Homology
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match:
A0A6H5KYH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH2_9PHAE)
HSP 1 Score: 150 bits (378), Expect = 1.020e-41
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 1
Query: 1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 222
KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQ DVL+R V
Sbjct: 341 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCV 414
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match:
D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)
HSP 1 Score: 150 bits (378), Expect = 1.720e-40
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 1
Query: 1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 222
KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQ DVL+R V
Sbjct: 702 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCV 775
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match:
A0A835YM25_9STRA (PRP1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM25_9STRA)
HSP 1 Score: 118 bits (295), Expect = 3.050e-29
Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 1
Query: 1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 222
KS+EALKRCDNDPHVITAVAR F DRKY KARKWFNRA+ LD + GDAWAA++AFELQQGT +QADV+ R V
Sbjct: 702 KSVEALKRCDNDPHVITAVARLFEKDRKYPKARKWFNRAVALDADNGDAWAAFFAFELQQGTAEQQADVIARCV 775
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match:
A0A438KFT4_VITVI (Protein STABILIZED 1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438KFT4_VITVI)
HSP 1 Score: 105 bits (262), Expect = 2.780e-27
Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 222
KSL+ALK+CD+DPHVI AVA+ FW DRK KAR W NRA+TL P++GD WA YY FE+Q G+E Q DVL R V
Sbjct: 39 KSLDALKKCDHDPHVIAAVAKLFWHDRKVDKARTWLNRAVTLAPDIGDFWALYYKFEVQHGSEENQKDVLRRCV 112
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match:
A0A2P6NJY6_9EUKA (PRP1_N domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NJY6_9EUKA)
HSP 1 Score: 111 bits (277), Expect = 8.250e-27
Identity = 49/74 (66.22%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 222
KS++ALKRCDNDP VI AVA+ FWADRKY K R WFNRA+TL+P++GDAWA +Y FE+Q GTE Q ++L R V
Sbjct: 862 KSVDALKRCDNDPFVIVAVAKVFWADRKYEKTRTWFNRAVTLNPDLGDAWAYFYKFEIQHGTEEHQQELLKRCV 935
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match:
A0A7C9DKB5_OPUST (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DKB5_OPUST)
HSP 1 Score: 105 bits (262), Expect = 1.070e-26
Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 1
Query: 1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNR 216
KS +ALK+CD+DPHVI AVA+ FW DRK KAR W NRA+TL P++GD WA YY FELQ GTE Q DVL R
Sbjct: 141 KSSDALKKCDHDPHVIAAVAKLFWHDRKVDKARNWLNRAVTLAPDIGDFWALYYKFELQHGTEENQKDVLKR 212
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match:
A0A7S2C6C9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2C6C9_9DINO)
HSP 1 Score: 106 bits (264), Expect = 1.810e-26
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 222
KS++ALK+C+ND HVI AVA+ FW D K AKARKWFNRA+TL+P +GDAW AY AFEL+ GT EQ +V+ + V
Sbjct: 111 KSVDALKKCENDAHVIVAVAKLFWRDAKNAKARKWFNRAVTLNPRLGDAWGAYLAFELEHGTAHEQREVIRKCV 184
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match:
A0A7S3XY73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY73_HETAK)
HSP 1 Score: 110 bits (274), Expect = 2.070e-26
Identity = 51/74 (68.92%), Postives = 61/74 (82.43%), Query Frame = 1
Query: 1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 222
+S+EALKRCDNDPHV+ AVAR F +DRK+AKARKWF RA+ L P +GDAWA +YAFEL+QGT EQ VL+R V
Sbjct: 606 RSVEALKRCDNDPHVVLAVARLFASDRKHAKARKWFERAVALRPGLGDAWARFYAFELRQGTPEEQRAVLDRCV 679
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match:
A0A2R6QX31_ACTCC (Uncharacterized protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QX31_ACTCC)
HSP 1 Score: 107 bits (266), Expect = 3.200e-26
Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 222
KS++ALK+CD+DPHVI AVA+ FW DRK KAR W NRA+TL P++GD WA YY FELQ GTE Q DVL R +
Sbjct: 217 KSMDALKKCDHDPHVIAAVAKLFWHDRKVDKARNWLNRAVTLAPDIGDFWALYYKFELQHGTEDNQKDVLKRCI 290
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match:
A0A7S3RVD0_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RVD0_9SPIT)
HSP 1 Score: 104 bits (259), Expect = 3.410e-26
Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 222
KS++ALK+C+ND HVI AVA+ FW D K AKARKWFNRA+TL+P +GDAW AY AFE++ GT EQ +V+ + V
Sbjct: 113 KSVDALKKCENDAHVIIAVAKLFWKDNKTAKARKWFNRAVTLNPRLGDAWGAYLAFEMEFGTAHEQREVIRKCV 186
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90 )
Total hits: 25
0 1 Expect = 1.02e-41 / Id = 95.95 Expect = 1.72e-40 / Id = 95.95 Expect = 3.05e-29 / Id = 75.68 Expect = 2.78e-27 / Id = 64.86 Expect = 8.25e-27 / Id = 66.22 Expect = 1.07e-26 / Id = 66.67 Expect = 1.81e-26 / Id = 63.51 Expect = 2.07e-26 / Id = 68.92 Expect = 3.20e-26 / Id = 64.86 Expect = 3.41e-26 / Id = 62.16 Sequence A0A6H5KYH2_9PHAE D7FHD2_ECTSI A0A835YM25_9STRA A0A438KFT4_VITVI A0A2P6NJY6_9EUKA A0A7C9DKB5_OPUST A0A7S2C6C9_9DINO A0A7S3XY73_HETAK A0A2R6QX31_ACTCC A0A7S3RVD0_9SPIT
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 151.0
Seed ortholog evalue 2.2e-34
Seed eggNOG ortholog 2880.D7FHD2
KEGG ko ko:K12855
KEGG Pathway ko03040,map03040
KEGG Module M00354
Hectar predicted targeting category other localisation
GOs GO:0000244,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0003824,GO:0004553,GO:0004565,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005682,GO:0005684,GO:0005737,GO:0005773,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006403,GO:0006725,GO:0006807,GO:0006950,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008380,GO:0009266,GO:0009409,GO:0009628,GO:0009791,GO:0009845,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0015030,GO:0015925,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0016607,GO:0016787,GO:0016798,GO:0019219,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030312,GO:0030532,GO:0031047,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0034622,GO:0034641,GO:0035257,GO:0035258,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046540,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050681,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051427,GO:0060147,GO:0060148,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0065003,GO:0065007,GO:0070013,GO:0070920,GO:0071005,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0080188,GO:0090304,GO:0090351,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:0140110,GO:1901360,GO:1901363,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1903798,GO:1903800,GO:1990904,GO:2000112,GO:2000628,GO:2000630,GO:2000634,GO:2000636,GO:2000637,GO:2001141
EggNOG free text desc. spliceosomal tri-snRNP complex assembly
EggNOG OGs KOG0495@1,KOG0495@2759
COG Functional cat. A
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko03041
Exons 1
Model size 222
Cds size 222
Stop 0
Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816631.7949-CDS-M-pyrifera_M_contig73454:749..971 1622816631.7949-CDS-M-pyrifera_M_contig73454:749..971 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig73454 750..971 +
1692278088.3036013-CDS-M-pyrifera_M_contig73454:749..971 1692278088.3036013-CDS-M-pyrifera_M_contig73454:749..971 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig73454 750..971 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73454.17415.1
>prot_M-pyrifera_M_contig73454.17415.1 ID=prot_M-pyrifera_M_contig73454.17415.1|Name=mRNA_M-pyrifera_M_contig73454.17415.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp
KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAW AAYYAFELQQGTEVEQADVLNRFV back to top mRNA from alignment at M-pyrifera_M_contig73454:750..971+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73454.17415.1 ID=mRNA_M-pyrifera_M_contig73454.17415.1|Name=mRNA_M-pyrifera_M_contig73454.17415.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=222bp|location=Sequence derived from alignment at M-pyrifera_M_contig73454:750..971+ (Macrocystis pyrifera P11B4 male)AAGTCGCTGGAGGCGCTGAAGAGGTGCGACAACGACCCGCACGTGATCAC
CGCGGTGGCGAGACGGTTCTGGGCCGACCGGAAGTACGCCAAGGCCCGCA
AGTGGTTCAACCGCGCCATCACCCTGGACCCCAACATGGGAGACGCGTGG
GCGGCGTACTACGCGTTCGAGTTGCAGCAGGGGACGGAGGTGGAGCAGGC
GGATGTTCTGAATAGGTTCGTA back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73454:750..971+
>mRNA_M-pyrifera_M_contig73454.17415.1 ID=mRNA_M-pyrifera_M_contig73454.17415.1|Name=mRNA_M-pyrifera_M_contig73454.17415.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig73454:750..971+ (Macrocystis pyrifera P11B4 male) AAGTCGCTGGAGGCGCTGAAGAGGTGCGACAACGACCCGCACGTGATCAC CGCGGTGGCGAGACGGTTCTGGGCCGACCGGAAGTACGCCAAGGCCCGCA AGTGGTTCAACCGCGCCATCACCCTGGACCCCAACATGGGAGACGCGTGG GCGGCGTACTACGCGTTCGAGTTGCAGCAGGGGACGGAGGTGGAGCAGGC GGATGTTCTGAATAGGTTCGTAAAGTCGCTGGAGGCGCTGAAGAGGTGCG ACAACGACCCGCACGTGATCACCGCGGTGGCGAGACGGTTCTGGGCCGAC CGGAAGTACGCCAAGGCCCGCAAGTGGTTCAACCGCGCCATCACCCTGGA CCCCAACATGGGAGACGCGTGGGCGGCGTACTACGCGTTCGAGTTGCAGC AGGGGACGGAGGTGGAGCAGGCGGATGTTCTGAATAGGTTCGTA back to top