mRNA_M-pyrifera_M_contig73539.17429.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig73539.17429.1 vs. uniprot
Match: A0A072UPU5_MEDTR (Putative transcription factor C2H2 family n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A072UPU5_MEDTR) HSP 1 Score: 60.8 bits (146), Expect = 1.200e-8 Identity = 33/102 (32.35%), Postives = 52/102 (50.98%), Query Frame = 1 Query: 31 CNRQQSREAAAIWEEEVLPLAKAVGVPIAPGCSASPERSVFVKHEQMKDFSSSEYATCTSCGKHFRDESFLDRHLQSKHADVLGDPPEATLCLADHCRFLGC 336 C+R++SR A+ + EE + P + ++ C PE +F E+ + + C C K FR+E FLD+HL ++H ++L CLAD C L C Sbjct: 56 CSRERSRVASKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEEHRIYLDRNEWRCGYCKKSFREEKFLDQHLDNRHCNLLN--LSHGKCLADLCGALHC 155
BLAST of mRNA_M-pyrifera_M_contig73539.17429.1 vs. uniprot
Match: A0A7S0RLY2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RLY2_9CHLO) HSP 1 Score: 60.8 bits (146), Expect = 1.600e-8 Identity = 37/104 (35.58%), Postives = 52/104 (50.00%), Query Frame = 1 Query: 31 CNRQQSREAAAIWEEEVLPL--AKAVGVPIAPGCSASPERSVFVKHEQMKDFSSSEYATCTSCGKHFRDESFLDRHLQSKHADVLGDPPEATLCLADHCRFLGC 336 C+R SR A I ++ V K + C +P + ++HEQ K + CT C K F++E +LD+HLQ KH D + P AT CLA+ C L C Sbjct: 37 CDRAVSRHARQILQQYVFKHMHGKQRVDQLPASCPLAPLNDILLEHEQHKARKNKAQHRCTYCQKVFKNEFYLDQHLQRKHVDTI--PHTATSCLAEVCDVLQC 138
BLAST of mRNA_M-pyrifera_M_contig73539.17429.1 vs. uniprot
Match: A0A061RS28_9CHLO (C2h2-like zinc finger protein isoform 1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RS28_9CHLO) HSP 1 Score: 59.3 bits (142), Expect = 5.010e-8 Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 1 Query: 31 CNRQQSREAAAIWEEEVLPLAKAVGVPIAPGCSASPERSVFVKHEQMKDFSSSEYATCTSCGKHFRDESFLDRHLQSKHADVLGDPPEATLCLADHCRFL 330 CNR +SR A + + V P + G C PE+ +++ E K S C CGK FR E +LD+H++++H D L + ++CLAD L Sbjct: 19 CNRGESRLAREVLRQIVYPHLEQSGFVPPAKCKLKPEQDMYLAQEDHKVEIRSNNWKCKYCGKTFRGEHYLDKHMENRHNDTL----QGSVCLADFAEAL 114
BLAST of mRNA_M-pyrifera_M_contig73539.17429.1 vs. uniprot
Match: A0A067LND0_JATCU (C2H2-type domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LND0_JATCU) HSP 1 Score: 58.5 bits (140), Expect = 7.260e-8 Identity = 35/102 (34.31%), Postives = 49/102 (48.04%), Query Frame = 1 Query: 31 CNRQQSREAAAIWEEEVLPLAKAVGVPIAPGCSASPERSVFVKHEQMKDFSSSEYATCTSCGKHFRDESFLDRHLQSKHADVLGDPPEATLCLADHCRFLGC 336 C+R++SR A I EE +P + I+ C PE +F E+ K C C K F DE++LD+H ++H D+L CLAD C L C Sbjct: 38 CSRERSRAAWKIIEEYFMPFVEKERYHISTRCRLHPENDLFRDQEEHKIHQDLHDWRCGYCKKVFYDETYLDKHFDNRHYDILN--VSHGRCLADVCGALHC 137
BLAST of mRNA_M-pyrifera_M_contig73539.17429.1 vs. uniprot
Match: UPI0009D75289 (uncharacterized protein LOC105633316 isoform X1 n=2 Tax=Jatropha curcas TaxID=180498 RepID=UPI0009D75289) HSP 1 Score: 58.5 bits (140), Expect = 8.210e-8 Identity = 35/102 (34.31%), Postives = 49/102 (48.04%), Query Frame = 1 Query: 31 CNRQQSREAAAIWEEEVLPLAKAVGVPIAPGCSASPERSVFVKHEQMKDFSSSEYATCTSCGKHFRDESFLDRHLQSKHADVLGDPPEATLCLADHCRFLGC 336 C+R++SR A I EE +P + I+ C PE +F E+ K C C K F DE++LD+H ++H D+L CLAD C L C Sbjct: 55 CSRERSRAAWKIIEEYFMPFVEKERYHISTRCRLHPENDLFRDQEEHKIHQDLHDWRCGYCKKVFYDETYLDKHFDNRHYDILN--VSHGRCLADVCGALHC 154
BLAST of mRNA_M-pyrifera_M_contig73539.17429.1 vs. uniprot
Match: A0A061S337_9CHLO (C2h2-like zinc finger protein isoform 1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S337_9CHLO) HSP 1 Score: 58.2 bits (139), Expect = 1.100e-7 Identity = 33/100 (33.00%), Postives = 49/100 (49.00%), Query Frame = 1 Query: 31 CNRQQSREAAAIWEEEVLPLAKAVGVPIAPGCSASPERSVFVKHEQMKDFSSSEYATCTSCGKHFRDESFLDRHLQSKHADVLGDPPEATLCLADHCRFL 330 CNR +SR A + + V P + G C PE+ +++ E K S C CGK FR E +LD+H+ ++H D L + ++CLAD L Sbjct: 19 CNRGESRLAREVLRQIVYPHLEQSGFVPPAKCKLKPEQDMYLAQEDHKVEIRSNNWKCKYCGKTFRGEHYLDKHMXNRHNDTL----QGSVCLADFAEAL 114
BLAST of mRNA_M-pyrifera_M_contig73539.17429.1 vs. uniprot
Match: A0A7S4RK22_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RK22_9DINO) HSP 1 Score: 58.2 bits (139), Expect = 1.230e-7 Identity = 36/102 (35.29%), Postives = 50/102 (49.02%), Query Frame = 1 Query: 31 CNRQQSREAAAIWEEEVLPLAKAVGVPIAPG-CSASPERSVFVKHEQMKD---FSSSEYATCTSCGKHFRDESFLDRHLQSKHADVLGDPPEATLCLADHCR 324 C+R SR + E EVL A G+ P C P R ++ +HE+ K S C CGK FR+E +LD HL+ +H + P +CLAD+C Sbjct: 48 CSRPISRNVRTLLESEVLKPAVRAGLEGWPARCPLDPARDLYGQHEKQKQRARVSGDLLWKCGICGKAFRNEHYLDLHLERRHMNAT---PAGGVCLADYCE 146
BLAST of mRNA_M-pyrifera_M_contig73539.17429.1 vs. uniprot
Match: A0A2Z6PGV7_TRISU (C2H2-type domain-containing protein n=3 Tax=Trifolium TaxID=3898 RepID=A0A2Z6PGV7_TRISU) HSP 1 Score: 55.5 bits (132), Expect = 8.640e-7 Identity = 33/102 (32.35%), Postives = 51/102 (50.00%), Query Frame = 1 Query: 31 CNRQQSREAAAIWEEEVLPLAKAVGVPIAPGCSASPERSVFVKHEQMKDFSSSEYATCTSCGKHFRDESFLDRHLQSKHADVLGDPPEATLCLADHCRFLGC 336 C+R++SR A + EE + P + ++ C E +F E+ K + C C K FR+E F+D+HL ++H ++L D CLAD C L C Sbjct: 19 CSRERSRAAWKVIEEYLTPFVEKENYQLSKKCRLHLENDMFRDQEEHKIYLDRNEWQCGYCKKSFREEKFIDQHLDNRHYNLL-DLSHGK-CLADLCGALHC 118
BLAST of mRNA_M-pyrifera_M_contig73539.17429.1 vs. uniprot
Match: A0A7S0LRS2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LRS2_9EUKA) HSP 1 Score: 52.4 bits (124), Expect = 2.720e-6 Identity = 34/107 (31.78%), Postives = 49/107 (45.79%), Query Frame = 1 Query: 10 HLRRATTCNRQQSREAAAIWEEEVLPLAKAVGVPIAPGCSASPERSVFVKHEQMKDFSSSEYATCTSCGKHFRDESFLDRHLQSKHADVLGDPPEATLCLADHCRFL 330 H C+R+ +REA + + A G ++ C PE K E K ++ C C K FR+E FLD HL +KH+D L +CLA++C L Sbjct: 21 HADHQPRCDRELAREARERVDALAISAASWAGSELSSTCVLHPELDRLAKQESGKKRKQGLWS-CPECKKKFRNERFLDLHLDNKHSDSLDFVNH--VCLAEYCDLL 124
BLAST of mRNA_M-pyrifera_M_contig73539.17429.1 vs. uniprot
Match: A0A8K0H2M0_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0H2M0_9ROSA) HSP 1 Score: 53.5 bits (127), Expect = 5.950e-6 Identity = 31/102 (30.39%), Postives = 50/102 (49.02%), Query Frame = 1 Query: 31 CNRQQSREAAAIWEEEVLPLAKAVGVPIAPGCSASPERSVFVKHEQMKDFSSSEYATCTSCGKHFRDESFLDRHLQSKHADVLGDPPEATLCLADHCRFLGC 336 C+R++SR A I EE ++P ++ C P+ ++ EQ K C C K F +E++LD+H ++H ++L + CLAD C L C Sbjct: 94 CSRERSRAAWKIIEEYLMPFVDKERYQLSRRCRLHPDNDLYRDQEQHKIRVDINEWKCEYCKKSFYEETYLDKHFDNRHYNLLN--VSHSRCLADVCGALHC 193 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73539.17429.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73539.17429.1 >prot_M-pyrifera_M_contig73539.17429.1 ID=prot_M-pyrifera_M_contig73539.17429.1|Name=mRNA_M-pyrifera_M_contig73539.17429.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp MDIHLRRATTCNRQQSREAAAIWEEEVLPLAKAVGVPIAPGCSASPERSVback to top mRNA from alignment at M-pyrifera_M_contig73539:431..892+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig73539.17429.1 ID=mRNA_M-pyrifera_M_contig73539.17429.1|Name=mRNA_M-pyrifera_M_contig73539.17429.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig73539:431..892+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73539:431..892+ >mRNA_M-pyrifera_M_contig73539.17429.1 ID=mRNA_M-pyrifera_M_contig73539.17429.1|Name=mRNA_M-pyrifera_M_contig73539.17429.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig73539:431..892+ (Macrocystis pyrifera P11B4 male)back to top |