYNDYLEEVETIVYNLANNI--DVVETNKRIEQYKRDNKDQILKN 136
BLAST of mRNA_M-pyrifera_M_contig75225.17759.1 vs. uniprot
Match: A0A6H0Y5W0_9PEZI (RNA polymerase II transcription factor B subunit 3 n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0Y5W0_9PEZI) HSP 1 Score: 51.2 bits (121), Expect = 9.050e-6 Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 22 FNRSEEDFEGDLRAYNDYLEIREDIIYGLCSGVKDEISQAQAKVQQYEDGHRDEITKNA 198 FN+ E+DFE DLR+YNDYL EDI + L + + ++ A+++QY+ H+DEI +NA Sbjct: 109 FNKREDDFE-DLRSYNDYLNEVEDITFNLVNNI--DVDANNARLEQYQKAHQDEIRENA 164
BLAST of mRNA_M-pyrifera_M_contig75225.17759.1 vs. uniprot
Match: C5DM07_LACTC (RNA polymerase II transcription factor B subunit 3 n=7 Tax=Lachancea TaxID=300275 RepID=C5DM07_LACTC) HSP 1 Score: 50.8 bits (120), Expect = 1.210e-5 Identity = 26/65 (40.00%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 1 KKKINDSFNRSEEDFEGDLRAYNDYLEIREDIIYGLCSGVKDEISQAQAKVQQYEDGHRDEITKN 195 +K++ + FN++ +DFEGDL+A+N YLE EDI+Y L +G+ +++ + K++ YED ++ I N Sbjct: 84 RKRVFNVFNKTLDDFEGDLKAFNKYLEEVEDIVYNLDNGI--DVANTEEKLRTYEDLNKQLIMAN 146
BLAST of mRNA_M-pyrifera_M_contig75225.17759.1 vs. uniprot
Match: A0A1D8PN00_CANAL (RNA polymerase II transcription factor B subunit 3 n=4 Tax=Candida TaxID=1535326 RepID=A0A1D8PN00_CANAL) HSP 1 Score: 50.8 bits (120), Expect = 1.230e-5 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 1 Query: 1 KKKINDSFNRSEEDFEGDLRAYNDYLEIREDIIYGLC-SGVKDEISQAQAKVQQYEDGHRDEI 186 +KK++ +N++EEDF GDL+ YN YLE EDII+ L S K EI + ++ +YE H+ EI Sbjct: 86 RKKVSAIYNKTEEDFPGDLQGYNRYLENIEDIIFKLSYSDDKQEIETVETELNKYEQEHKLEI 148
BLAST of mRNA_M-pyrifera_M_contig75225.17759.1 vs. uniprot
Match: A0A0L0HV92_SPIPD (RNA polymerase II transcription factor B subunit 3 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HV92_SPIPD) HSP 1 Score: 48.9 bits (115), Expect = 5.760e-5 Identity = 26/68 (38.24%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 1 KKKINDSFNRSEEDFEGDLRAYNDYLEIREDIIYGLCSGVKDEISQAQAKVQQYEDGHRDEITKNAAK 204 +K+I +N+ EDF+G+LRAYNDYLE E+I++ L + V ++ + ++++YE ++D I N K Sbjct: 81 RKRIGRVYNKRLEDFKGNLRAYNDYLEDVEEIMFNLINDV--DVKETNERIKKYEQENKDLINANLQK 146
BLAST of mRNA_M-pyrifera_M_contig75225.17759.1 vs. uniprot
Match: A0A293LYA8_ORNER (CDK-activating kinase assembly factor (Fragment) n=2 Tax=Ornithodoros TaxID=6937 RepID=A0A293LYA8_ORNER) HSP 1 Score: 48.9 bits (115), Expect = 5.800e-5 Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 1 KKKINDSFNRSEEDFEGDLRAYNDYLEIREDIIYGLCSGVKDEISQAQAKVQQYEDGHRDEITKNAAK 204 +K++ FN+ EEDFE LRAYNDYLE E IIY L + V +I + K++QY+ ++ +I K +K Sbjct: 75 RKRVLKDFNKHEEDFES-LRAYNDYLEEVETIIYNLTNDV--DIEGTRRKIEQYKRENKTQIAKGKSK 139 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75225.17759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75225.17759.1 >prot_M-pyrifera_M_contig75225.17759.1 ID=prot_M-pyrifera_M_contig75225.17759.1|Name=mRNA_M-pyrifera_M_contig75225.17759.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=70bp KKKINDSFNRSEEDFEGDLRAYNDYLEIREDIIYGLCSGVKDEISQAQAKback to top mRNA from alignment at M-pyrifera_M_contig75225:613..822- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75225.17759.1 ID=mRNA_M-pyrifera_M_contig75225.17759.1|Name=mRNA_M-pyrifera_M_contig75225.17759.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=210bp|location=Sequence derived from alignment at M-pyrifera_M_contig75225:613..822- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75225:613..822- >mRNA_M-pyrifera_M_contig75225.17759.1 ID=mRNA_M-pyrifera_M_contig75225.17759.1|Name=mRNA_M-pyrifera_M_contig75225.17759.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig75225:613..822- (Macrocystis pyrifera P11B4 male)back to top |