prot_M-pyrifera_M_contig75039.17727.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig75039.17727.1
Unique Nameprot_M-pyrifera_M_contig75039.17727.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length47
Homology
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BLAST of mRNA_M-pyrifera_M_contig75039.17727.1 vs. uniprot
Match: A0A6H5KC52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC52_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.150e-18
Identity = 38/46 (82.61%), Postives = 45/46 (97.83%), Query Frame = 0 
Query:    1 LGRGYIDRELLKARQAQRYFLHTVTPAAVLIQSQWRGYTKRRDLAE 46
            +GRGYIDREL+KAR+AQR+FLHT+TPA VLIQSQWRGYT+RRDLA+
Sbjct: 1376 VGRGYIDRELVKARRAQRHFLHTITPACVLIQSQWRGYTRRRDLAK 1421
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BLAST of mRNA_M-pyrifera_M_contig75039.17727.1 vs. uniprot
Match: D7FMH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH0_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 2.940e-18
Identity = 37/46 (80.43%), Postives = 45/46 (97.83%), Query Frame = 0 
Query:    1 LGRGYIDRELLKARQAQRYFLHTVTPAAVLIQSQWRGYTKRRDLAE 46
            +GRGYIDREL+KAR++QR+FLHT+TPA VLIQSQWRGYT+RRDLA+
Sbjct: 1346 VGRGYIDRELVKARRSQRHFLHTITPACVLIQSQWRGYTRRRDLAK 1391
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75039.17727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC52_9PHAE1.150e-1882.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMH0_ECTSI2.940e-1880.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 26..43
e-value: 2.1E-5
score: 23.9
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 25..46
score: 8.645
NoneNo IPR availableGENE3D1.20.5.190coord: 1..44
e-value: 7.0E-7
score: 30.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75039contigM-pyrifera_M_contig75039:278..418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75039.17727.1mRNA_M-pyrifera_M_contig75039.17727.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig75039 278..418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig75039.17727.1 ID=prot_M-pyrifera_M_contig75039.17727.1|Name=mRNA_M-pyrifera_M_contig75039.17727.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=47bp
LGRGYIDRELLKARQAQRYFLHTVTPAAVLIQSQWRGYTKRRDLAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS