prot_M-pyrifera_M_contig74832.17689.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig74832.17689.1
Unique Nameprot_M-pyrifera_M_contig74832.17689.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length56
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig74832.17689.1 vs. uniprot
Match: A0A6H5JKE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKE3_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.260e-21
Identity = 41/55 (74.55%), Postives = 47/55 (85.45%), Query Frame = 0 
Query:    1 MPEDYPKKWLTFCAEGSLDAIEAFLGSAGKPLVALMSLRGALQVGYPQFVEMIAS 55
            MPE YPK W TFC EG + +IEAFLGS GKPLVAL+SLRGALQVGYP FV+MI++
Sbjct:  157 MPETYPKNWTTFCVEGKMTSIEAFLGSKGKPLVALLSLRGALQVGYPHFVQMIST 211
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74832.17689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JKE3_9PHAE1.260e-2174.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74832contigM-pyrifera_M_contig74832:215..382 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74832.17689.1mRNA_M-pyrifera_M_contig74832.17689.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig74832 191..382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig74832.17689.1 ID=prot_M-pyrifera_M_contig74832.17689.1|Name=mRNA_M-pyrifera_M_contig74832.17689.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp
MPEDYPKKWLTFCAEGSLDAIEAFLGSAGKPLVALMSLRGALQVGYPQFV
EMIAS*
back to top