prot_M-pyrifera_M_contig73454.17415.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73454.17415.1
Unique Nameprot_M-pyrifera_M_contig73454.17415.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length74
Homology
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match: A0A6H5KYH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH2_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.020e-41
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0
Query:    1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 74
            KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQ DVL+R V
Sbjct:  341 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCV 414          
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.720e-40
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0
Query:    1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 74
            KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQ DVL+R V
Sbjct:  702 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCV 775          
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match: A0A835YM25_9STRA (PRP1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM25_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.050e-29
Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 74
            KS+EALKRCDNDPHVITAVAR F  DRKY KARKWFNRA+ LD + GDAWAA++AFELQQGT  +QADV+ R V
Sbjct:  702 KSVEALKRCDNDPHVITAVARLFEKDRKYPKARKWFNRAVALDADNGDAWAAFFAFELQQGTAEQQADVIARCV 775          
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match: A0A438KFT4_VITVI (Protein STABILIZED 1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438KFT4_VITVI)

HSP 1 Score: 105 bits (262), Expect = 2.780e-27
Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 74
            KSL+ALK+CD+DPHVI AVA+ FW DRK  KAR W NRA+TL P++GD WA YY FE+Q G+E  Q DVL R V
Sbjct:   39 KSLDALKKCDHDPHVIAAVAKLFWHDRKVDKARTWLNRAVTLAPDIGDFWALYYKFEVQHGSEENQKDVLRRCV 112          
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match: A0A2P6NJY6_9EUKA (PRP1_N domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NJY6_9EUKA)

HSP 1 Score: 111 bits (277), Expect = 8.250e-27
Identity = 49/74 (66.22%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 74
            KS++ALKRCDNDP VI AVA+ FWADRKY K R WFNRA+TL+P++GDAWA +Y FE+Q GTE  Q ++L R V
Sbjct:  862 KSVDALKRCDNDPFVIVAVAKVFWADRKYEKTRTWFNRAVTLNPDLGDAWAYFYKFEIQHGTEEHQQELLKRCV 935          
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match: A0A7C9DKB5_OPUST (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DKB5_OPUST)

HSP 1 Score: 105 bits (262), Expect = 1.070e-26
Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNR 72
            KS +ALK+CD+DPHVI AVA+ FW DRK  KAR W NRA+TL P++GD WA YY FELQ GTE  Q DVL R
Sbjct:  141 KSSDALKKCDHDPHVIAAVAKLFWHDRKVDKARNWLNRAVTLAPDIGDFWALYYKFELQHGTEENQKDVLKR 212          
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match: A0A7S2C6C9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2C6C9_9DINO)

HSP 1 Score: 106 bits (264), Expect = 1.810e-26
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 74
            KS++ALK+C+ND HVI AVA+ FW D K AKARKWFNRA+TL+P +GDAW AY AFEL+ GT  EQ +V+ + V
Sbjct:  111 KSVDALKKCENDAHVIVAVAKLFWRDAKNAKARKWFNRAVTLNPRLGDAWGAYLAFELEHGTAHEQREVIRKCV 184          
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match: A0A7S3XY73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY73_HETAK)

HSP 1 Score: 110 bits (274), Expect = 2.070e-26
Identity = 51/74 (68.92%), Postives = 61/74 (82.43%), Query Frame = 0
Query:    1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 74
            +S+EALKRCDNDPHV+ AVAR F +DRK+AKARKWF RA+ L P +GDAWA +YAFEL+QGT  EQ  VL+R V
Sbjct:  606 RSVEALKRCDNDPHVVLAVARLFASDRKHAKARKWFERAVALRPGLGDAWARFYAFELRQGTPEEQRAVLDRCV 679          
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match: A0A2R6QX31_ACTCC (Uncharacterized protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QX31_ACTCC)

HSP 1 Score: 107 bits (266), Expect = 3.200e-26
Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 74
            KS++ALK+CD+DPHVI AVA+ FW DRK  KAR W NRA+TL P++GD WA YY FELQ GTE  Q DVL R +
Sbjct:  217 KSMDALKKCDHDPHVIAAVAKLFWHDRKVDKARNWLNRAVTLAPDIGDFWALYYKFELQHGTEDNQKDVLKRCI 290          
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Match: A0A7S3RVD0_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RVD0_9SPIT)

HSP 1 Score: 104 bits (259), Expect = 3.410e-26
Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    1 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQADVLNRFV 74
            KS++ALK+C+ND HVI AVA+ FW D K AKARKWFNRA+TL+P +GDAW AY AFE++ GT  EQ +V+ + V
Sbjct:  113 KSVDALKKCENDAHVIIAVAKLFWKDNKTAKARKWFNRAVTLNPRLGDAWGAYLAFEMEFGTAHEQREVIRKCV 186          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73454.17415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYH2_9PHAE1.020e-4195.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHD2_ECTSI1.720e-4095.95PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YM25_9STRA3.050e-2975.68PRP1_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A438KFT4_VITVI2.780e-2764.86Protein STABILIZED 1 n=1 Tax=Vitis vinifera TaxID=... [more]
A0A2P6NJY6_9EUKA8.250e-2766.22PRP1_N domain-containing protein n=1 Tax=Planoprot... [more]
A0A7C9DKB5_OPUST1.070e-2666.67Uncharacterized protein (Fragment) n=1 Tax=Opuntia... [more]
A0A7S2C6C9_9DINO1.810e-2663.51Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S3XY73_HETAK2.070e-2668.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2R6QX31_ACTCC3.200e-2664.86Uncharacterized protein n=1 Tax=Actinidia chinensi... [more]
A0A7S3RVD0_9SPIT3.410e-2662.16Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 3..74
e-value: 3.3E-9
score: 38.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..72
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..73
IPR027108Pre-mRNA-processing factor 6/Prp1/STA1PANTHERPTHR11246:SF1PRE-MRNA-PROCESSING FACTOR 6coord: 1..73
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 13..46
score: 8.821

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73454contigM-pyrifera_M_contig73454:750..971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73454.17415.1mRNA_M-pyrifera_M_contig73454.17415.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73454 750..971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73454.17415.1 ID=prot_M-pyrifera_M_contig73454.17415.1|Name=mRNA_M-pyrifera_M_contig73454.17415.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp
KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAW
AAYYAFELQQGTEVEQADVLNRFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR027108Prp6/Prp1/STA1
IPR019734TPR_repeat